RNA–Protein interactions for RNA: ENST00000490222.1

LRRC1-204, Transcript of leucine rich repeat containing 1, humanhuman

TSL 3

Gene LRRC1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-204ENST00000490222 MAP2K5Q13163 448 aa12.53□□□□□ -0.4
LRRC1-204ENST00000490222 NECTIN2Q92692 538 aa12.52□□□□□ -0.41
LRRC1-204ENST00000490222 MINK1Q8N4C8 1332 aaPredicted RBP12.48□□□□□ -0.41
LRRC1-204ENST00000490222 IRF6O14896 467 aa12.48□□□□□ -0.41
LRRC1-204ENST00000490222 PHOX2BQ99453 314 aa12.48□□□□□ -0.41
LRRC1-204ENST00000490222 ITGBL1O95965 494 aaPredicted RBP12.47□□□□□ -0.41
LRRC1-204ENST00000490222 IFFO2Q5TF58 517 aa12.47□□□□□ -0.41
LRRC1-204ENST00000490222 APLP1P51693 650 aa12.46□□□□□ -0.41
LRRC1-204ENST00000490222 ZC3H15Q8WU90 426 aaKnown RBP12.45□□□□□ -0.42
LRRC1-204ENST00000490222 ZMYND10O75800 440 aa12.44□□□□□ -0.42
LRRC1-204ENST00000490222 NLRP7Q8WX94 980 aa12.44□□□□□ -0.42
LRRC1-204ENST00000490222 BARGINQ6ZT62 677 aa12.43□□□□□ -0.42
LRRC1-204ENST00000490222 BCANQ96GW7 911 aa12.43□□□□□ -0.42
LRRC1-204ENST00000490222 DAXXQ9UER7 740 aaPredicted RBP12.43□□□□□ -0.42
LRRC1-204ENST00000490222 CCDC102AQ96A19 550 aa12.42□□□□□ -0.42
LRRC1-204ENST00000490222 PRR14Q9BWN1 585 aa12.42□□□□□ -0.42
LRRC1-204ENST00000490222 SLC10A3P09131 477 aa12.41□□□□□ -0.42
LRRC1-204ENST00000490222 TJAP1Q5JTD0 557 aa12.4□□□□□ -0.42
LRRC1-204ENST00000490222 KCNC4Q03721 635 aa12.39□□□□□ -0.43
LRRC1-204ENST00000490222 MTRQ99707 1265 aa12.39□□□□□ -0.43
LRRC1-204ENST00000490222 CFHP08603 1231 aa12.38□□□□□ -0.43
LRRC1-204ENST00000490222 RSPH4AQ5TD94 716 aa12.38□□□□□ -0.43
LRRC1-204ENST00000490222 KRI1Q8N9T8 703 aaKnown RBP12.37□□□□□ -0.43
LRRC1-204ENST00000490222 KMT5BQ4FZB7 885 aa12.36□□□□□ -0.43
LRRC1-204ENST00000490222 SULF1Q8IWU6 871 aa12.35□□□□□ -0.43
LRRC1-204ENST00000490222 IL21Q9HBE4 155 aa12.35□□□□□ -0.43
LRRC1-204ENST00000490222 A0A0G2JS52 829 aa12.34□□□□□ -0.43
LRRC1-204ENST00000490222 DDX11L8A8MPP1 907 aa12.34□□□□□ -0.43
LRRC1-204ENST00000490222 ACTN4O43707 911 aaKnown RBP12.34□□□□□ -0.43
LRRC1-204ENST00000490222 MDM2Q00987 491 aaPredicted RBP12.33□□□□□ -0.44
LRRC1-204ENST00000490222 RDH13Q8NBN7 331 aa12.33□□□□□ -0.44
LRRC1-204ENST00000490222 PCDHB3Q9Y5E6 796 aa12.33□□□□□ -0.44
LRRC1-204ENST00000490222 COPS2P61201 443 aa12.31□□□□□ -0.44
LRRC1-204ENST00000490222 ZNF516Q92618 1163 aa12.3□□□□□ -0.44
LRRC1-204ENST00000490222 CLCN1P35523 988 aa12.29□□□□□ -0.44
LRRC1-204ENST00000490222 BLOC1S3Q6QNY0 202 aa12.29□□□□□ -0.44
LRRC1-204ENST00000490222 TMUB1Q9BVT8 246 aa12.28□□□□□ -0.44
LRRC1-204ENST00000490222 GCGRP47871 477 aa12.27□□□□□ -0.45
LRRC1-204ENST00000490222 GPCPD1Q9NPB8 672 aa12.27□□□□□ -0.45
LRRC1-204ENST00000490222 ZPR1O75312 459 aa12.26□□□□□ -0.45
LRRC1-204ENST00000490222 CD46P15529 392 aa12.25□□□□□ -0.45
LRRC1-204ENST00000490222 AMHR2Q16671 573 aa12.25□□□□□ -0.45
LRRC1-204ENST00000490222 AK7Q96M32 723 aa12.24□□□□□ -0.45
LRRC1-204ENST00000490222 FAM217BQ9NTX9 383 aaPredicted RBP12.24□□□□□ -0.45
LRRC1-204ENST00000490222 NR1I2O75469 434 aa12.23□□□□□ -0.45
LRRC1-204ENST00000490222 FUT2Q10981 343 aa12.22□□□□□ -0.45
LRRC1-204ENST00000490222 NKX2-3Q8TAU0 364 aa12.22□□□□□ -0.45
LRRC1-204ENST00000490222 REPIN1Q9BWE0 567 aaKnown RBP12.22□□□□□ -0.45
LRRC1-204ENST00000490222 TRIM66O15016 1216 aa12.21□□□□□ -0.45
LRRC1-204ENST00000490222 RGS20O76081 388 aa12.21□□□□□ -0.45
LRRC1-204ENST00000490222 PUS10Q3MIT2 529 aaKnown RBP12.21□□□□□ -0.45
LRRC1-204ENST00000490222 ATP6V1AP38606 617 aa12.2□□□□□ -0.46
LRRC1-204ENST00000490222 TTLL12Q14166 644 aaPredicted RBP12.2□□□□□ -0.46
LRRC1-204ENST00000490222 MORN1Q5T089 497 aa12.19□□□□□ -0.46
LRRC1-204ENST00000490222 SCUBE3Q8IX30 993 aa12.18□□□□□ -0.46
LRRC1-204ENST00000490222 TLL1O43897 1013 aa12.17□□□□□ -0.46
LRRC1-204ENST00000490222 SLC24A3Q9HC58 644 aa12.17□□□□□ -0.46
LRRC1-204ENST00000490222 KDM4AO75164 1064 aa12.16□□□□□ -0.46
LRRC1-204ENST00000490222 GIGYF2Q6Y7W6 1299 aaKnown RBP12.16□□□□□ -0.46
LRRC1-204ENST00000490222 SSTR3P32745 418 aaPredicted RBP12.15□□□□□ -0.46
LRRC1-204ENST00000490222 PPP1R18Q6NYC8 613 aa12.15□□□□□ -0.46
LRRC1-204ENST00000490222 PARP9Q8IXQ6 854 aa12.15□□□□□ -0.46
LRRC1-204ENST00000490222 ADH1BP00325 375 aa12.14□□□□□ -0.47
LRRC1-204ENST00000490222 GRIPAP1Q4V328 841 aa12.14□□□□□ -0.47
LRRC1-204ENST00000490222 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.14□□□□□ -0.47
LRRC1-204ENST00000490222 USP46P62068 366 aa12.13□□□□□ -0.47
LRRC1-204ENST00000490222 SLC27A5Q9Y2P5 690 aa12.13□□□□□ -0.47
LRRC1-204ENST00000490222 GGCXP38435 758 aa12.12□□□□□ -0.47
LRRC1-204ENST00000490222 PDE4DQ08499 809 aa12.11□□□□□ -0.47
LRRC1-204ENST00000490222 THAP11Q96EK4 314 aa12.1□□□□□ -0.47
LRRC1-204ENST00000490222 SALL2Q9Y467 1007 aaPredicted RBP12.1□□□□□ -0.47
LRRC1-204ENST00000490222 SPSB2Q99619 263 aa12.09□□□□□ -0.47
LRRC1-204ENST00000490222 HOXA2O43364 376 aa12.08□□□□□ -0.48
LRRC1-204ENST00000490222 NUTM1Q86Y26 1132 aa12.08□□□□□ -0.48
LRRC1-204ENST00000490222 FMNL1O95466 1100 aaPredicted RBP12.07□□□□□ -0.48
LRRC1-204ENST00000490222 S1PR4O95977 384 aa12.07□□□□□ -0.48
LRRC1-204ENST00000490222 RNF223E7ERA6 249 aa12.06□□□□□ -0.48
LRRC1-204ENST00000490222 Q3C1V9 767 aa12.06□□□□□ -0.48
LRRC1-204ENST00000490222 BRICD5Q6PL45 260 aa12.06□□□□□ -0.48
LRRC1-204ENST00000490222 SLC6A16Q9GZN6 736 aa12.06□□□□□ -0.48
LRRC1-204ENST00000490222 MS4A1P11836 297 aa12.05□□□□□ -0.48
LRRC1-204ENST00000490222 HLA-CQ95604 372 aa12.05□□□□□ -0.48
LRRC1-204ENST00000490222 BEGAINQ9BUH8 593 aa12.05□□□□□ -0.48
LRRC1-204ENST00000490222 RNF19BQ6ZMZ0 732 aa12.03□□□□□ -0.48
LRRC1-204ENST00000490222 SPIRE2Q8WWL2 714 aa12.03□□□□□ -0.48
LRRC1-204ENST00000490222 FAM160A2Q8N612 972 aaPredicted RBP12.02□□□□□ -0.49
LRRC1-204ENST00000490222 ANKLE1Q8NAG6 615 aa12.02□□□□□ -0.49
LRRC1-204ENST00000490222 GUCA2AQ02747 115 aa12.01□□□□□ -0.49
LRRC1-204ENST00000490222 PRKD2Q9BZL6 878 aa12.01□□□□□ -0.49
LRRC1-204ENST00000490222 MSS51Q4VC12 460 aa12□□□□□ -0.49
LRRC1-204ENST00000490222 V9GY48 417 aaPredicted RBP12□□□□□ -0.49
LRRC1-204ENST00000490222 PPEF1O14829 653 aaPredicted RBP11.99□□□□□ -0.49
LRRC1-204ENST00000490222 MOXD2PA6NHM9 499 aa11.97□□□□□ -0.49
LRRC1-204ENST00000490222 FDX1P10109 184 aa11.97□□□□□ -0.49
LRRC1-204ENST00000490222 DIXDC1Q155Q3 683 aa11.97□□□□□ -0.49
LRRC1-204ENST00000490222 USB1Q9BQ65 265 aaKnown RBP11.97□□□□□ -0.49
LRRC1-204ENST00000490222 TBC1D2Q9BYX2 928 aa11.97□□□□□ -0.49
LRRC1-204ENST00000490222 PRDM9Q9NQV7 894 aa11.96□□□□□ -0.49
LRRC1-204ENST00000490222 PCDHGC3Q9UN70 934 aa11.96□□□□□ -0.49
LRRC1-204ENST00000490222 NDUFV2P19404 249 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms