RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 FAM98CQ17RN3 349 aaKnown RBP11.65□□□□□ -0.54
TM9SF3-206ENST00000490192 ZFRQ96KR1 1074 aaKnown RBP11.65□□□□□ -0.54
TM9SF3-206ENST00000490192 CDHR5Q9HBB8 845 aa11.65□□□□□ -0.54
TM9SF3-206ENST00000490192 NBPF26B4DH59 902 aa11.62□□□□□ -0.55
TM9SF3-206ENST00000490192 RBM27Q9P2N5 1060 aaKnown RBP11.62□□□□□ -0.55
TM9SF3-206ENST00000490192 GNPATO15228 680 aa11.61□□□□□ -0.55
TM9SF3-206ENST00000490192 HDGFP51858 240 aaKnown RBP11.61□□□□□ -0.55
TM9SF3-206ENST00000490192 TATDN2Q93075 761 aa11.6□□□□□ -0.55
TM9SF3-206ENST00000490192 PLA2G2EQ9NZK7 142 aa11.6□□□□□ -0.55
TM9SF3-206ENST00000490192 PNMA3Q9UL41 463 aa11.6□□□□□ -0.55
TM9SF3-206ENST00000490192 SOWAHBA6NEL2 793 aa11.59□□□□□ -0.55
TM9SF3-206ENST00000490192 LRCH3Q96II8 777 aa11.59□□□□□ -0.55
TM9SF3-206ENST00000490192 FECHP22830 423 aa11.58□□□□□ -0.56
TM9SF3-206ENST00000490192 BCAMP50895 628 aa11.58□□□□□ -0.56
TM9SF3-206ENST00000490192 GOPCQ9HD26 462 aa11.58□□□□□ -0.56
TM9SF3-206ENST00000490192 NPDC1Q9NQX5 325 aaPredicted RBP11.58□□□□□ -0.56
TM9SF3-206ENST00000490192 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.58□□□□□ -0.56
TM9SF3-206ENST00000490192 SMAPO00193 183 aa11.57□□□□□ -0.56
TM9SF3-206ENST00000490192 TTLL12Q14166 644 aaPredicted RBP11.57□□□□□ -0.56
TM9SF3-206ENST00000490192 HIC1Q14526 733 aa11.57□□□□□ -0.56
TM9SF3-206ENST00000490192 PADI6Q6TGC4 694 aa11.56□□□□□ -0.56
TM9SF3-206ENST00000490192 NUDT18Q6ZVK8 323 aa11.56□□□□□ -0.56
TM9SF3-206ENST00000490192 FAM198AQ9UFP1 575 aa11.56□□□□□ -0.56
TM9SF3-206ENST00000490192 FCHSD2O94868 740 aa11.55□□□□□ -0.56
TM9SF3-206ENST00000490192 PTGDRQ13258 359 aa11.54□□□□□ -0.56
TM9SF3-206ENST00000490192 CLUAP1Q96AJ1 413 aa11.54□□□□□ -0.56
TM9SF3-206ENST00000490192 NYAP1Q6ZVC0 841 aa11.53□□□□□ -0.56
TM9SF3-206ENST00000490192 A6NJR5 290 aa11.52□□□□□ -0.57
TM9SF3-206ENST00000490192 NPM2Q86SE8 214 aaKnown RBP11.52□□□□□ -0.57
TM9SF3-206ENST00000490192 PCMTD1Q96MG8 357 aaPredicted RBP11.52□□□□□ -0.57
TM9SF3-206ENST00000490192 TSR3Q9UJK0 312 aaKnown RBP11.52□□□□□ -0.57
TM9SF3-206ENST00000490192 HPS5Q9UPZ3 1129 aa11.52□□□□□ -0.57
TM9SF3-206ENST00000490192 TRAK2O60296 914 aa11.51□□□□□ -0.57
TM9SF3-206ENST00000490192 PDIA4P13667 645 aaKnown RBP11.51□□□□□ -0.57
TM9SF3-206ENST00000490192 SLC4A3P48751 1232 aa11.51□□□□□ -0.57
TM9SF3-206ENST00000490192 PPP4CP60510 307 aa11.51□□□□□ -0.57
TM9SF3-206ENST00000490192 GIGYF2Q6Y7W6 1299 aaKnown RBP11.51□□□□□ -0.57
TM9SF3-206ENST00000490192 SAMD7Q7Z3H4 446 aa11.51□□□□□ -0.57
TM9SF3-206ENST00000490192 CCDC82Q8N4S0 544 aa11.51□□□□□ -0.57
TM9SF3-206ENST00000490192 MS4A1P11836 297 aa11.5□□□□□ -0.57
TM9SF3-206ENST00000490192 TTC13Q8NBP0 860 aa11.5□□□□□ -0.57
TM9SF3-206ENST00000490192 WBP1LQ9NX94 342 aa11.5□□□□□ -0.57
TM9SF3-206ENST00000490192 RNF40O75150 1001 aa11.48□□□□□ -0.57
TM9SF3-206ENST00000490192 C3orf80F5H4A9 247 aa11.47□□□□□ -0.57
TM9SF3-206ENST00000490192 RBM46Q8TBY0 533 aaKnown RBP11.47□□□□□ -0.57
TM9SF3-206ENST00000490192 ZBTB7CA1YPR0 619 aa11.45□□□□□ -0.58
TM9SF3-206ENST00000490192 NECTIN2Q92692 538 aa11.45□□□□□ -0.58
TM9SF3-206ENST00000490192 REPIN1Q9BWE0 567 aaKnown RBP11.45□□□□□ -0.58
TM9SF3-206ENST00000490192 MCM6Q14566 821 aa11.44□□□□□ -0.58
TM9SF3-206ENST00000490192 SH3D19Q5HYK7 790 aa11.43□□□□□ -0.58
TM9SF3-206ENST00000490192 EYA1Q99502 592 aa11.43□□□□□ -0.58
TM9SF3-206ENST00000490192 SLF2Q8IX21 1173 aa11.42□□□□□ -0.58
TM9SF3-206ENST00000490192 SWT1Q5T5J6 900 aaKnown RBP11.41□□□□□ -0.58
TM9SF3-206ENST00000490192 OATP04181 439 aa11.4□□□□□ -0.58
TM9SF3-206ENST00000490192 DNAJB2P25686 324 aa11.4□□□□□ -0.58
TM9SF3-206ENST00000490192 ADGRG1Q9Y653 693 aa11.4□□□□□ -0.58
TM9SF3-206ENST00000490192 IFFO2Q5TF58 517 aa11.39□□□□□ -0.59
TM9SF3-206ENST00000490192 KCNC4Q03721 635 aa11.38□□□□□ -0.59
TM9SF3-206ENST00000490192 PROSER2Q86WR7 435 aaPredicted RBP11.38□□□□□ -0.59
TM9SF3-206ENST00000490192 ZNF777Q9ULD5 760 aaPredicted RBP11.38□□□□□ -0.59
TM9SF3-206ENST00000490192 FAM161AQ3B820 660 aa11.37□□□□□ -0.59
TM9SF3-206ENST00000490192 CCDC9Q9Y3X0 531 aaKnown RBP11.37□□□□□ -0.59
TM9SF3-206ENST00000490192 CLCN1P35523 988 aa11.36□□□□□ -0.59
TM9SF3-206ENST00000490192 TMUB1Q9BVT8 246 aa11.36□□□□□ -0.59
TM9SF3-206ENST00000490192 RCCD1A6NED2 376 aa11.35□□□□□ -0.59
TM9SF3-206ENST00000490192 ITGBL1O95965 494 aaPredicted RBP11.35□□□□□ -0.59
TM9SF3-206ENST00000490192 SKIV2LQ15477 1246 aaKnown RBP11.35□□□□□ -0.59
TM9SF3-206ENST00000490192 MDM2Q00987 491 aaPredicted RBP11.34□□□□□ -0.59
TM9SF3-206ENST00000490192 GPCPD1Q9NPB8 672 aa11.34□□□□□ -0.59
TM9SF3-206ENST00000490192 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.33□□□□□ -0.6
TM9SF3-206ENST00000490192 POM121Q96HA1 1249 aa11.33□□□□□ -0.6
TM9SF3-206ENST00000490192 PRR14Q9BWN1 585 aa11.33□□□□□ -0.6
TM9SF3-206ENST00000490192 TMEM134Q9H6X4 195 aa11.33□□□□□ -0.6
TM9SF3-206ENST00000490192 ATP1B4Q9UN42 357 aaPredicted RBP11.33□□□□□ -0.6
TM9SF3-206ENST00000490192 RAD21O60216 631 aa11.32□□□□□ -0.6
TM9SF3-206ENST00000490192 SSTR3P32745 418 aaPredicted RBP11.32□□□□□ -0.6
TM9SF3-206ENST00000490192 FNBP4Q8N3X1 1017 aaPredicted RBP11.32□□□□□ -0.6
TM9SF3-206ENST00000490192 RSPH4AQ5TD94 716 aa11.31□□□□□ -0.6
TM9SF3-206ENST00000490192 PROCA1Q8NCQ7 364 aaPredicted RBP11.31□□□□□ -0.6
TM9SF3-206ENST00000490192 PXYLP1Q8TE99 480 aa11.31□□□□□ -0.6
TM9SF3-206ENST00000490192 CCDC97Q96F63 343 aaPredicted RBP11.3□□□□□ -0.6
TM9SF3-206ENST00000490192 PHOX2BQ99453 314 aa11.3□□□□□ -0.6
TM9SF3-206ENST00000490192 METTL3Q86U44 580 aaKnown RBP11.29□□□□□ -0.6
TM9SF3-206ENST00000490192 BEGAINQ9BUH8 593 aa11.29□□□□□ -0.6
TM9SF3-206ENST00000490192 SERPINA10Q9UK55 444 aa11.29□□□□□ -0.6
TM9SF3-206ENST00000490192 A0A0G2JS52 829 aa11.28□□□□□ -0.6
TM9SF3-206ENST00000490192 APLP1P51693 650 aa11.28□□□□□ -0.6
TM9SF3-206ENST00000490192 IL21Q9HBE4 155 aa11.28□□□□□ -0.6
TM9SF3-206ENST00000490192 POLR3EQ9NVU0 708 aa11.28□□□□□ -0.6
TM9SF3-206ENST00000490192 MTRQ99707 1265 aa11.27□□□□□ -0.61
TM9SF3-206ENST00000490192 KMT5BQ4FZB7 885 aa11.26□□□□□ -0.61
TM9SF3-206ENST00000490192 TJAP1Q5JTD0 557 aa11.26□□□□□ -0.61
TM9SF3-206ENST00000490192 TRAIPQ9BWF2 469 aa11.26□□□□□ -0.61
TM9SF3-206ENST00000490192 RGS20O76081 388 aa11.25□□□□□ -0.61
TM9SF3-206ENST00000490192 SPDYE5A6NIY4 337 aa11.23□□□□□ -0.61
TM9SF3-206ENST00000490192 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.23□□□□□ -0.61
TM9SF3-206ENST00000490192 FAM217BQ9NTX9 383 aaPredicted RBP11.23□□□□□ -0.61
TM9SF3-206ENST00000490192 COG6Q9Y2V7 657 aa11.23□□□□□ -0.61
TM9SF3-206ENST00000490192 PCDHB3Q9Y5E6 796 aa11.23□□□□□ -0.61
TM9SF3-206ENST00000490192 COPS2P61201 443 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms