RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 CCDC144AA2RUR9 1427 aa13.73□□□□□ -0.21
NOD1-208ENST00000489614 KIF3BO15066 747 aa13.72□□□□□ -0.21
NOD1-208ENST00000489614 SETD1AO15047 1707 aaKnown RBP13.72□□□□□ -0.21
NOD1-208ENST00000489614 ADAMTSL3P82987 1691 aa13.72□□□□□ -0.21
NOD1-208ENST00000489614 NEXMIFQ5QGS0 1516 aa13.71□□□□□ -0.21
NOD1-208ENST00000489614 PRAG1Q86YV5 1406 aa13.71□□□□□ -0.21
NOD1-208ENST00000489614 ERVK-7P63135 1459 aa13.71□□□□□ -0.21
NOD1-208ENST00000489614 PPP6R1Q9UPN7 881 aa13.71□□□□□ -0.22
NOD1-208ENST00000489614 L3MBTL2Q969R5 705 aa13.7□□□□□ -0.22
NOD1-208ENST00000489614 IL27Q8NEV9 243 aa13.7□□□□□ -0.22
NOD1-208ENST00000489614 MYO3AQ8NEV4 1616 aa13.7□□□□□ -0.22
NOD1-208ENST00000489614 PKNOX2Q96KN3 472 aa13.7□□□□□ -0.22
NOD1-208ENST00000489614 NBR1Q14596 966 aa13.69□□□□□ -0.22
NOD1-208ENST00000489614 UBR1Q8IWV7 1749 aa13.68□□□□□ -0.22
NOD1-208ENST00000489614 GPRASP1Q5JY77 1395 aa13.68□□□□□ -0.22
NOD1-208ENST00000489614 SETBP1Q9Y6X0 1596 aa13.67□□□□□ -0.22
NOD1-208ENST00000489614 NBPF8Q3BBV2 869 aa13.67□□□□□ -0.22
NOD1-208ENST00000489614 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.65□□□□□ -0.23
NOD1-208ENST00000489614 ZNF142P52746 1687 aaPredicted RBP13.64□□□□□ -0.23
NOD1-208ENST00000489614 ERICH6BQ5W0A0 696 aa13.64□□□□□ -0.23
NOD1-208ENST00000489614 MYT1LQ9UL68 1186 aa13.64□□□□□ -0.23
NOD1-208ENST00000489614 NRXN3Q9Y4C0 1643 aa13.63□□□□□ -0.23
NOD1-208ENST00000489614 ZFYVE9O95405 1425 aa13.62□□□□□ -0.23
NOD1-208ENST00000489614 ADGRB1O14514 1584 aa13.61□□□□□ -0.23
NOD1-208ENST00000489614 ARHGEF28Q8N1W1 1705 aaKnown RBP13.59□□□□□ -0.23
NOD1-208ENST00000489614 PIK3C2GO75747 1445 aa13.59□□□□□ -0.23
NOD1-208ENST00000489614 RIMS1Q86UR5 1692 aaKnown RBP13.59□□□□□ -0.23
NOD1-208ENST00000489614 STAC3Q96MF2 364 aa13.58□□□□□ -0.24
NOD1-208ENST00000489614 ASXL1Q8IXJ9 1541 aa13.58□□□□□ -0.24
NOD1-208ENST00000489614 PODXL2Q9NZ53 605 aa13.58□□□□□ -0.24
NOD1-208ENST00000489614 WASHC2CQ9Y4E1 1318 aa13.57□□□□□ -0.24
NOD1-208ENST00000489614 KNDC1Q76NI1 1749 aa13.57□□□□□ -0.24
NOD1-208ENST00000489614 A2ML1A8K2U0 1454 aa13.56□□□□□ -0.24
NOD1-208ENST00000489614 GGT6Q6P531 493 aa13.56□□□□□ -0.24
NOD1-208ENST00000489614 NEFLP07196 543 aa13.55□□□□□ -0.24
NOD1-208ENST00000489614 MYOM1P52179 1685 aa13.55□□□□□ -0.24
NOD1-208ENST00000489614 FANCIQ9NVI1 1328 aa13.54□□□□□ -0.24
NOD1-208ENST00000489614 TRHP20396 242 aaPredicted RBP13.53□□□□□ -0.24
NOD1-208ENST00000489614 ZMYM3Q14202 1370 aa13.53□□□□□ -0.24
NOD1-208ENST00000489614 QRICH2Q9H0J4 1663 aa13.52□□□□□ -0.25
NOD1-208ENST00000489614 RPGRIP1LQ68CZ1 1315 aa13.52□□□□□ -0.25
NOD1-208ENST00000489614 SLIT1O75093 1534 aa13.52□□□□□ -0.25
NOD1-208ENST00000489614 NLRP1Q9C000 1473 aa13.52□□□□□ -0.25
NOD1-208ENST00000489614 ARHGAP23Q9P227 1491 aa13.5□□□□□ -0.25
NOD1-208ENST00000489614 SLC52A1Q9NWF4 448 aa13.5□□□□□ -0.25
NOD1-208ENST00000489614 ALKQ9UM73 1620 aa13.49□□□□□ -0.25
NOD1-208ENST00000489614 DCAF11Q8TEB1 546 aa13.49□□□□□ -0.25
NOD1-208ENST00000489614 USP47Q96K76 1375 aa13.49□□□□□ -0.25
NOD1-208ENST00000489614 PTPRMP28827 1452 aa13.48□□□□□ -0.25
NOD1-208ENST00000489614 HSPA5P11021 654 aaKnown RBP13.48□□□□□ -0.25
NOD1-208ENST00000489614 SCAF11Q99590 1463 aaKnown RBP13.47□□□□□ -0.25
NOD1-208ENST00000489614 IDI1Q13907 227 aa13.46□□□□□ -0.25
NOD1-208ENST00000489614 CEP170BQ9Y4F5 1589 aaPredicted RBP13.46□□□□□ -0.25
NOD1-208ENST00000489614 DAXXQ9UER7 740 aaPredicted RBP13.46□□□□□ -0.25
NOD1-208ENST00000489614 FBXO31Q5XUX0 539 aaPredicted RBP13.45□□□□□ -0.26
NOD1-208ENST00000489614 DLC1Q96QB1 1528 aa13.45□□□□□ -0.26
NOD1-208ENST00000489614 ADGRF5Q8IZF2 1346 aa13.45□□□□□ -0.26
NOD1-208ENST00000489614 MED14O60244 1454 aa13.44□□□□□ -0.26
NOD1-208ENST00000489614 TNRQ92752 1358 aa13.44□□□□□ -0.26
NOD1-208ENST00000489614 ROCK2O75116 1388 aaKnown RBP13.44□□□□□ -0.26
NOD1-208ENST00000489614 EIF4G2P78344 907 aaKnown RBP eCLIP13.43□□□□□ -0.26
NOD1-208ENST00000489614 WASHC2AQ641Q2 1341 aa13.43□□□□□ -0.26
NOD1-208ENST00000489614 CCDC7Q96M83 1385 aa13.43□□□□□ -0.26
NOD1-208ENST00000489614 ARID4BQ4LE39 1312 aaPredicted RBP13.43□□□□□ -0.26
NOD1-208ENST00000489614 DIP2AQ14689 1571 aa13.43□□□□□ -0.26
NOD1-208ENST00000489614 C11orf95C9JLR9 678 aaPredicted RBP13.43□□□□□ -0.26
NOD1-208ENST00000489614 CPS1P31327 1500 aa13.42□□□□□ -0.26
NOD1-208ENST00000489614 SBNO2Q9Y2G9 1366 aa13.42□□□□□ -0.26
NOD1-208ENST00000489614 NBPF1Q3BBV0 1214 aa13.42□□□□□ -0.26
NOD1-208ENST00000489614 RTL5Q5HYW3 569 aaPredicted RBP13.41□□□□□ -0.26
NOD1-208ENST00000489614 SETD1BQ9UPS6 1966 aaKnown RBP13.41□□□□□ -0.26
NOD1-208ENST00000489614 XRN1Q8IZH2 1706 aaKnown RBP13.41□□□□□ -0.26
NOD1-208ENST00000489614 PAK3O75914 559 aaPredicted RBP13.4□□□□□ -0.26
NOD1-208ENST00000489614 RGL3Q3MIN7 710 aa13.4□□□□□ -0.26
NOD1-208ENST00000489614 TESK2Q96S53 571 aa13.4□□□□□ -0.26
NOD1-208ENST00000489614 C14orf93Q9H972 538 aaKnown RBP13.4□□□□□ -0.26
NOD1-208ENST00000489614 RIMS2Q9UQ26 1411 aa13.4□□□□□ -0.26
NOD1-208ENST00000489614 IRX6P78412 446 aaPredicted RBP13.38□□□□□ -0.27
NOD1-208ENST00000489614 KDM2AQ9Y2K7 1162 aa13.38□□□□□ -0.27
NOD1-208ENST00000489614 ADGRB2O60241 1585 aa13.38□□□□□ -0.27
NOD1-208ENST00000489614 USP32Q8NFA0 1604 aa13.37□□□□□ -0.27
NOD1-208ENST00000489614 KIF7Q2M1P5 1343 aa13.37□□□□□ -0.27
NOD1-208ENST00000489614 CHD2O14647 1828 aaKnown RBP13.37□□□□□ -0.27
NOD1-208ENST00000489614 NOP58Q9Y2X3 529 aaKnown RBP13.37□□□□□ -0.27
NOD1-208ENST00000489614 TECPR2O15040 1411 aa13.37□□□□□ -0.27
NOD1-208ENST00000489614 TULP4Q9NRJ4 1543 aa13.36□□□□□ -0.27
NOD1-208ENST00000489614 TMEM2Q9UHN6 1383 aa13.36□□□□□ -0.27
NOD1-208ENST00000489614 CARD11Q9BXL7 1154 aa13.36□□□□□ -0.27
NOD1-208ENST00000489614 ADAMTS13Q76LX8 1427 aa13.35□□□□□ -0.27
NOD1-208ENST00000489614 TOPAZ1Q8N9V7 1692 aa13.35□□□□□ -0.27
NOD1-208ENST00000489614 DISP3Q9P2K9 1392 aa13.34□□□□□ -0.27
NOD1-208ENST00000489614 MLECQ14165 292 aa13.33□□□□□ -0.27
NOD1-208ENST00000489614 HIRIP3Q9BW71 556 aaPredicted RBP13.33□□□□□ -0.27
NOD1-208ENST00000489614 PLEKHG1Q9ULL1 1385 aa13.33□□□□□ -0.28
NOD1-208ENST00000489614 CFAP70Q5T0N1 1121 aa13.32□□□□□ -0.28
NOD1-208ENST00000489614 VGFO15240 615 aaPredicted RBP13.32□□□□□ -0.28
NOD1-208ENST00000489614 VSIG10Q8N0Z9 540 aa13.32□□□□□ -0.28
NOD1-208ENST00000489614 ZMYND15Q9H091 742 aa13.32□□□□□ -0.28
NOD1-208ENST00000489614 ST20-MTHFSA0A0A6YYL1 179 aa13.31□□□□□ -0.28
NOD1-208ENST00000489614 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms