RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.22■□□□□ 0.51
COL4A5-206ENST00000489230 IQGAP1P46940 1657 aa18.22■□□□□ 0.51
COL4A5-206ENST00000489230 SYNMO15061 1565 aa18.21■□□□□ 0.51
COL4A5-206ENST00000489230 SENP3Q9H4L4 574 aaPredicted RBP18.2■□□□□ 0.5
COL4A5-206ENST00000489230 TMEM2Q9UHN6 1383 aa18.19■□□□□ 0.5
COL4A5-206ENST00000489230 CCDC144AA2RUR9 1427 aa18.19■□□□□ 0.5
COL4A5-206ENST00000489230 KDM5AP29375 1690 aaKnown RBP18.18■□□□□ 0.5
COL4A5-206ENST00000489230 TRPM2O94759 1503 aa18.18■□□□□ 0.5
COL4A5-206ENST00000489230 ZNF326Q5BKZ1 582 aaKnown RBP18.18■□□□□ 0.5
COL4A5-206ENST00000489230 SPHKAPQ2M3C7 1700 aa18.17■□□□□ 0.5
COL4A5-206ENST00000489230 RPGRIP1LQ68CZ1 1315 aa18.17■□□□□ 0.5
COL4A5-206ENST00000489230 PIK3C2BO00750 1634 aa18.16■□□□□ 0.5
COL4A5-206ENST00000489230 ANKRD30BQ9BXX2 1392 aa18.16■□□□□ 0.5
COL4A5-206ENST00000489230 ALKQ9UM73 1620 aa18.16■□□□□ 0.5
COL4A5-206ENST00000489230 LRRC7Q96NW7 1537 aa18.15■□□□□ 0.5
COL4A5-206ENST00000489230 UBR1Q8IWV7 1749 aa18.15■□□□□ 0.5
COL4A5-206ENST00000489230 ADGRB3O60242 1522 aa18.14■□□□□ 0.49
COL4A5-206ENST00000489230 SLIT1O75093 1534 aa18.14■□□□□ 0.49
COL4A5-206ENST00000489230 PPP1R15AO75807 674 aaPredicted RBP18.14■□□□□ 0.49
COL4A5-206ENST00000489230 LTKP29376 864 aa18.14■□□□□ 0.49
COL4A5-206ENST00000489230 ARHGAP23Q9P227 1491 aa18.14■□□□□ 0.49
COL4A5-206ENST00000489230 VGFO15240 615 aaPredicted RBP18.13■□□□□ 0.49
COL4A5-206ENST00000489230 STRCP1A6NGW2 1772 aa18.12■□□□□ 0.49
COL4A5-206ENST00000489230 BCANQ96GW7 911 aa18.12■□□□□ 0.49
COL4A5-206ENST00000489230 RIMS2Q9UQ26 1411 aa18.11■□□□□ 0.49
COL4A5-206ENST00000489230 SCAF11Q99590 1463 aaKnown RBP18.11■□□□□ 0.49
COL4A5-206ENST00000489230 TMEM131LA2VDJ0 1609 aa18.11■□□□□ 0.49
COL4A5-206ENST00000489230 STAC3Q96MF2 364 aa18.1■□□□□ 0.49
COL4A5-206ENST00000489230 RGL3Q3MIN7 710 aa18.09■□□□□ 0.49
COL4A5-206ENST00000489230 CLTCL1P53675 1640 aa18.08■□□□□ 0.48
COL4A5-206ENST00000489230 ZFYVE9O95405 1425 aa18.06■□□□□ 0.48
COL4A5-206ENST00000489230 KIF1BO60333 1816 aa18.06■□□□□ 0.48
COL4A5-206ENST00000489230 DHX57Q6P158 1386 aaKnown RBP18.05■□□□□ 0.48
COL4A5-206ENST00000489230 PLEKHG1Q9ULL1 1385 aa18.05■□□□□ 0.48
COL4A5-206ENST00000489230 NUTM2DQ5VT03 806 aaPredicted RBP18.04■□□□□ 0.48
COL4A5-206ENST00000489230 TBX22Q9Y458 520 aa18.04■□□□□ 0.48
COL4A5-206ENST00000489230 SPATA31E1Q6ZUB1 1445 aa18.04■□□□□ 0.48
COL4A5-206ENST00000489230 SLC26A8Q96RN1 970 aa18■□□□□ 0.47
COL4A5-206ENST00000489230 CLSPNQ9HAW4 1339 aa17.98■□□□□ 0.47
COL4A5-206ENST00000489230 MYO5BQ9ULV0 1848 aa17.98■□□□□ 0.47
COL4A5-206ENST00000489230 NEUROD1Q13562 356 aa17.98■□□□□ 0.47
COL4A5-206ENST00000489230 DCAF11Q8TEB1 546 aa17.98■□□□□ 0.47
COL4A5-206ENST00000489230 RGS17Q9UGC6 210 aaPredicted RBP17.97■□□□□ 0.47
COL4A5-206ENST00000489230 FAM135BQ49AJ0 1406 aa17.97■□□□□ 0.47
COL4A5-206ENST00000489230 XIRP1Q702N8 1843 aaKnown RBP17.96■□□□□ 0.47
COL4A5-206ENST00000489230 KCNA6P17658 529 aa17.96■□□□□ 0.47
COL4A5-206ENST00000489230 SIN3AQ96ST3 1273 aa17.96■□□□□ 0.47
COL4A5-206ENST00000489230 NEXMIFQ5QGS0 1516 aa17.96■□□□□ 0.47
COL4A5-206ENST00000489230 TMEM94Q12767 1356 aa17.95■□□□□ 0.46
COL4A5-206ENST00000489230 PIK3R4Q99570 1358 aa17.95■□□□□ 0.46
COL4A5-206ENST00000489230 KDM2AQ9Y2K7 1162 aa17.94■□□□□ 0.46
COL4A5-206ENST00000489230 PROSER2Q86WR7 435 aaPredicted RBP17.93■□□□□ 0.46
COL4A5-206ENST00000489230 CCER1Q8TC90 406 aaPredicted RBP17.93■□□□□ 0.46
COL4A5-206ENST00000489230 ADGRF5Q8IZF2 1346 aa17.93■□□□□ 0.46
COL4A5-206ENST00000489230 ADAMTS13Q76LX8 1427 aa17.9■□□□□ 0.46
COL4A5-206ENST00000489230 L3MBTL2Q969R5 705 aa17.9■□□□□ 0.46
COL4A5-206ENST00000489230 C14orf93Q9H972 538 aaKnown RBP17.9■□□□□ 0.46
COL4A5-206ENST00000489230 TIMELESSQ9UNS1 1208 aa17.9■□□□□ 0.46
COL4A5-206ENST00000489230 ROBO1Q9Y6N7 1651 aa17.9■□□□□ 0.46
COL4A5-206ENST00000489230 DIP2AQ14689 1571 aa17.89■□□□□ 0.45
COL4A5-206ENST00000489230 SETBP1Q9Y6X0 1596 aa17.89■□□□□ 0.45
COL4A5-206ENST00000489230 RBM33Q96EV2 1170 aaKnown RBP17.89■□□□□ 0.45
COL4A5-206ENST00000489230 POTEAQ6S8J7 498 aa17.88■□□□□ 0.45
COL4A5-206ENST00000489230 AMOTL2Q9Y2J4 779 aa17.88■□□□□ 0.45
COL4A5-206ENST00000489230 PPLO60437 1756 aa17.88■□□□□ 0.45
COL4A5-206ENST00000489230 MYOM2P54296 1465 aa17.88■□□□□ 0.45
COL4A5-206ENST00000489230 MSH6P52701 1360 aa17.87■□□□□ 0.45
COL4A5-206ENST00000489230 NKTRP30414 1462 aaKnown RBP17.86■□□□□ 0.45
COL4A5-206ENST00000489230 PIK3C2GO75747 1445 aa17.85■□□□□ 0.45
COL4A5-206ENST00000489230 TONSLQ96HA7 1378 aa17.85■□□□□ 0.45
COL4A5-206ENST00000489230 NRXN1Q9ULB1 1477 aa17.84■□□□□ 0.45
COL4A5-206ENST00000489230 METP08581 1390 aa17.84■□□□□ 0.45
COL4A5-206ENST00000489230 CFAP70Q5T0N1 1121 aa17.84■□□□□ 0.45
COL4A5-206ENST00000489230 NWD1Q149M9 1564 aa17.83■□□□□ 0.44
COL4A5-206ENST00000489230 SLAIN2Q9P270 581 aa17.82■□□□□ 0.44
COL4A5-206ENST00000489230 IFT172Q9UG01 1749 aa17.81■□□□□ 0.44
COL4A5-206ENST00000489230 SIRT1Q96EB6 747 aa17.81■□□□□ 0.44
COL4A5-206ENST00000489230 NCOA3Q9Y6Q9 1424 aa17.81■□□□□ 0.44
COL4A5-206ENST00000489230 JCADQ9P266 1359 aa17.8■□□□□ 0.44
COL4A5-206ENST00000489230 TMEM132EQ6IEE7 984 aa17.8■□□□□ 0.44
COL4A5-206ENST00000489230 PHLPP1O60346 1717 aa17.8■□□□□ 0.44
COL4A5-206ENST00000489230 NRXN3Q9Y4C0 1643 aa17.8■□□□□ 0.44
COL4A5-206ENST00000489230 ABCC11Q96J66 1382 aa17.79■□□□□ 0.44
COL4A5-206ENST00000489230 CHD2O14647 1828 aaKnown RBP17.78■□□□□ 0.44
COL4A5-206ENST00000489230 STK26Q9P289 416 aa17.78■□□□□ 0.44
COL4A5-206ENST00000489230 LRPPRCP42704 1394 aaKnown RBP17.78■□□□□ 0.44
COL4A5-206ENST00000489230 C14orf37Q86TY3 774 aa17.77■□□□□ 0.44
COL4A5-206ENST00000489230 C19orf44Q9H6X5 657 aa17.77■□□□□ 0.44
COL4A5-206ENST00000489230 PTPRUQ92729 1446 aa17.77■□□□□ 0.44
COL4A5-206ENST00000489230 PRAG1Q86YV5 1406 aa17.75■□□□□ 0.43
COL4A5-206ENST00000489230 MEX3CQ5U5Q3 659 aaKnown RBP17.75■□□□□ 0.43
COL4A5-206ENST00000489230 LAMC1P11047 1609 aa17.74■□□□□ 0.43
COL4A5-206ENST00000489230 SETD1AO15047 1707 aaKnown RBP17.74■□□□□ 0.43
COL4A5-206ENST00000489230 YTHDC2Q9H6S0 1430 aaKnown RBP17.73■□□□□ 0.43
COL4A5-206ENST00000489230 ATF3P18847 181 aa17.72■□□□□ 0.43
COL4A5-206ENST00000489230 POGKQ9P215 609 aa17.72■□□□□ 0.43
COL4A5-206ENST00000489230 SPATA31A6Q5VVP1 1343 aa17.72■□□□□ 0.43
COL4A5-206ENST00000489230 CADPS2Q86UW7 1296 aa17.71■□□□□ 0.43
COL4A5-206ENST00000489230 PTCH1Q13635 1447 aa17.71■□□□□ 0.43
COL4A5-206ENST00000489230 COL16A1Q07092 1604 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms