RNA–Protein interactions for RNA: ENST00000490393.1

RIPPLY3-203, Transcript of ripply transcriptional repressor 3, humanhuman

TSL 1 (best)

Gene RIPPLY3, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-203ENST00000490393 SYNMO15061 1565 aa18.77■□□□□ 0.6
RIPPLY3-203ENST00000490393 SCAF11Q99590 1463 aaKnown RBP18.77■□□□□ 0.6
RIPPLY3-203ENST00000490393 ADGRF5Q8IZF2 1346 aa18.77■□□□□ 0.59
RIPPLY3-203ENST00000490393 SCAF1Q9H7N4 1312 aaKnown RBP18.75■□□□□ 0.59
RIPPLY3-203ENST00000490393 ARHGEF40Q8TER5 1519 aa18.74■□□□□ 0.59
RIPPLY3-203ENST00000490393 PPLO60437 1756 aa18.74■□□□□ 0.59
RIPPLY3-203ENST00000490393 SLC24A1O60721 1099 aa18.73■□□□□ 0.59
RIPPLY3-203ENST00000490393 TMF1P82094 1093 aa18.73■□□□□ 0.59
RIPPLY3-203ENST00000490393 PREX1Q8TCU6 1659 aa18.72■□□□□ 0.59
RIPPLY3-203ENST00000490393 IDI1Q13907 227 aa18.72■□□□□ 0.59
RIPPLY3-203ENST00000490393 CHGAP10645 457 aaKnown RBP18.71■□□□□ 0.59
RIPPLY3-203ENST00000490393 CFAP70Q5T0N1 1121 aa18.71■□□□□ 0.59
RIPPLY3-203ENST00000490393 POLR3GLQ9BT43 218 aa18.71■□□□□ 0.59
RIPPLY3-203ENST00000490393 C14orf93Q9H972 538 aaKnown RBP18.71■□□□□ 0.59
RIPPLY3-203ENST00000490393 SETBP1Q9Y6X0 1596 aa18.71■□□□□ 0.58
RIPPLY3-203ENST00000490393 PIK3C2GO75747 1445 aa18.7■□□□□ 0.58
RIPPLY3-203ENST00000490393 EIF3AQ14152 1382 aaKnown RBP18.7■□□□□ 0.58
RIPPLY3-203ENST00000490393 ZFYVE9O95405 1425 aa18.69■□□□□ 0.58
RIPPLY3-203ENST00000490393 DISP3Q9P2K9 1392 aa18.69■□□□□ 0.58
RIPPLY3-203ENST00000490393 VGFO15240 615 aaPredicted RBP18.69■□□□□ 0.58
RIPPLY3-203ENST00000490393 KTN1Q86UP2 1357 aaKnown RBP18.68■□□□□ 0.58
RIPPLY3-203ENST00000490393 CDCA8Q53HL2 280 aa18.67■□□□□ 0.58
RIPPLY3-203ENST00000490393 ERVK-7P63135 1459 aa18.67■□□□□ 0.58
RIPPLY3-203ENST00000490393 NEXMIFQ5QGS0 1516 aa18.66■□□□□ 0.58
RIPPLY3-203ENST00000490393 TMEM131LA2VDJ0 1609 aa18.65■□□□□ 0.58
RIPPLY3-203ENST00000490393 PER1O15534 1290 aaPredicted RBP18.65■□□□□ 0.58
RIPPLY3-203ENST00000490393 GTF3C3Q9Y5Q9 886 aa18.65■□□□□ 0.58
RIPPLY3-203ENST00000490393 CLTCQ00610 1675 aaKnown RBP18.64■□□□□ 0.57
RIPPLY3-203ENST00000490393 FBXO31Q5XUX0 539 aaPredicted RBP18.64■□□□□ 0.57
RIPPLY3-203ENST00000490393 SPATA31D1Q6ZQQ2 1576 aa18.63■□□□□ 0.57
RIPPLY3-203ENST00000490393 RALBP1Q15311 655 aa18.63■□□□□ 0.57
RIPPLY3-203ENST00000490393 SBNO2Q9Y2G9 1366 aa18.62■□□□□ 0.57
RIPPLY3-203ENST00000490393 CCDC184Q52MB2 194 aa18.62■□□□□ 0.57
RIPPLY3-203ENST00000490393 ADGRB1O14514 1584 aa18.62■□□□□ 0.57
RIPPLY3-203ENST00000490393 MYO3AQ8NEV4 1616 aa18.62■□□□□ 0.57
RIPPLY3-203ENST00000490393 MRS2Q9HD23 443 aa18.6■□□□□ 0.57
RIPPLY3-203ENST00000490393 ZMYM3Q14202 1370 aa18.58■□□□□ 0.56
RIPPLY3-203ENST00000490393 MYO5BQ9ULV0 1848 aa18.58■□□□□ 0.56
RIPPLY3-203ENST00000490393 MLECQ14165 292 aa18.57■□□□□ 0.56
RIPPLY3-203ENST00000490393 PANK3Q9H999 370 aa18.57■□□□□ 0.56
RIPPLY3-203ENST00000490393 PARD3Q8TEW0 1356 aa18.55■□□□□ 0.56
RIPPLY3-203ENST00000490393 ESF1Q9H501 851 aaKnown RBP18.55■□□□□ 0.56
RIPPLY3-203ENST00000490393 MYBBP1AQ9BQG0 1328 aaKnown RBP18.54■□□□□ 0.56
RIPPLY3-203ENST00000490393 CENPJQ9HC77 1338 aaPredicted RBP18.54■□□□□ 0.56
RIPPLY3-203ENST00000490393 BRD4O60885 1362 aaPredicted RBP18.53■□□□□ 0.56
RIPPLY3-203ENST00000490393 A2ML1A8K2U0 1454 aa18.52■□□□□ 0.56
RIPPLY3-203ENST00000490393 KDM5AP29375 1690 aaKnown RBP18.52■□□□□ 0.56
RIPPLY3-203ENST00000490393 TMEM132EQ6IEE7 984 aa18.52■□□□□ 0.55
RIPPLY3-203ENST00000490393 PUS7Q96PZ0 661 aaKnown RBP18.52■□□□□ 0.55
RIPPLY3-203ENST00000490393 TRAK1Q9UPV9 953 aa18.52■□□□□ 0.55
RIPPLY3-203ENST00000490393 STAG3Q9UJ98 1225 aa18.51■□□□□ 0.55
RIPPLY3-203ENST00000490393 NUTM2DQ5VT03 806 aaPredicted RBP18.5■□□□□ 0.55
RIPPLY3-203ENST00000490393 HNRNPUQ00839 825 aaKnown RBP eCLIP18.5■□□□□ 0.55
RIPPLY3-203ENST00000490393 FAM9BQ8IZU0 186 aa18.49■□□□□ 0.55
RIPPLY3-203ENST00000490393 PNISRQ8TF01 805 aaKnown RBP18.49■□□□□ 0.55
RIPPLY3-203ENST00000490393 NPC1L1Q9UHC9 1359 aa18.48■□□□□ 0.55
RIPPLY3-203ENST00000490393 MYOM1P52179 1685 aa18.48■□□□□ 0.55
RIPPLY3-203ENST00000490393 TRHP20396 242 aaPredicted RBP18.48■□□□□ 0.55
RIPPLY3-203ENST00000490393 NLRP13Q86W25 1043 aa18.48■□□□□ 0.55
RIPPLY3-203ENST00000490393 TMC1Q8TDI8 760 aa18.48■□□□□ 0.55
RIPPLY3-203ENST00000490393 QRICH2Q9H0J4 1663 aa18.46■□□□□ 0.55
RIPPLY3-203ENST00000490393 KNSTRNQ9Y448 316 aa18.46■□□□□ 0.55
RIPPLY3-203ENST00000490393 ARHGEF28Q8N1W1 1705 aaKnown RBP18.46■□□□□ 0.55
RIPPLY3-203ENST00000490393 TNRQ92752 1358 aa18.45■□□□□ 0.54
RIPPLY3-203ENST00000490393 ASXL1Q8IXJ9 1541 aa18.45■□□□□ 0.54
RIPPLY3-203ENST00000490393 AMER1Q5JTC6 1135 aaPredicted RBP18.45■□□□□ 0.54
RIPPLY3-203ENST00000490393 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.45■□□□□ 0.54
RIPPLY3-203ENST00000490393 RIMS2Q9UQ26 1411 aa18.45■□□□□ 0.54
RIPPLY3-203ENST00000490393 ALKQ9UM73 1620 aa18.44■□□□□ 0.54
RIPPLY3-203ENST00000490393 HDGFP51858 240 aaKnown RBP18.43■□□□□ 0.54
RIPPLY3-203ENST00000490393 CNGB1Q14028 1251 aaPredicted RBP18.43■□□□□ 0.54
RIPPLY3-203ENST00000490393 LRPPRCP42704 1394 aaKnown RBP18.43■□□□□ 0.54
RIPPLY3-203ENST00000490393 ZBED9Q6R2W3 1325 aa18.42■□□□□ 0.54
RIPPLY3-203ENST00000490393 CC2D1BQ5T0F9 858 aaKnown RBP18.41■□□□□ 0.54
RIPPLY3-203ENST00000490393 YTHDC2Q9H6S0 1430 aaKnown RBP18.41■□□□□ 0.54
RIPPLY3-203ENST00000490393 DNAJC5Q9H3Z4 198 aa18.41■□□□□ 0.54
RIPPLY3-203ENST00000490393 EVC2Q86UK5 1308 aa18.4■□□□□ 0.54
RIPPLY3-203ENST00000490393 INSRP06213 1382 aa18.39■□□□□ 0.53
RIPPLY3-203ENST00000490393 PTPRMP28827 1452 aa18.39■□□□□ 0.53
RIPPLY3-203ENST00000490393 NLRP1Q9C000 1473 aa18.38■□□□□ 0.53
RIPPLY3-203ENST00000490393 CARD14Q9BXL6 1004 aa18.37■□□□□ 0.53
RIPPLY3-203ENST00000490393 DLC1Q96QB1 1528 aa18.36■□□□□ 0.53
RIPPLY3-203ENST00000490393 SETD1AO15047 1707 aaKnown RBP18.36■□□□□ 0.53
RIPPLY3-203ENST00000490393 UBR1Q8IWV7 1749 aa18.36■□□□□ 0.53
RIPPLY3-203ENST00000490393 STK26Q9P289 416 aa18.35■□□□□ 0.53
RIPPLY3-203ENST00000490393 TULP4Q9NRJ4 1543 aa18.35■□□□□ 0.53
RIPPLY3-203ENST00000490393 ABCC11Q96J66 1382 aa18.35■□□□□ 0.53
RIPPLY3-203ENST00000490393 TMEM2Q9UHN6 1383 aa18.35■□□□□ 0.53
RIPPLY3-203ENST00000490393 PPP2R1AP30153 589 aa18.33■□□□□ 0.53
RIPPLY3-203ENST00000490393 SIRT1Q96EB6 747 aa18.33■□□□□ 0.53
RIPPLY3-203ENST00000490393 NRXN3Q9Y4C0 1643 aa18.33■□□□□ 0.53
RIPPLY3-203ENST00000490393 NINLQ9Y2I6 1382 aa18.33■□□□□ 0.52
RIPPLY3-203ENST00000490393 SLC12A5Q9H2X9 1139 aa18.33■□□□□ 0.52
RIPPLY3-203ENST00000490393 C3P01024 1663 aa18.32■□□□□ 0.52
RIPPLY3-203ENST00000490393 PRAM1Q96QH2 718 aa18.32■□□□□ 0.52
RIPPLY3-203ENST00000490393 POGKQ9P215 609 aa18.31■□□□□ 0.52
RIPPLY3-203ENST00000490393 FER1L4A9Z1Z3 1794 aa18.31■□□□□ 0.52
RIPPLY3-203ENST00000490393 CEBPAP49715 358 aaPredicted RBP18.29■□□□□ 0.52
RIPPLY3-203ENST00000490393 USP32Q8NFA0 1604 aa18.28■□□□□ 0.52
RIPPLY3-203ENST00000490393 ATAD2Q6PL18 1390 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms