RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 HDGFP51858 240 aaKnown RBP8.6□□□□□ -1.03
CSTF1-205ENST00000490539 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.6□□□□□ -1.03
CSTF1-205ENST00000490539 LMOD2Q6P5Q4 547 aa8.59□□□□□ -1.03
CSTF1-205ENST00000490539 PADI6Q6TGC4 694 aa8.59□□□□□ -1.03
CSTF1-205ENST00000490539 TSKSQ9UJT2 592 aa8.59□□□□□ -1.03
CSTF1-205ENST00000490539 GNPATO15228 680 aa8.58□□□□□ -1.04
CSTF1-205ENST00000490539 TJAP1Q5JTD0 557 aa8.58□□□□□ -1.04
CSTF1-205ENST00000490539 PNMA3Q9UL41 463 aa8.58□□□□□ -1.04
CSTF1-205ENST00000490539 TATDN2Q93075 761 aa8.57□□□□□ -1.04
CSTF1-205ENST00000490539 V9GY48 417 aaPredicted RBP8.57□□□□□ -1.04
CSTF1-205ENST00000490539 SLC4A3P48751 1232 aa8.56□□□□□ -1.04
CSTF1-205ENST00000490539 NUDT18Q6ZVK8 323 aa8.56□□□□□ -1.04
CSTF1-205ENST00000490539 RBM46Q8TBY0 533 aaKnown RBP8.56□□□□□ -1.04
CSTF1-205ENST00000490539 OATP04181 439 aa8.55□□□□□ -1.04
CSTF1-205ENST00000490539 PPP1R18Q6NYC8 613 aa8.55□□□□□ -1.04
CSTF1-205ENST00000490539 TTC13Q8NBP0 860 aa8.55□□□□□ -1.04
CSTF1-205ENST00000490539 IL21Q9HBE4 155 aa8.55□□□□□ -1.04
CSTF1-205ENST00000490539 ZNF787Q6DD87 383 aa8.54□□□□□ -1.04
CSTF1-205ENST00000490539 MTRQ99707 1265 aa8.53□□□□□ -1.04
CSTF1-205ENST00000490539 SMAPO00193 183 aa8.52□□□□□ -1.05
CSTF1-205ENST00000490539 SOCS7O14512 581 aa8.52□□□□□ -1.05
CSTF1-205ENST00000490539 SAMD7Q7Z3H4 446 aa8.52□□□□□ -1.05
CSTF1-205ENST00000490539 FAM198AQ9UFP1 575 aa8.52□□□□□ -1.05
CSTF1-205ENST00000490539 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.51□□□□□ -1.05
CSTF1-205ENST00000490539 KRI1Q8N9T8 703 aaKnown RBP8.5□□□□□ -1.05
CSTF1-205ENST00000490539 NECTIN2Q92692 538 aa8.5□□□□□ -1.05
CSTF1-205ENST00000490539 PDZRN3Q9UPQ7 1066 aa8.5□□□□□ -1.05
CSTF1-205ENST00000490539 ADGRG1Q9Y653 693 aa8.5□□□□□ -1.05
CSTF1-205ENST00000490539 GPR37O15354 613 aa8.49□□□□□ -1.05
CSTF1-205ENST00000490539 MAP2K5Q13163 448 aa8.49□□□□□ -1.05
CSTF1-205ENST00000490539 RIMBP3CA6NJZ7 1639 aa8.49□□□□□ -1.05
CSTF1-205ENST00000490539 RIMBP3BA6NNM3 1639 aa8.49□□□□□ -1.05
CSTF1-205ENST00000490539 RIMBP3Q9UFD9 1639 aa8.49□□□□□ -1.05
CSTF1-205ENST00000490539 DNAJB2P25686 324 aa8.48□□□□□ -1.05
CSTF1-205ENST00000490539 EYA1Q99502 592 aa8.48□□□□□ -1.05
CSTF1-205ENST00000490539 LMTK3Q96Q04 1460 aa8.48□□□□□ -1.05
CSTF1-205ENST00000490539 MINK1Q8N4C8 1332 aaPredicted RBP8.48□□□□□ -1.05
CSTF1-205ENST00000490539 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.47□□□□□ -1.05
CSTF1-205ENST00000490539 SLF2Q8IX21 1173 aa8.47□□□□□ -1.05
CSTF1-205ENST00000490539 ZC3H15Q8WU90 426 aaKnown RBP8.47□□□□□ -1.05
CSTF1-205ENST00000490539 ZNF516Q92618 1163 aa8.47□□□□□ -1.05
CSTF1-205ENST00000490539 RNF40O75150 1001 aa8.46□□□□□ -1.06
CSTF1-205ENST00000490539 FECHP22830 423 aa8.46□□□□□ -1.06
CSTF1-205ENST00000490539 GGCXP38435 758 aa8.46□□□□□ -1.06
CSTF1-205ENST00000490539 RSPH4AQ5TD94 716 aa8.46□□□□□ -1.06
CSTF1-205ENST00000490539 IRF6O14896 467 aa8.45□□□□□ -1.06
CSTF1-205ENST00000490539 FAM161AQ3B820 660 aa8.45□□□□□ -1.06
CSTF1-205ENST00000490539 METTL3Q86U44 580 aaKnown RBP8.45□□□□□ -1.06
CSTF1-205ENST00000490539 PXYLP1Q8TE99 480 aa8.45□□□□□ -1.06
CSTF1-205ENST00000490539 ZNF775Q96BV0 537 aaPredicted RBP8.45□□□□□ -1.06
CSTF1-205ENST00000490539 RCCD1A6NED2 376 aa8.44□□□□□ -1.06
CSTF1-205ENST00000490539 ZMYND10O75800 440 aa8.44□□□□□ -1.06
CSTF1-205ENST00000490539 C3orf80F5H4A9 247 aa8.43□□□□□ -1.06
CSTF1-205ENST00000490539 SWT1Q5T5J6 900 aaKnown RBP8.43□□□□□ -1.06
CSTF1-205ENST00000490539 BARGINQ6ZT62 677 aa8.43□□□□□ -1.06
CSTF1-205ENST00000490539 THOC2Q8NI27 1593 aaKnown RBP8.43□□□□□ -1.06
CSTF1-205ENST00000490539 APLP1P51693 650 aa8.42□□□□□ -1.06
CSTF1-205ENST00000490539 NKX2-3Q8TAU0 364 aa8.42□□□□□ -1.06
CSTF1-205ENST00000490539 TMEM134Q9H6X4 195 aa8.42□□□□□ -1.06
CSTF1-205ENST00000490539 BAZ1AQ9NRL2 1556 aaPredicted RBP8.41□□□□□ -1.06
CSTF1-205ENST00000490539 PRR14Q9BWN1 585 aa8.41□□□□□ -1.06
CSTF1-205ENST00000490539 SULF1Q8IWU6 871 aa8.4□□□□□ -1.06
CSTF1-205ENST00000490539 TMUB1Q9BVT8 246 aa8.4□□□□□ -1.06
CSTF1-205ENST00000490539 ILDR2Q71H61 639 aa8.39□□□□□ -1.07
CSTF1-205ENST00000490539 CCDC102AQ96A19 550 aa8.39□□□□□ -1.07
CSTF1-205ENST00000490539 DAXXQ9UER7 740 aaPredicted RBP8.39□□□□□ -1.07
CSTF1-205ENST00000490539 COPS2P61201 443 aa8.38□□□□□ -1.07
CSTF1-205ENST00000490539 SMARCA2P51531 1590 aa8.38□□□□□ -1.07
CSTF1-205ENST00000490539 AK7Q96M32 723 aa8.37□□□□□ -1.07
CSTF1-205ENST00000490539 SMARCA4P51532 1647 aa8.36□□□□□ -1.07
CSTF1-205ENST00000490539 CLCN1P35523 988 aa8.36□□□□□ -1.07
CSTF1-205ENST00000490539 KMT5BQ4FZB7 885 aa8.36□□□□□ -1.07
CSTF1-205ENST00000490539 PKDCCQ504Y2 493 aa8.36□□□□□ -1.07
CSTF1-205ENST00000490539 FBXO41Q8TF61 875 aa8.36□□□□□ -1.07
CSTF1-205ENST00000490539 ARHGEF11O15085 1522 aa8.35□□□□□ -1.07
CSTF1-205ENST00000490539 NCAPD3P42695 1498 aa8.35□□□□□ -1.07
CSTF1-205ENST00000490539 ZPR1O75312 459 aa8.34□□□□□ -1.07
CSTF1-205ENST00000490539 RDH13Q8NBN7 331 aa8.34□□□□□ -1.07
CSTF1-205ENST00000490539 ATAD2BQ9ULI0 1458 aa8.33□□□□□ -1.08
CSTF1-205ENST00000490539 DDX11L8A8MPP1 907 aa8.33□□□□□ -1.08
CSTF1-205ENST00000490539 DGAT1O75907 488 aa8.33□□□□□ -1.08
CSTF1-205ENST00000490539 SLC19A1P41440 591 aa8.33□□□□□ -1.08
CSTF1-205ENST00000490539 MDM2Q00987 491 aaPredicted RBP8.33□□□□□ -1.08
CSTF1-205ENST00000490539 TTLL12Q14166 644 aaPredicted RBP8.33□□□□□ -1.08
CSTF1-205ENST00000490539 CYB5RLQ6IPT4 315 aa8.33□□□□□ -1.08
CSTF1-205ENST00000490539 TRIM67Q6ZTA4 783 aa8.33□□□□□ -1.08
CSTF1-205ENST00000490539 PHOX2BQ99453 314 aa8.33□□□□□ -1.08
CSTF1-205ENST00000490539 GPCPD1Q9NPB8 672 aa8.33□□□□□ -1.08
CSTF1-205ENST00000490539 BAZ1BQ9UIG0 1483 aaKnown RBP8.32□□□□□ -1.08
CSTF1-205ENST00000490539 MYT1Q01538 1121 aa8.32□□□□□ -1.08
CSTF1-205ENST00000490539 NLRP7Q8WX94 980 aa8.31□□□□□ -1.08
CSTF1-205ENST00000490539 HMGXB3Q12766 1538 aa8.3□□□□□ -1.08
CSTF1-205ENST00000490539 RNF223E7ERA6 249 aa8.3□□□□□ -1.08
CSTF1-205ENST00000490539 CFHP08603 1231 aa8.3□□□□□ -1.08
CSTF1-205ENST00000490539 SLC24A3Q9HC58 644 aa8.3□□□□□ -1.08
CSTF1-205ENST00000490539 PCDHB3Q9Y5E6 796 aa8.3□□□□□ -1.08
CSTF1-205ENST00000490539 PRR20EP86478 221 aa8.29□□□□□ -1.08
CSTF1-205ENST00000490539 PRR20CP86479 221 aa8.29□□□□□ -1.08
CSTF1-205ENST00000490539 PRR20DP86480 221 aa8.29□□□□□ -1.08
CSTF1-205ENST00000490539 PRR20BP86481 221 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms