RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 ADGRB3O60242 1522 aa20.49■□□□□ 0.87
LINC00173-204ENST00000489452 TET3O43151 1660 aa20.48■□□□□ 0.87
LINC00173-204ENST00000489452 RPRD2Q5VT52 1461 aaKnown RBP20.47■□□□□ 0.87
LINC00173-204ENST00000489452 KDM5AP29375 1690 aaKnown RBP20.47■□□□□ 0.87
LINC00173-204ENST00000489452 XIRP1Q702N8 1843 aaKnown RBP20.46■□□□□ 0.87
LINC00173-204ENST00000489452 RIMS2Q9UQ26 1411 aa20.46■□□□□ 0.87
LINC00173-204ENST00000489452 NUP155O75694 1391 aa20.46■□□□□ 0.87
LINC00173-204ENST00000489452 ROCK1Q13464 1354 aa20.45■□□□□ 0.86
LINC00173-204ENST00000489452 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.43■□□□□ 0.86
LINC00173-204ENST00000489452 ZFYVE9O95405 1425 aa20.43■□□□□ 0.86
LINC00173-204ENST00000489452 FAM135BQ49AJ0 1406 aa20.43■□□□□ 0.86
LINC00173-204ENST00000489452 PLEKHG1Q9ULL1 1385 aa20.42■□□□□ 0.86
LINC00173-204ENST00000489452 SLAIN2Q9P270 581 aa20.41■□□□□ 0.86
LINC00173-204ENST00000489452 TBX22Q9Y458 520 aa20.41■□□□□ 0.86
LINC00173-204ENST00000489452 C14orf37Q86TY3 774 aa20.4■□□□□ 0.86
LINC00173-204ENST00000489452 MYO5BQ9ULV0 1848 aa20.4■□□□□ 0.86
LINC00173-204ENST00000489452 MSH6P52701 1360 aa20.39■□□□□ 0.85
LINC00173-204ENST00000489452 TMEM131LA2VDJ0 1609 aa20.38■□□□□ 0.85
LINC00173-204ENST00000489452 UNC13BO14795 1591 aa20.38■□□□□ 0.85
LINC00173-204ENST00000489452 GCC2Q8IWJ2 1684 aa20.38■□□□□ 0.85
LINC00173-204ENST00000489452 RGS17Q9UGC6 210 aaPredicted RBP20.37■□□□□ 0.85
LINC00173-204ENST00000489452 E9PCH4 1651 aa20.36■□□□□ 0.85
LINC00173-204ENST00000489452 NKTRP30414 1462 aaKnown RBP20.36■□□□□ 0.85
LINC00173-204ENST00000489452 ZNF326Q5BKZ1 582 aaKnown RBP20.33■□□□□ 0.85
LINC00173-204ENST00000489452 NWD1Q149M9 1564 aa20.33■□□□□ 0.84
LINC00173-204ENST00000489452 ROBO1Q9Y6N7 1651 aa20.32■□□□□ 0.84
LINC00173-204ENST00000489452 IQGAP3Q86VI3 1631 aa20.32■□□□□ 0.84
LINC00173-204ENST00000489452 AMOTL2Q9Y2J4 779 aa20.32■□□□□ 0.84
LINC00173-204ENST00000489452 ADAMTS13Q76LX8 1427 aa20.31■□□□□ 0.84
LINC00173-204ENST00000489452 CHD2O14647 1828 aaKnown RBP20.3■□□□□ 0.84
LINC00173-204ENST00000489452 ATF3P18847 181 aa20.29■□□□□ 0.84
LINC00173-204ENST00000489452 C19orf44Q9H6X5 657 aa20.28■□□□□ 0.84
LINC00173-204ENST00000489452 POTEAQ6S8J7 498 aa20.27■□□□□ 0.84
LINC00173-204ENST00000489452 CADPS2Q86UW7 1296 aa20.26■□□□□ 0.83
LINC00173-204ENST00000489452 TRIM52Q96A61 297 aa20.25■□□□□ 0.83
LINC00173-204ENST00000489452 PIK3R4Q99570 1358 aa20.24■□□□□ 0.83
LINC00173-204ENST00000489452 PTPRUQ92729 1446 aa20.23■□□□□ 0.83
LINC00173-204ENST00000489452 NCOA3Q9Y6Q9 1424 aa20.23■□□□□ 0.83
LINC00173-204ENST00000489452 JCADQ9P266 1359 aa20.21■□□□□ 0.83
LINC00173-204ENST00000489452 PHLPP1O60346 1717 aa20.2■□□□□ 0.82
LINC00173-204ENST00000489452 TRPM2O94759 1503 aa20.19■□□□□ 0.82
LINC00173-204ENST00000489452 DIP2AQ14689 1571 aa20.19■□□□□ 0.82
LINC00173-204ENST00000489452 NAIPQ13075 1403 aa20.19■□□□□ 0.82
LINC00173-204ENST00000489452 RRBP1Q9P2E9 1410 aaKnown RBP20.19■□□□□ 0.82
LINC00173-204ENST00000489452 METP08581 1390 aa20.18■□□□□ 0.82
LINC00173-204ENST00000489452 SPHKAPQ2M3C7 1700 aa20.17■□□□□ 0.82
LINC00173-204ENST00000489452 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.17■□□□□ 0.82
LINC00173-204ENST00000489452 MEX3CQ5U5Q3 659 aaKnown RBP20.17■□□□□ 0.82
LINC00173-204ENST00000489452 BRINP3Q76B58 766 aa20.16■□□□□ 0.82
LINC00173-204ENST00000489452 SLC4A1APQ9BWU0 796 aaKnown RBP20.15■□□□□ 0.82
LINC00173-204ENST00000489452 NUTM2BA6NNL0 878 aaPredicted RBP20.14■□□□□ 0.81
LINC00173-204ENST00000489452 NUTM2EB1AL46 878 aaPredicted RBP20.14■□□□□ 0.81
LINC00173-204ENST00000489452 NUTM2AQ8IVF1 878 aaPredicted RBP20.14■□□□□ 0.81
LINC00173-204ENST00000489452 CLTCL1P53675 1640 aa20.12■□□□□ 0.81
LINC00173-204ENST00000489452 SPATA31A6Q5VVP1 1343 aa20.11■□□□□ 0.81
LINC00173-204ENST00000489452 VGFO15240 615 aaPredicted RBP20.11■□□□□ 0.81
LINC00173-204ENST00000489452 FOXD1Q16676 465 aa20.11■□□□□ 0.81
LINC00173-204ENST00000489452 COL16A1Q07092 1604 aaPredicted RBP20.11■□□□□ 0.81
LINC00173-204ENST00000489452 NRXN3Q9Y4C0 1643 aa20.11■□□□□ 0.81
LINC00173-204ENST00000489452 SETBP1Q9Y6X0 1596 aa20.11■□□□□ 0.81
LINC00173-204ENST00000489452 DDX17Q92841 729 aaKnown RBP20.1■□□□□ 0.81
LINC00173-204ENST00000489452 NEXMIFQ5QGS0 1516 aa20.07■□□□□ 0.8
LINC00173-204ENST00000489452 LRP6O75581 1613 aa20.07■□□□□ 0.8
LINC00173-204ENST00000489452 HFM1A2PYH4 1435 aa20.07■□□□□ 0.8
LINC00173-204ENST00000489452 AHDC1Q5TGY3 1603 aaPredicted RBP20.05■□□□□ 0.8
LINC00173-204ENST00000489452 XRN1Q8IZH2 1706 aaKnown RBP20.05■□□□□ 0.8
LINC00173-204ENST00000489452 DCCP43146 1447 aa20.05■□□□□ 0.8
LINC00173-204ENST00000489452 MST1RQ04912 1400 aa20.05■□□□□ 0.8
LINC00173-204ENST00000489452 ZNF772Q68DY9 489 aaPredicted RBP20.05■□□□□ 0.8
LINC00173-204ENST00000489452 RGL3Q3MIN7 710 aa20.04■□□□□ 0.8
LINC00173-204ENST00000489452 KIF1BO60333 1816 aa20.04■□□□□ 0.8
LINC00173-204ENST00000489452 RPGRIP1LQ68CZ1 1315 aa20.03■□□□□ 0.8
LINC00173-204ENST00000489452 LRRC59Q96AG4 307 aaKnown RBP20.03■□□□□ 0.8
LINC00173-204ENST00000489452 ADGRL3Q9HAR2 1447 aa20.02■□□□□ 0.8
LINC00173-204ENST00000489452 ASXL1Q8IXJ9 1541 aa20.02■□□□□ 0.79
LINC00173-204ENST00000489452 ROBO2Q9HCK4 1378 aa20.01■□□□□ 0.79
LINC00173-204ENST00000489452 ORAI2Q96SN7 254 aa20■□□□□ 0.79
LINC00173-204ENST00000489452 RXRBP28702 533 aa19.98■□□□□ 0.79
LINC00173-204ENST00000489452 MPHOSPH9Q99550 1183 aa19.98■□□□□ 0.79
LINC00173-204ENST00000489452 STK26Q9P289 416 aa19.98■□□□□ 0.79
LINC00173-204ENST00000489452 AFF2P51816 1311 aa19.98■□□□□ 0.79
LINC00173-204ENST00000489452 SETD5Q9C0A6 1442 aa19.97■□□□□ 0.79
LINC00173-204ENST00000489452 C8orf37Q96NL8 207 aa19.97■□□□□ 0.79
LINC00173-204ENST00000489452 ADGRF5Q8IZF2 1346 aa19.97■□□□□ 0.79
LINC00173-204ENST00000489452 SHPRHQ149N8 1683 aa19.97■□□□□ 0.79
LINC00173-204ENST00000489452 C1orf167Q5SNV9 1468 aa19.96■□□□□ 0.79
LINC00173-204ENST00000489452 ADAMTS2O95450 1211 aa19.95■□□□□ 0.78
LINC00173-204ENST00000489452 SETD1AO15047 1707 aaKnown RBP19.95■□□□□ 0.78
LINC00173-204ENST00000489452 NALCNQ8IZF0 1738 aa19.93■□□□□ 0.78
LINC00173-204ENST00000489452 PNPLA6Q8IY17 1366 aa19.93■□□□□ 0.78
LINC00173-204ENST00000489452 PTCH1Q13635 1447 aa19.93■□□□□ 0.78
LINC00173-204ENST00000489452 TMEM132EQ6IEE7 984 aa19.92■□□□□ 0.78
LINC00173-204ENST00000489452 WAPLQ7Z5K2 1190 aa19.92■□□□□ 0.78
LINC00173-204ENST00000489452 NGLY1Q96IV0 654 aa19.92■□□□□ 0.78
LINC00173-204ENST00000489452 QTRT2Q9H974 415 aaKnown RBP19.92■□□□□ 0.78
LINC00173-204ENST00000489452 CCDC144AA2RUR9 1427 aa19.92■□□□□ 0.78
LINC00173-204ENST00000489452 NUTM2FA1L443 756 aa19.91■□□□□ 0.78
LINC00173-204ENST00000489452 ESCO1Q5FWF5 840 aa19.91■□□□□ 0.78
LINC00173-204ENST00000489452 NHSL1Q5SYE7 1610 aa19.91■□□□□ 0.78
LINC00173-204ENST00000489452 UPF1Q92900 1129 aaKnown RBP eCLIP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms