RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 POLR1AO95602 1720 aaPredicted RBP15.82■□□□□ 0.12
TFF3-203ENST00000489676 CHGAP10645 457 aaKnown RBP15.81■□□□□ 0.12
TFF3-203ENST00000489676 TONSLQ96HA7 1378 aa15.81■□□□□ 0.12
TFF3-203ENST00000489676 RPGRIP1LQ68CZ1 1315 aa15.8■□□□□ 0.12
TFF3-203ENST00000489676 RGL3Q3MIN7 710 aa15.8■□□□□ 0.12
TFF3-203ENST00000489676 SCAF11Q99590 1463 aaKnown RBP15.79■□□□□ 0.12
TFF3-203ENST00000489676 THEMISQ8N1K5 641 aaPredicted RBP15.79■□□□□ 0.12
TFF3-203ENST00000489676 L3MBTL2Q969R5 705 aa15.79■□□□□ 0.12
TFF3-203ENST00000489676 STAG3Q9UJ98 1225 aa15.79■□□□□ 0.12
TFF3-203ENST00000489676 TIMELESSQ9UNS1 1208 aa15.79■□□□□ 0.12
TFF3-203ENST00000489676 NRXN3Q9Y4C0 1643 aa15.79■□□□□ 0.12
TFF3-203ENST00000489676 SETBP1Q9Y6X0 1596 aa15.78■□□□□ 0.12
TFF3-203ENST00000489676 PIK3C2GO75747 1445 aa15.77■□□□□ 0.12
TFF3-203ENST00000489676 ZNF326Q5BKZ1 582 aaKnown RBP15.77■□□□□ 0.12
TFF3-203ENST00000489676 STRCQ7RTU9 1775 aa15.77■□□□□ 0.11
TFF3-203ENST00000489676 MED14O60244 1454 aa15.77■□□□□ 0.11
TFF3-203ENST00000489676 SETD1AO15047 1707 aaKnown RBP15.77■□□□□ 0.11
TFF3-203ENST00000489676 PRAG1Q86YV5 1406 aa15.77■□□□□ 0.11
TFF3-203ENST00000489676 IQGAP1P46940 1657 aa15.76■□□□□ 0.11
TFF3-203ENST00000489676 LTKP29376 864 aa15.75■□□□□ 0.11
TFF3-203ENST00000489676 LAMC1P11047 1609 aa15.75■□□□□ 0.11
TFF3-203ENST00000489676 PLEKHG1Q9ULL1 1385 aa15.75■□□□□ 0.11
TFF3-203ENST00000489676 ADGRF5Q8IZF2 1346 aa15.74■□□□□ 0.11
TFF3-203ENST00000489676 HSPA2P54652 639 aa15.74■□□□□ 0.11
TFF3-203ENST00000489676 DCAF11Q8TEB1 546 aa15.74■□□□□ 0.11
TFF3-203ENST00000489676 STAC3Q96MF2 364 aa15.74■□□□□ 0.11
TFF3-203ENST00000489676 TRPM1Q7Z4N2 1603 aa15.74■□□□□ 0.11
TFF3-203ENST00000489676 KIAA1210Q9ULL0 1709 aa15.74■□□□□ 0.11
TFF3-203ENST00000489676 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.73■□□□□ 0.11
TFF3-203ENST00000489676 DIP2AQ14689 1571 aa15.72■□□□□ 0.11
TFF3-203ENST00000489676 ASXL1Q8IXJ9 1541 aa15.72■□□□□ 0.11
TFF3-203ENST00000489676 ADAMTS13Q76LX8 1427 aa15.71■□□□□ 0.11
TFF3-203ENST00000489676 VGFO15240 615 aaPredicted RBP15.71■□□□□ 0.11
TFF3-203ENST00000489676 NUTM2DQ5VT03 806 aaPredicted RBP15.71■□□□□ 0.11
TFF3-203ENST00000489676 ALKQ9UM73 1620 aa15.7■□□□□ 0.1
TFF3-203ENST00000489676 TXNDC2Q86VQ3 553 aa15.7■□□□□ 0.1
TFF3-203ENST00000489676 RALGAPBQ86X10 1494 aa15.7■□□□□ 0.1
TFF3-203ENST00000489676 NPHP4O75161 1426 aaPredicted RBP15.69■□□□□ 0.1
TFF3-203ENST00000489676 PPP1R15AO75807 674 aaPredicted RBP15.69■□□□□ 0.1
TFF3-203ENST00000489676 NBPF8Q3BBV2 869 aa15.69■□□□□ 0.1
TFF3-203ENST00000489676 ANKLE2Q86XL3 938 aa15.69■□□□□ 0.1
TFF3-203ENST00000489676 EID1Q9Y6B2 187 aa15.69■□□□□ 0.1
TFF3-203ENST00000489676 ADGRB1O14514 1584 aa15.69■□□□□ 0.1
TFF3-203ENST00000489676 HDGFP51858 240 aaKnown RBP15.68■□□□□ 0.1
TFF3-203ENST00000489676 KDM2AQ9Y2K7 1162 aa15.68■□□□□ 0.1
TFF3-203ENST00000489676 NCKAP5LQ9HCH0 1330 aa15.67■□□□□ 0.1
TFF3-203ENST00000489676 CERKQ8TCT0 537 aa15.66■□□□□ 0.1
TFF3-203ENST00000489676 GPRASP1Q5JY77 1395 aa15.65■□□□□ 0.1
TFF3-203ENST00000489676 DISP3Q9P2K9 1392 aa15.64■□□□□ 0.09
TFF3-203ENST00000489676 SOCS7O14512 581 aa15.64■□□□□ 0.09
TFF3-203ENST00000489676 C14orf93Q9H972 538 aaKnown RBP15.64■□□□□ 0.09
TFF3-203ENST00000489676 XRN1Q8IZH2 1706 aaKnown RBP15.63■□□□□ 0.09
TFF3-203ENST00000489676 KNDC1Q76NI1 1749 aa15.63■□□□□ 0.09
TFF3-203ENST00000489676 NWD1Q149M9 1564 aa15.62■□□□□ 0.09
TFF3-203ENST00000489676 ZEB1P37275 1124 aaPredicted RBP15.62■□□□□ 0.09
TFF3-203ENST00000489676 CFAP70Q5T0N1 1121 aa15.62■□□□□ 0.09
TFF3-203ENST00000489676 METP08581 1390 aa15.62■□□□□ 0.09
TFF3-203ENST00000489676 ILDR2Q71H61 639 aa15.61■□□□□ 0.09
TFF3-203ENST00000489676 CHD2O14647 1828 aaKnown RBP15.6■□□□□ 0.09
TFF3-203ENST00000489676 TBX22Q9Y458 520 aa15.6■□□□□ 0.09
TFF3-203ENST00000489676 PIK3R4Q99570 1358 aa15.6■□□□□ 0.09
TFF3-203ENST00000489676 PTPRUQ92729 1446 aa15.6■□□□□ 0.09
TFF3-203ENST00000489676 CPS1P31327 1500 aa15.59■□□□□ 0.09
TFF3-203ENST00000489676 SENP3Q9H4L4 574 aaPredicted RBP15.59■□□□□ 0.09
TFF3-203ENST00000489676 TECPR2O15040 1411 aa15.59■□□□□ 0.09
TFF3-203ENST00000489676 ARHGEF28Q8N1W1 1705 aaKnown RBP15.58■□□□□ 0.08
TFF3-203ENST00000489676 STRCP1A6NGW2 1772 aa15.58■□□□□ 0.08
TFF3-203ENST00000489676 NBPF1Q3BBV0 1214 aa15.58■□□□□ 0.08
TFF3-203ENST00000489676 SLC26A8Q96RN1 970 aa15.58■□□□□ 0.08
TFF3-203ENST00000489676 ROCK2O75116 1388 aaKnown RBP15.58■□□□□ 0.08
TFF3-203ENST00000489676 YTHDC2Q9H6S0 1430 aaKnown RBP15.58■□□□□ 0.08
TFF3-203ENST00000489676 LRPPRCP42704 1394 aaKnown RBP15.57■□□□□ 0.08
TFF3-203ENST00000489676 DLC1Q96QB1 1528 aa15.57■□□□□ 0.08
TFF3-203ENST00000489676 PTCH1Q13635 1447 aa15.55■□□□□ 0.08
TFF3-203ENST00000489676 NKTRP30414 1462 aaKnown RBP15.54■□□□□ 0.08
TFF3-203ENST00000489676 TMEM132EQ6IEE7 984 aa15.54■□□□□ 0.08
TFF3-203ENST00000489676 BCANQ96GW7 911 aa15.54■□□□□ 0.08
TFF3-203ENST00000489676 ABCC11Q96J66 1382 aa15.53■□□□□ 0.08
TFF3-203ENST00000489676 DMRT2Q9Y5R5 561 aa15.52■□□□□ 0.08
TFF3-203ENST00000489676 CARD11Q9BXL7 1154 aa15.51■□□□□ 0.07
TFF3-203ENST00000489676 USP47Q96K76 1375 aa15.5■□□□□ 0.07
TFF3-203ENST00000489676 ROBO2Q9HCK4 1378 aa15.5■□□□□ 0.07
TFF3-203ENST00000489676 FAM135BQ49AJ0 1406 aa15.5■□□□□ 0.07
TFF3-203ENST00000489676 LTBP4Q8N2S1 1624 aa15.49■□□□□ 0.07
TFF3-203ENST00000489676 QRICH2Q9H0J4 1663 aa15.48■□□□□ 0.07
TFF3-203ENST00000489676 KCNA6P17658 529 aa15.48■□□□□ 0.07
TFF3-203ENST00000489676 AMOTL2Q9Y2J4 779 aa15.48■□□□□ 0.07
TFF3-203ENST00000489676 ZNF335Q9H4Z2 1342 aaPredicted RBP15.47■□□□□ 0.07
TFF3-203ENST00000489676 ADGRB2O60241 1585 aa15.47■□□□□ 0.07
TFF3-203ENST00000489676 XIRP1Q702N8 1843 aaKnown RBP15.47■□□□□ 0.07
TFF3-203ENST00000489676 NALCNQ8IZF0 1738 aa15.46■□□□□ 0.07
TFF3-203ENST00000489676 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.46■□□□□ 0.07
TFF3-203ENST00000489676 SIRT1Q96EB6 747 aa15.46■□□□□ 0.07
TFF3-203ENST00000489676 STK26Q9P289 416 aa15.46■□□□□ 0.07
TFF3-203ENST00000489676 EIF3AQ14152 1382 aaKnown RBP15.46■□□□□ 0.07
TFF3-203ENST00000489676 PLEKHH1Q9ULM0 1364 aa15.46■□□□□ 0.07
TFF3-203ENST00000489676 TRAK1Q9UPV9 953 aa15.45■□□□□ 0.06
TFF3-203ENST00000489676 SBNO2Q9Y2G9 1366 aa15.45■□□□□ 0.06
TFF3-203ENST00000489676 LRRC7Q96NW7 1537 aa15.44■□□□□ 0.06
TFF3-203ENST00000489676 PRAM1Q96QH2 718 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms