RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 EYA1Q99502 592 aa4.26□□□□□ -1.73
SNRNP40-207ENST00000491106 ADGRG1Q9Y653 693 aa4.26□□□□□ -1.73
SNRNP40-207ENST00000491106 APLP1P51693 650 aa4.25□□□□□ -1.73
SNRNP40-207ENST00000491106 MTRQ99707 1265 aa4.25□□□□□ -1.73
SNRNP40-207ENST00000491106 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.24□□□□□ -1.73
SNRNP40-207ENST00000491106 CFHP08603 1231 aa4.24□□□□□ -1.73
SNRNP40-207ENST00000491106 FECHP22830 423 aa4.24□□□□□ -1.73
SNRNP40-207ENST00000491106 NLRP7Q8WX94 980 aa4.24□□□□□ -1.73
SNRNP40-207ENST00000491106 ZNF516Q92618 1163 aa4.24□□□□□ -1.73
SNRNP40-207ENST00000491106 IRX2Q9BZI1 471 aaPredicted RBP4.24□□□□□ -1.73
SNRNP40-207ENST00000491106 A0A0G2JS52 829 aa4.23□□□□□ -1.73
SNRNP40-207ENST00000491106 TTC13Q8NBP0 860 aa4.23□□□□□ -1.73
SNRNP40-207ENST00000491106 TMEM134Q9H6X4 195 aa4.23□□□□□ -1.73
SNRNP40-207ENST00000491106 NR1I2O75469 434 aa4.22□□□□□ -1.73
SNRNP40-207ENST00000491106 TJAP1Q5JTD0 557 aa4.22□□□□□ -1.73
SNRNP40-207ENST00000491106 PPP1R18Q6NYC8 613 aa4.22□□□□□ -1.73
SNRNP40-207ENST00000491106 BLOC1S3Q6QNY0 202 aa4.22□□□□□ -1.73
SNRNP40-207ENST00000491106 METTL3Q86U44 580 aaKnown RBP4.22□□□□□ -1.73
SNRNP40-207ENST00000491106 NKX2-3Q8TAU0 364 aa4.22□□□□□ -1.73
SNRNP40-207ENST00000491106 DAXXQ9UER7 740 aaPredicted RBP4.22□□□□□ -1.73
SNRNP40-207ENST00000491106 ATP1B4Q9UN42 357 aaPredicted RBP4.22□□□□□ -1.73
SNRNP40-207ENST00000491106 ZPR1O75312 459 aa4.21□□□□□ -1.74
SNRNP40-207ENST00000491106 ITGBL1O95965 494 aaPredicted RBP4.21□□□□□ -1.74
SNRNP40-207ENST00000491106 PUS10Q3MIT2 529 aaKnown RBP4.21□□□□□ -1.74
SNRNP40-207ENST00000491106 GRIPAP1Q4V328 841 aa4.21□□□□□ -1.74
SNRNP40-207ENST00000491106 IFFO2Q5TF58 517 aa4.21□□□□□ -1.74
SNRNP40-207ENST00000491106 SULF1Q8IWU6 871 aa4.21□□□□□ -1.74
SNRNP40-207ENST00000491106 PXYLP1Q8TE99 480 aa4.21□□□□□ -1.74
SNRNP40-207ENST00000491106 PRKD2Q9BZL6 878 aa4.21□□□□□ -1.74
SNRNP40-207ENST00000491106 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.21□□□□□ -1.74
SNRNP40-207ENST00000491106 RGS20O76081 388 aa4.2□□□□□ -1.74
SNRNP40-207ENST00000491106 ACTN4O43707 911 aaKnown RBP4.19□□□□□ -1.74
SNRNP40-207ENST00000491106 GFRA3O60609 400 aa4.19□□□□□ -1.74
SNRNP40-207ENST00000491106 MDM2Q00987 491 aaPredicted RBP4.19□□□□□ -1.74
SNRNP40-207ENST00000491106 LMOD2Q6P5Q4 547 aa4.19□□□□□ -1.74
SNRNP40-207ENST00000491106 Q6ZNB5 142 aa4.19□□□□□ -1.74
SNRNP40-207ENST00000491106 SCUBE3Q8IX30 993 aa4.19□□□□□ -1.74
SNRNP40-207ENST00000491106 MINK1Q8N4C8 1332 aaPredicted RBP4.19□□□□□ -1.74
SNRNP40-207ENST00000491106 PPEF1O14829 653 aaPredicted RBP4.18□□□□□ -1.74
SNRNP40-207ENST00000491106 IRF6O14896 467 aa4.18□□□□□ -1.74
SNRNP40-207ENST00000491106 SLC10A3P09131 477 aa4.18□□□□□ -1.74
SNRNP40-207ENST00000491106 ATP6V1AP38606 617 aa4.18□□□□□ -1.74
SNRNP40-207ENST00000491106 TTLL12Q14166 644 aaPredicted RBP4.18□□□□□ -1.74
SNRNP40-207ENST00000491106 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.18□□□□□ -1.74
SNRNP40-207ENST00000491106 NUTM1Q86Y26 1132 aa4.18□□□□□ -1.74
SNRNP40-207ENST00000491106 SPSB2Q99619 263 aa4.18□□□□□ -1.74
SNRNP40-207ENST00000491106 SLC6A16Q9GZN6 736 aa4.18□□□□□ -1.74
SNRNP40-207ENST00000491106 ZBTB24O43167 697 aaPredicted RBP4.17□□□□□ -1.74
SNRNP40-207ENST00000491106 FUT2Q10981 343 aa4.17□□□□□ -1.74
SNRNP40-207ENST00000491106 MAP2K5Q13163 448 aa4.17□□□□□ -1.74
SNRNP40-207ENST00000491106 TLL1O43897 1013 aa4.16□□□□□ -1.74
SNRNP40-207ENST00000491106 FMNL1O95466 1100 aaPredicted RBP4.16□□□□□ -1.74
SNRNP40-207ENST00000491106 S1PR4O95977 384 aa4.16□□□□□ -1.74
SNRNP40-207ENST00000491106 SLC19A1P41440 591 aa4.16□□□□□ -1.74
SNRNP40-207ENST00000491106 TMUB1Q9BVT8 246 aa4.16□□□□□ -1.74
SNRNP40-207ENST00000491106 CLCN1P35523 988 aa4.15□□□□□ -1.75
SNRNP40-207ENST00000491106 GCGRP47871 477 aa4.15□□□□□ -1.75
SNRNP40-207ENST00000491106 CCDC24Q8N4L8 307 aa4.15□□□□□ -1.75
SNRNP40-207ENST00000491106 CCDC102AQ96A19 550 aa4.15□□□□□ -1.75
SNRNP40-207ENST00000491106 PHOX2BQ99453 314 aa4.15□□□□□ -1.75
SNRNP40-207ENST00000491106 PDZRN3Q9UPQ7 1066 aa4.15□□□□□ -1.75
SNRNP40-207ENST00000491106 RNF223E7ERA6 249 aa4.14□□□□□ -1.75
SNRNP40-207ENST00000491106 KDM4AO75164 1064 aa4.14□□□□□ -1.75
SNRNP40-207ENST00000491106 CD2BP2O95400 341 aaKnown RBP4.14□□□□□ -1.75
SNRNP40-207ENST00000491106 ADH1BP00325 375 aa4.14□□□□□ -1.75
SNRNP40-207ENST00000491106 FOXC1Q12948 553 aa4.14□□□□□ -1.75
SNRNP40-207ENST00000491106 LAPTM4AQ15012 233 aa4.14□□□□□ -1.75
SNRNP40-207ENST00000491106 Q3C1V9 767 aa4.14□□□□□ -1.75
SNRNP40-207ENST00000491106 SLC27A5Q9Y2P5 690 aa4.14□□□□□ -1.75
SNRNP40-207ENST00000491106 SSTR3P32745 418 aaPredicted RBP4.13□□□□□ -1.75
SNRNP40-207ENST00000491106 ZC3H15Q8WU90 426 aaKnown RBP4.13□□□□□ -1.75
SNRNP40-207ENST00000491106 GPCPD1Q9NPB8 672 aa4.13□□□□□ -1.75
SNRNP40-207ENST00000491106 C6orf229H3BNL8 230 aa4.12□□□□□ -1.75
SNRNP40-207ENST00000491106 GPR37O15354 613 aa4.12□□□□□ -1.75
SNRNP40-207ENST00000491106 MORN1Q5T089 497 aa4.12□□□□□ -1.75
SNRNP40-207ENST00000491106 V9GY48 417 aaPredicted RBP4.12□□□□□ -1.75
SNRNP40-207ENST00000491106 TNFRSF10AO00220 468 aa4.11□□□□□ -1.75
SNRNP40-207ENST00000491106 PKDCCQ504Y2 493 aa4.11□□□□□ -1.75
SNRNP40-207ENST00000491106 ANKLE1Q8NAG6 615 aa4.11□□□□□ -1.75
SNRNP40-207ENST00000491106 SLC24A1O60721 1099 aa4.1□□□□□ -1.75
SNRNP40-207ENST00000491106 CD46P15529 392 aa4.1□□□□□ -1.75
SNRNP40-207ENST00000491106 USP46P62068 366 aa4.1□□□□□ -1.75
SNRNP40-207ENST00000491106 ZNF697Q5TEC3 545 aa4.1□□□□□ -1.75
SNRNP40-207ENST00000491106 TRAF7Q6Q0C0 670 aa4.1□□□□□ -1.75
SNRNP40-207ENST00000491106 BARGINQ6ZT62 677 aa4.1□□□□□ -1.75
SNRNP40-207ENST00000491106 TSC1Q92574 1164 aa4.1□□□□□ -1.75
SNRNP40-207ENST00000491106 BCANQ96GW7 911 aa4.1□□□□□ -1.75
SNRNP40-207ENST00000491106 AK7Q96M32 723 aa4.1□□□□□ -1.75
SNRNP40-207ENST00000491106 FCF1Q9Y324 198 aaKnown RBP4.1□□□□□ -1.75
SNRNP40-207ENST00000491106 TTC24A2A3L6 582 aaPredicted RBP4.09□□□□□ -1.75
SNRNP40-207ENST00000491106 ZMYND10O75800 440 aa4.09□□□□□ -1.75
SNRNP40-207ENST00000491106 CSPP1Q1MSJ5 1256 aa4.09□□□□□ -1.75
SNRNP40-207ENST00000491106 SPRYD7Q5W111 196 aa4.09□□□□□ -1.75
SNRNP40-207ENST00000491106 LIAT1Q6ZQX7 453 aa4.09□□□□□ -1.75
SNRNP40-207ENST00000491106 ZNF598Q86UK7 904 aaKnown RBP4.09□□□□□ -1.75
SNRNP40-207ENST00000491106 USB1Q9BQ65 265 aaKnown RBP4.09□□□□□ -1.75
SNRNP40-207ENST00000491106 BEGAINQ9BUH8 593 aa4.09□□□□□ -1.75
SNRNP40-207ENST00000491106 FAM187AA6NFU0 413 aa4.08□□□□□ -1.76
SNRNP40-207ENST00000491106 NUTM2BA6NNL0 878 aaPredicted RBP4.08□□□□□ -1.76
SNRNP40-207ENST00000491106 NUTM2EB1AL46 878 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms