RNA–Protein interactions for RNA: ENST00000490615.1

SHTN1-205, Transcript of shootin 1, humanhuman

TSL 3

Gene SHTN1, Length 358 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-205ENST00000490615 RSPH6AQ9H0K4 717 aa8.42□□□□□ -1.06
SHTN1-205ENST00000490615 UBTFP17480 764 aaKnown RBP8.41□□□□□ -1.06
SHTN1-205ENST00000490615 PBX2P40425 430 aa8.41□□□□□ -1.06
SHTN1-205ENST00000490615 SLC4A5Q9BY07 1137 aa8.41□□□□□ -1.06
SHTN1-205ENST00000490615 RABGEF1Q9UJ41 708 aa8.41□□□□□ -1.06
SHTN1-205ENST00000490615 DDX11L8A8MPP1 907 aa8.4□□□□□ -1.06
SHTN1-205ENST00000490615 CD46P15529 392 aa8.4□□□□□ -1.06
SHTN1-205ENST00000490615 SKIV2LQ15477 1246 aaKnown RBP8.4□□□□□ -1.06
SHTN1-205ENST00000490615 HS3ST6Q96QI5 342 aa8.4□□□□□ -1.06
SHTN1-205ENST00000490615 POLR3EQ9NVU0 708 aa8.4□□□□□ -1.06
SHTN1-205ENST00000490615 SEPT9Q9UHD8 586 aaPredicted RBP8.4□□□□□ -1.06
SHTN1-205ENST00000490615 VPS9D1Q9Y2B5 631 aa8.4□□□□□ -1.06
SHTN1-205ENST00000490615 SULF1Q8IWU6 871 aa8.39□□□□□ -1.07
SHTN1-205ENST00000490615 TBC1D2Q9BYX2 928 aa8.39□□□□□ -1.07
SHTN1-205ENST00000490615 RANGAP1P46060 587 aaPredicted RBP8.38□□□□□ -1.07
SHTN1-205ENST00000490615 LCE2DQ5TA82 110 aaPredicted RBP8.38□□□□□ -1.07
SHTN1-205ENST00000490615 MYSM1Q5VVJ2 828 aa8.38□□□□□ -1.07
SHTN1-205ENST00000490615 PROCA1Q8NCQ7 364 aaPredicted RBP8.38□□□□□ -1.07
SHTN1-205ENST00000490615 ATP1B4Q9UN42 357 aaPredicted RBP8.37□□□□□ -1.07
SHTN1-205ENST00000490615 SWT1Q5T5J6 900 aaKnown RBP8.36□□□□□ -1.07
SHTN1-205ENST00000490615 SPIRE2Q8WWL2 714 aa8.36□□□□□ -1.07
SHTN1-205ENST00000490615 TRIM26Q12899 539 aaPredicted RBP8.35□□□□□ -1.07
SHTN1-205ENST00000490615 RDH13Q8NBN7 331 aa8.35□□□□□ -1.07
SHTN1-205ENST00000490615 DIXDC1Q155Q3 683 aa8.34□□□□□ -1.07
SHTN1-205ENST00000490615 FAM98CQ17RN3 349 aaKnown RBP8.34□□□□□ -1.07
SHTN1-205ENST00000490615 NUTM1Q86Y26 1132 aa8.34□□□□□ -1.07
SHTN1-205ENST00000490615 BHMG1C9JSJ3 638 aaPredicted RBP8.33□□□□□ -1.08
SHTN1-205ENST00000490615 SLC10A3P09131 477 aa8.33□□□□□ -1.08
SHTN1-205ENST00000490615 CLK2P49760 499 aaKnown RBP8.33□□□□□ -1.08
SHTN1-205ENST00000490615 HDGFP51858 240 aaKnown RBP8.33□□□□□ -1.08
SHTN1-205ENST00000490615 LIMD1Q9UGP4 676 aa8.33□□□□□ -1.08
SHTN1-205ENST00000490615 TK2O00142 265 aa8.32□□□□□ -1.08
SHTN1-205ENST00000490615 RIC3Q7Z5B4 369 aa8.32□□□□□ -1.08
SHTN1-205ENST00000490615 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.32□□□□□ -1.08
SHTN1-205ENST00000490615 ZMYND15Q9H091 742 aa8.32□□□□□ -1.08
SHTN1-205ENST00000490615 MOXD2PA6NHM9 499 aa8.31□□□□□ -1.08
SHTN1-205ENST00000490615 NDUFV2P19404 249 aa8.31□□□□□ -1.08
SHTN1-205ENST00000490615 GCGRP47871 477 aa8.31□□□□□ -1.08
SHTN1-205ENST00000490615 LSM11P83369 360 aaKnown RBP eCLIP8.31□□□□□ -1.08
SHTN1-205ENST00000490615 RSPH4AQ5TD94 716 aa8.31□□□□□ -1.08
SHTN1-205ENST00000490615 SAMD7Q7Z3H4 446 aa8.31□□□□□ -1.08
SHTN1-205ENST00000490615 LAPTM4BQ86VI4 370 aa8.31□□□□□ -1.08
SHTN1-205ENST00000490615 NBPF3Q9H094 633 aa8.31□□□□□ -1.08
SHTN1-205ENST00000490615 SPTLC1O15269 473 aa8.3□□□□□ -1.08
SHTN1-205ENST00000490615 KDM4AO75164 1064 aa8.3□□□□□ -1.08
SHTN1-205ENST00000490615 HRCP23327 699 aa8.3□□□□□ -1.08
SHTN1-205ENST00000490615 ADGRD1Q6QNK2 874 aa8.3□□□□□ -1.08
SHTN1-205ENST00000490615 FBXO31Q5XUX0 539 aaPredicted RBP8.29□□□□□ -1.08
SHTN1-205ENST00000490615 RSBN1LQ6PCB5 846 aaPredicted RBP8.29□□□□□ -1.08
SHTN1-205ENST00000490615 ZFRQ96KR1 1074 aaKnown RBP8.29□□□□□ -1.08
SHTN1-205ENST00000490615 FLIIQ13045 1269 aa8.28□□□□□ -1.08
SHTN1-205ENST00000490615 ANKRD13DQ6ZTN6 518 aa8.28□□□□□ -1.08
SHTN1-205ENST00000490615 SLF2Q8IX21 1173 aa8.28□□□□□ -1.08
SHTN1-205ENST00000490615 MRPL50Q8N5N7 158 aaKnown RBP8.28□□□□□ -1.08
SHTN1-205ENST00000490615 SLC4A3P48751 1232 aa8.27□□□□□ -1.09
SHTN1-205ENST00000490615 CSPP1Q1MSJ5 1256 aa8.27□□□□□ -1.09
SHTN1-205ENST00000490615 PCDHB15Q9Y5E8 787 aa8.27□□□□□ -1.09
SHTN1-205ENST00000490615 HRO43593 1189 aa8.26□□□□□ -1.09
SHTN1-205ENST00000490615 RNF40O75150 1001 aa8.26□□□□□ -1.09
SHTN1-205ENST00000490615 HOXA2O43364 376 aa8.25□□□□□ -1.09
SHTN1-205ENST00000490615 GJA5P36382 358 aa8.25□□□□□ -1.09
SHTN1-205ENST00000490615 RFC5P40937 340 aa8.25□□□□□ -1.09
SHTN1-205ENST00000490615 USP46P62068 366 aa8.25□□□□□ -1.09
SHTN1-205ENST00000490615 TUSC1Q2TAM9 212 aa8.25□□□□□ -1.09
SHTN1-205ENST00000490615 CFHP08603 1231 aa8.24□□□□□ -1.09
SHTN1-205ENST00000490615 QPCTQ16769 361 aa8.24□□□□□ -1.09
SHTN1-205ENST00000490615 PPP2R2DQ66LE6 453 aa8.24□□□□□ -1.09
SHTN1-205ENST00000490615 HLA-CQ95604 372 aa8.24□□□□□ -1.09
SHTN1-205ENST00000490615 LILRB3O75022 631 aa8.23□□□□□ -1.09
SHTN1-205ENST00000490615 FDX1P10109 184 aa8.23□□□□□ -1.09
SHTN1-205ENST00000490615 GUCA2AQ02747 115 aa8.23□□□□□ -1.09
SHTN1-205ENST00000490615 NPM2Q86SE8 214 aaKnown RBP8.23□□□□□ -1.09
SHTN1-205ENST00000490615 LRCH3Q96II8 777 aa8.23□□□□□ -1.09
SHTN1-205ENST00000490615 STAC3Q96MF2 364 aa8.23□□□□□ -1.09
SHTN1-205ENST00000490615 FUT2Q10981 343 aa8.22□□□□□ -1.09
SHTN1-205ENST00000490615 MCM6Q14566 821 aa8.22□□□□□ -1.09
SHTN1-205ENST00000490615 RTL5Q5HYW3 569 aaPredicted RBP8.22□□□□□ -1.09
SHTN1-205ENST00000490615 CABLES1Q8TDN4 633 aa8.22□□□□□ -1.09
SHTN1-205ENST00000490615 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.22□□□□□ -1.09
SHTN1-205ENST00000490615 PCDHGC3Q9UN70 934 aa8.22□□□□□ -1.09
SHTN1-205ENST00000490615 GOLGA8CPA6NN73 597 aa8.21□□□□□ -1.1
SHTN1-205ENST00000490615 NUTM2BA6NNL0 878 aaPredicted RBP8.21□□□□□ -1.1
SHTN1-205ENST00000490615 NUTM2EB1AL46 878 aaPredicted RBP8.21□□□□□ -1.1
SHTN1-205ENST00000490615 TMEM259Q4ZIN3 620 aa8.21□□□□□ -1.1
SHTN1-205ENST00000490615 NUTM2DQ5VT03 806 aaPredicted RBP8.21□□□□□ -1.1
SHTN1-205ENST00000490615 NUTM2AQ8IVF1 878 aaPredicted RBP8.21□□□□□ -1.1
SHTN1-205ENST00000490615 BANK1Q8NDB2 785 aa8.2□□□□□ -1.1
SHTN1-205ENST00000490615 ARID3AQ99856 593 aa8.2□□□□□ -1.1
SHTN1-205ENST00000490615 SNRKQ9NRH2 765 aa8.2□□□□□ -1.1
SHTN1-205ENST00000490615 KMT5BQ4FZB7 885 aa8.19□□□□□ -1.1
SHTN1-205ENST00000490615 GRIPAP1Q4V328 841 aa8.19□□□□□ -1.1
SHTN1-205ENST00000490615 PRPF38BQ5VTL8 546 aaKnown RBP8.19□□□□□ -1.1
SHTN1-205ENST00000490615 ANKK1Q8NFD2 765 aa8.19□□□□□ -1.1
SHTN1-205ENST00000490615 KRTAP3-3Q9BYR6 98 aa8.19□□□□□ -1.1
SHTN1-205ENST00000490615 KRTAP3-2Q9BYR7 98 aa8.19□□□□□ -1.1
SHTN1-205ENST00000490615 ATP6V1AP38606 617 aa8.18□□□□□ -1.1
SHTN1-205ENST00000490615 BCAMP50895 628 aa8.18□□□□□ -1.1
SHTN1-205ENST00000490615 CLUAP1Q96AJ1 413 aa8.18□□□□□ -1.1
SHTN1-205ENST00000490615 ZBTB3Q9H5J0 574 aa8.18□□□□□ -1.1
SHTN1-205ENST00000490615 C1orf115Q9H7X2 142 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms