RNA–Protein interactions for RNA: ENST00000489556.5

CNIH3-209, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

TSL 5

Gene CNIH3, Length 866 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-209ENST00000489556 HSPA2P54652 639 aa12.4□□□□□ -0.42
CNIH3-209ENST00000489556 NUTM2DQ5VT03 806 aaPredicted RBP12.4□□□□□ -0.42
CNIH3-209ENST00000489556 MYO5BQ9ULV0 1848 aa12.39□□□□□ -0.43
CNIH3-209ENST00000489556 ADGRB3O60242 1522 aa12.39□□□□□ -0.43
CNIH3-209ENST00000489556 TXNDC2Q86VQ3 553 aa12.39□□□□□ -0.43
CNIH3-209ENST00000489556 UBR1Q8IWV7 1749 aa12.39□□□□□ -0.43
CNIH3-209ENST00000489556 ANKLE2Q86XL3 938 aa12.38□□□□□ -0.43
CNIH3-209ENST00000489556 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.38□□□□□ -0.43
CNIH3-209ENST00000489556 DCAF11Q8TEB1 546 aa12.38□□□□□ -0.43
CNIH3-209ENST00000489556 TMEM131LA2VDJ0 1609 aa12.37□□□□□ -0.43
CNIH3-209ENST00000489556 ZNF142P52746 1687 aaPredicted RBP12.37□□□□□ -0.43
CNIH3-209ENST00000489556 RPGRIP1LQ68CZ1 1315 aa12.37□□□□□ -0.43
CNIH3-209ENST00000489556 VGFO15240 615 aaPredicted RBP12.36□□□□□ -0.43
CNIH3-209ENST00000489556 RIMS2Q9UQ26 1411 aa12.36□□□□□ -0.43
CNIH3-209ENST00000489556 KDM5AP29375 1690 aaKnown RBP12.35□□□□□ -0.43
CNIH3-209ENST00000489556 TMEM2Q9UHN6 1383 aa12.35□□□□□ -0.43
CNIH3-209ENST00000489556 L3MBTL2Q969R5 705 aa12.35□□□□□ -0.43
CNIH3-209ENST00000489556 NCKAP5LQ9HCH0 1330 aa12.35□□□□□ -0.43
CNIH3-209ENST00000489556 LMTK3Q96Q04 1460 aa12.34□□□□□ -0.43
CNIH3-209ENST00000489556 SPATA31E1Q6ZUB1 1445 aa12.33□□□□□ -0.44
CNIH3-209ENST00000489556 DCAF8L1A6NGE4 600 aa12.32□□□□□ -0.44
CNIH3-209ENST00000489556 LTKP29376 864 aa12.31□□□□□ -0.44
CNIH3-209ENST00000489556 STAC3Q96MF2 364 aa12.31□□□□□ -0.44
CNIH3-209ENST00000489556 TIMELESSQ9UNS1 1208 aa12.31□□□□□ -0.44
CNIH3-209ENST00000489556 PPP4R3CPQ6ZMV5 832 aa12.3□□□□□ -0.44
CNIH3-209ENST00000489556 PPLO60437 1756 aa12.3□□□□□ -0.44
CNIH3-209ENST00000489556 NEURL4Q96JN8 1562 aa12.3□□□□□ -0.44
CNIH3-209ENST00000489556 SCAF11Q99590 1463 aaKnown RBP12.29□□□□□ -0.44
CNIH3-209ENST00000489556 POLR1AO95602 1720 aaPredicted RBP12.29□□□□□ -0.44
CNIH3-209ENST00000489556 SLIT1O75093 1534 aa12.29□□□□□ -0.44
CNIH3-209ENST00000489556 NEXMIFQ5QGS0 1516 aa12.29□□□□□ -0.44
CNIH3-209ENST00000489556 HOXD11P31277 338 aaPredicted RBP12.29□□□□□ -0.44
CNIH3-209ENST00000489556 ADGRF5Q8IZF2 1346 aa12.29□□□□□ -0.44
CNIH3-209ENST00000489556 ARHGAP23Q9P227 1491 aa12.28□□□□□ -0.44
CNIH3-209ENST00000489556 SLC26A8Q96RN1 970 aa12.28□□□□□ -0.44
CNIH3-209ENST00000489556 ZEB1P37275 1124 aaPredicted RBP12.27□□□□□ -0.45
CNIH3-209ENST00000489556 NPHP4O75161 1426 aaPredicted RBP12.27□□□□□ -0.45
CNIH3-209ENST00000489556 ZFYVE9O95405 1425 aa12.27□□□□□ -0.45
CNIH3-209ENST00000489556 IFT172Q9UG01 1749 aa12.26□□□□□ -0.45
CNIH3-209ENST00000489556 PLEKHG1Q9ULL1 1385 aa12.26□□□□□ -0.45
CNIH3-209ENST00000489556 RNF39Q9H2S5 420 aa12.25□□□□□ -0.45
CNIH3-209ENST00000489556 IQGAP1P46940 1657 aa12.24□□□□□ -0.45
CNIH3-209ENST00000489556 MYOM2P54296 1465 aa12.24□□□□□ -0.45
CNIH3-209ENST00000489556 CFAP70Q5T0N1 1121 aa12.24□□□□□ -0.45
CNIH3-209ENST00000489556 STRCQ7RTU9 1775 aa12.23□□□□□ -0.45
CNIH3-209ENST00000489556 TBX22Q9Y458 520 aa12.23□□□□□ -0.45
CNIH3-209ENST00000489556 TMEM132EQ6IEE7 984 aa12.22□□□□□ -0.45
CNIH3-209ENST00000489556 C14orf93Q9H972 538 aaKnown RBP12.22□□□□□ -0.45
CNIH3-209ENST00000489556 STK26Q9P289 416 aa12.22□□□□□ -0.45
CNIH3-209ENST00000489556 NBPF8Q3BBV2 869 aa12.21□□□□□ -0.45
CNIH3-209ENST00000489556 MED14O60244 1454 aa12.21□□□□□ -0.46
CNIH3-209ENST00000489556 PIK3C2GO75747 1445 aa12.2□□□□□ -0.46
CNIH3-209ENST00000489556 PRAG1Q86YV5 1406 aa12.2□□□□□ -0.46
CNIH3-209ENST00000489556 ROCK2O75116 1388 aaKnown RBP12.19□□□□□ -0.46
CNIH3-209ENST00000489556 ALKQ9UM73 1620 aa12.19□□□□□ -0.46
CNIH3-209ENST00000489556 SETBP1Q9Y6X0 1596 aa12.19□□□□□ -0.46
CNIH3-209ENST00000489556 LAMC1P11047 1609 aa12.19□□□□□ -0.46
CNIH3-209ENST00000489556 NBPF1Q3BBV0 1214 aa12.18□□□□□ -0.46
CNIH3-209ENST00000489556 CARD11Q9BXL7 1154 aa12.18□□□□□ -0.46
CNIH3-209ENST00000489556 DIP2AQ14689 1571 aa12.18□□□□□ -0.46
CNIH3-209ENST00000489556 NRXN1Q9ULB1 1477 aa12.17□□□□□ -0.46
CNIH3-209ENST00000489556 C14orf37Q86TY3 774 aa12.17□□□□□ -0.46
CNIH3-209ENST00000489556 TRAK1Q9UPV9 953 aa12.17□□□□□ -0.46
CNIH3-209ENST00000489556 AMOTL2Q9Y2J4 779 aa12.17□□□□□ -0.46
CNIH3-209ENST00000489556 ADAMTS13Q76LX8 1427 aa12.17□□□□□ -0.46
CNIH3-209ENST00000489556 METP08581 1390 aa12.17□□□□□ -0.46
CNIH3-209ENST00000489556 NRXN3Q9Y4C0 1643 aa12.16□□□□□ -0.46
CNIH3-209ENST00000489556 POGKQ9P215 609 aa12.16□□□□□ -0.46
CNIH3-209ENST00000489556 TRPM1Q7Z4N2 1603 aa12.15□□□□□ -0.46
CNIH3-209ENST00000489556 KIAA1210Q9ULL0 1709 aa12.15□□□□□ -0.46
CNIH3-209ENST00000489556 KCNA6P17658 529 aa12.15□□□□□ -0.46
CNIH3-209ENST00000489556 PROSER2Q86WR7 435 aaPredicted RBP12.15□□□□□ -0.46
CNIH3-209ENST00000489556 PIK3R4Q99570 1358 aa12.14□□□□□ -0.47
CNIH3-209ENST00000489556 ZNF335Q9H4Z2 1342 aaPredicted RBP12.13□□□□□ -0.47
CNIH3-209ENST00000489556 YTHDC2Q9H6S0 1430 aaKnown RBP12.12□□□□□ -0.47
CNIH3-209ENST00000489556 SAFB2Q14151 953 aaKnown RBP eCLIP12.12□□□□□ -0.47
CNIH3-209ENST00000489556 RALGAPBQ86X10 1494 aa12.12□□□□□ -0.47
CNIH3-209ENST00000489556 SETD1AO15047 1707 aaKnown RBP12.11□□□□□ -0.47
CNIH3-209ENST00000489556 CHD2O14647 1828 aaKnown RBP12.11□□□□□ -0.47
CNIH3-209ENST00000489556 LRPPRCP42704 1394 aaKnown RBP12.11□□□□□ -0.47
CNIH3-209ENST00000489556 EIF3AQ14152 1382 aaKnown RBP12.11□□□□□ -0.47
CNIH3-209ENST00000489556 RBM33Q96EV2 1170 aaKnown RBP12.11□□□□□ -0.47
CNIH3-209ENST00000489556 PRAM1Q96QH2 718 aa12.11□□□□□ -0.47
CNIH3-209ENST00000489556 EIF4G2P78344 907 aaKnown RBP eCLIP12.1□□□□□ -0.47
CNIH3-209ENST00000489556 WAPLQ7Z5K2 1190 aa12.1□□□□□ -0.47
CNIH3-209ENST00000489556 CNKSR2Q8WXI2 1034 aa12.1□□□□□ -0.47
CNIH3-209ENST00000489556 ABCC11Q96J66 1382 aa12.09□□□□□ -0.47
CNIH3-209ENST00000489556 PTPRUQ92729 1446 aa12.09□□□□□ -0.47
CNIH3-209ENST00000489556 RNF216Q9NWF9 866 aaPredicted RBP12.08□□□□□ -0.48
CNIH3-209ENST00000489556 ADGRB1O14514 1584 aa12.08□□□□□ -0.48
CNIH3-209ENST00000489556 CENPJQ9HC77 1338 aaPredicted RBP12.08□□□□□ -0.48
CNIH3-209ENST00000489556 ASXL1Q8IXJ9 1541 aa12.07□□□□□ -0.48
CNIH3-209ENST00000489556 MINK1Q8N4C8 1332 aaPredicted RBP12.07□□□□□ -0.48
CNIH3-209ENST00000489556 USP47Q96K76 1375 aa12.06□□□□□ -0.48
CNIH3-209ENST00000489556 ROBO2Q9HCK4 1378 aa12.06□□□□□ -0.48
CNIH3-209ENST00000489556 ST20-MTHFSA0A0A6YYL1 179 aa12.06□□□□□ -0.48
CNIH3-209ENST00000489556 SIRT1Q96EB6 747 aa12.06□□□□□ -0.48
CNIH3-209ENST00000489556 HIRIP3Q9BW71 556 aaPredicted RBP12.06□□□□□ -0.48
CNIH3-209ENST00000489556 NKTRP30414 1462 aaKnown RBP12.06□□□□□ -0.48
CNIH3-209ENST00000489556 CPS1P31327 1500 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms