RNA–Protein interactions for RNA: ENST00000490832.1

FNDC3B-211, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 772 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-211ENST00000490832 PHOX2BQ99453 314 aa14.19□□□□□ -0.14
FNDC3B-211ENST00000490832 GPBP1L1Q9HC44 474 aaPredicted RBP14.19□□□□□ -0.14
FNDC3B-211ENST00000490832 PNMA3Q9UL41 463 aa14.19□□□□□ -0.14
FNDC3B-211ENST00000490832 PARP9Q8IXQ6 854 aa14.18□□□□□ -0.14
FNDC3B-211ENST00000490832 KIAA1468Q9P260 1216 aa14.18□□□□□ -0.14
FNDC3B-211ENST00000490832 RABGEF1Q9UJ41 708 aa14.18□□□□□ -0.14
FNDC3B-211ENST00000490832 CLCN1P35523 988 aa14.17□□□□□ -0.14
FNDC3B-211ENST00000490832 EYA1Q99502 592 aa14.17□□□□□ -0.14
FNDC3B-211ENST00000490832 KDM4CQ9H3R0 1056 aa14.17□□□□□ -0.14
FNDC3B-211ENST00000490832 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.16□□□□□ -0.14
FNDC3B-211ENST00000490832 TK2O00142 265 aa14.16□□□□□ -0.14
FNDC3B-211ENST00000490832 VPS9D1Q9Y2B5 631 aa14.16□□□□□ -0.14
FNDC3B-211ENST00000490832 CFTRP13569 1480 aa14.16□□□□□ -0.14
FNDC3B-211ENST00000490832 GPCPD1Q9NPB8 672 aa14.15□□□□□ -0.14
FNDC3B-211ENST00000490832 C3orf80F5H4A9 247 aa14.14□□□□□ -0.15
FNDC3B-211ENST00000490832 LSM11P83369 360 aaKnown RBP eCLIP14.14□□□□□ -0.15
FNDC3B-211ENST00000490832 MDM2Q00987 491 aaPredicted RBP14.14□□□□□ -0.15
FNDC3B-211ENST00000490832 RCCD1A6NED2 376 aa14.12□□□□□ -0.15
FNDC3B-211ENST00000490832 DNAJB2P25686 324 aa14.12□□□□□ -0.15
FNDC3B-211ENST00000490832 GIGYF2Q6Y7W6 1299 aaKnown RBP14.12□□□□□ -0.15
FNDC3B-211ENST00000490832 TMUB1Q9BVT8 246 aa14.12□□□□□ -0.15
FNDC3B-211ENST00000490832 SMAPO00193 183 aa14.11□□□□□ -0.15
FNDC3B-211ENST00000490832 URB2Q14146 1524 aaKnown RBP14.1□□□□□ -0.15
FNDC3B-211ENST00000490832 NLRP7Q8WX94 980 aa14.1□□□□□ -0.15
FNDC3B-211ENST00000490832 NBPF3Q9H094 633 aa14.1□□□□□ -0.15
FNDC3B-211ENST00000490832 ADGRD1Q6QNK2 874 aa14.09□□□□□ -0.15
FNDC3B-211ENST00000490832 REPIN1Q9BWE0 567 aaKnown RBP14.09□□□□□ -0.15
FNDC3B-211ENST00000490832 DAXXQ9UER7 740 aaPredicted RBP14.09□□□□□ -0.15
FNDC3B-211ENST00000490832 TMEM132AQ24JP5 1023 aa14.08□□□□□ -0.16
FNDC3B-211ENST00000490832 SEPT9Q9UHD8 586 aaPredicted RBP14.07□□□□□ -0.16
FNDC3B-211ENST00000490832 CCDC88BA6NC98 1476 aa14.06□□□□□ -0.16
FNDC3B-211ENST00000490832 BHMG1C9JSJ3 638 aaPredicted RBP14.06□□□□□ -0.16
FNDC3B-211ENST00000490832 LAPTM4BQ86VI4 370 aa14.06□□□□□ -0.16
FNDC3B-211ENST00000490832 TMEM134Q9H6X4 195 aa14.06□□□□□ -0.16
FNDC3B-211ENST00000490832 FAM98CQ17RN3 349 aaKnown RBP14.05□□□□□ -0.16
FNDC3B-211ENST00000490832 POTEGQ6S5H5 508 aa14.04□□□□□ -0.16
FNDC3B-211ENST00000490832 DDRGK1Q96HY6 314 aa14.04□□□□□ -0.16
FNDC3B-211ENST00000490832 FAM217BQ9NTX9 383 aaPredicted RBP14.04□□□□□ -0.16
FNDC3B-211ENST00000490832 ANKRD13DQ6ZTN6 518 aa14.03□□□□□ -0.16
FNDC3B-211ENST00000490832 PRDM2Q13029 1718 aa14.02□□□□□ -0.16
FNDC3B-211ENST00000490832 POTEMA6NI47 508 aa14.02□□□□□ -0.17
FNDC3B-211ENST00000490832 MS4A1P11836 297 aa14.02□□□□□ -0.17
FNDC3B-211ENST00000490832 SSTR3P32745 418 aaPredicted RBP14.02□□□□□ -0.17
FNDC3B-211ENST00000490832 HRO43593 1189 aa14.01□□□□□ -0.17
FNDC3B-211ENST00000490832 MRPL50Q8N5N7 158 aaKnown RBP14.01□□□□□ -0.17
FNDC3B-211ENST00000490832 KRTAP3-3Q9BYR6 98 aa14.01□□□□□ -0.17
FNDC3B-211ENST00000490832 KRTAP3-2Q9BYR7 98 aa14.01□□□□□ -0.17
FNDC3B-211ENST00000490832 FAM117AQ9C073 453 aa14.01□□□□□ -0.17
FNDC3B-211ENST00000490832 SULF1Q8IWU6 871 aa14□□□□□ -0.17
FNDC3B-211ENST00000490832 HDGFP51858 240 aaKnown RBP13.99□□□□□ -0.17
FNDC3B-211ENST00000490832 IL27Q8NEV9 243 aa13.98□□□□□ -0.17
FNDC3B-211ENST00000490832 STAC3Q96MF2 364 aa13.98□□□□□ -0.17
FNDC3B-211ENST00000490832 SWT1Q5T5J6 900 aaKnown RBP13.96□□□□□ -0.17
FNDC3B-211ENST00000490832 ZNF608Q9ULD9 1512 aaPredicted RBP13.95□□□□□ -0.18
FNDC3B-211ENST00000490832 SLC4A3P48751 1232 aa13.95□□□□□ -0.18
FNDC3B-211ENST00000490832 CDAN1Q8IWY9 1227 aa13.95□□□□□ -0.18
FNDC3B-211ENST00000490832 ZFRQ96KR1 1074 aaKnown RBP13.95□□□□□ -0.18
FNDC3B-211ENST00000490832 DDX11L8A8MPP1 907 aa13.94□□□□□ -0.18
FNDC3B-211ENST00000490832 BEGAINQ9BUH8 593 aa13.94□□□□□ -0.18
FNDC3B-211ENST00000490832 TOPBP1Q92547 1522 aa13.94□□□□□ -0.18
FNDC3B-211ENST00000490832 PLEKHG3A1L390 1219 aa13.93□□□□□ -0.18
FNDC3B-211ENST00000490832 SAMD7Q7Z3H4 446 aa13.93□□□□□ -0.18
FNDC3B-211ENST00000490832 GOLGA8CPA6NN73 597 aa13.92□□□□□ -0.18
FNDC3B-211ENST00000490832 CD46P15529 392 aa13.92□□□□□ -0.18
FNDC3B-211ENST00000490832 RSPH4AQ5TD94 716 aa13.92□□□□□ -0.18
FNDC3B-211ENST00000490832 SLF2Q8IX21 1173 aa13.92□□□□□ -0.18
FNDC3B-211ENST00000490832 RDH13Q8NBN7 331 aa13.9□□□□□ -0.18
FNDC3B-211ENST00000490832 IFT140Q96RY7 1462 aa13.89□□□□□ -0.19
FNDC3B-211ENST00000490832 ANKK1Q8NFD2 765 aa13.88□□□□□ -0.19
FNDC3B-211ENST00000490832 LRCH3Q96II8 777 aa13.88□□□□□ -0.19
FNDC3B-211ENST00000490832 DIXDC1Q155Q3 683 aa13.86□□□□□ -0.19
FNDC3B-211ENST00000490832 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.86□□□□□ -0.19
FNDC3B-211ENST00000490832 DNMBPQ6XZF7 1577 aa13.86□□□□□ -0.19
FNDC3B-211ENST00000490832 RNF40O75150 1001 aa13.85□□□□□ -0.19
FNDC3B-211ENST00000490832 NECTIN2Q92692 538 aa13.85□□□□□ -0.19
FNDC3B-211ENST00000490832 RSPH6AQ9H0K4 717 aa13.85□□□□□ -0.19
FNDC3B-211ENST00000490832 GOPCQ9HD26 462 aa13.85□□□□□ -0.19
FNDC3B-211ENST00000490832 EIF4G3O43432 1585 aaKnown RBP13.84□□□□□ -0.19
FNDC3B-211ENST00000490832 SLC10A3P09131 477 aa13.84□□□□□ -0.19
FNDC3B-211ENST00000490832 WNT2BQ93097 391 aa13.83□□□□□ -0.2
FNDC3B-211ENST00000490832 AQRO60306 1485 aaKnown RBP eCLIP13.82□□□□□ -0.24e-10■■■■■ 53.6
FNDC3B-211ENST00000490832 SH3D19Q5HYK7 790 aa13.82□□□□□ -0.2
FNDC3B-211ENST00000490832 SOWAHBA6NEL2 793 aa13.81□□□□□ -0.2
FNDC3B-211ENST00000490832 NUTM1Q86Y26 1132 aa13.81□□□□□ -0.2
FNDC3B-211ENST00000490832 ABCC8Q09428 1581 aa13.8□□□□□ -0.2
FNDC3B-211ENST00000490832 RIMBP3CA6NJZ7 1639 aa13.8□□□□□ -0.2
FNDC3B-211ENST00000490832 RIMBP3BA6NNM3 1639 aa13.8□□□□□ -0.2
FNDC3B-211ENST00000490832 TARBP1Q13395 1621 aaKnown RBP13.8□□□□□ -0.2
FNDC3B-211ENST00000490832 RIMBP3Q9UFD9 1639 aa13.8□□□□□ -0.2
FNDC3B-211ENST00000490832 GCGRP47871 477 aa13.8□□□□□ -0.2
FNDC3B-211ENST00000490832 TBC1D2Q9BYX2 928 aa13.8□□□□□ -0.2
FNDC3B-211ENST00000490832 POLA1P09884 1462 aaPredicted RBP13.8□□□□□ -0.2
FNDC3B-211ENST00000490832 SPIRE2Q8WWL2 714 aa13.79□□□□□ -0.2
FNDC3B-211ENST00000490832 PCDH10Q9P2E7 1040 aa13.79□□□□□ -0.2
FNDC3B-211ENST00000490832 RAD54L2Q9Y4B4 1467 aa13.79□□□□□ -0.2
FNDC3B-211ENST00000490832 CFHP08603 1231 aa13.78□□□□□ -0.2
FNDC3B-211ENST00000490832 CHD1O14646 1710 aa13.77□□□□□ -0.21
FNDC3B-211ENST00000490832 KDM4AO75164 1064 aa13.77□□□□□ -0.21
FNDC3B-211ENST00000490832 BCAMP50895 628 aa13.77□□□□□ -0.21
FNDC3B-211ENST00000490832 SKIV2LQ15477 1246 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms