RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 ZMYM3Q14202 1370 aa12.46□□□□□ -0.41
EXOSC1-211ENST00000489158 ANP32CO43423 234 aa12.46□□□□□ -0.41
EXOSC1-211ENST00000489158 NBPF8Q3BBV2 869 aa12.46□□□□□ -0.41
EXOSC1-211ENST00000489158 LAMC1P11047 1609 aa12.46□□□□□ -0.41
EXOSC1-211ENST00000489158 MADDQ8WXG6 1647 aa12.46□□□□□ -0.41
EXOSC1-211ENST00000489158 KIAA1210Q9ULL0 1709 aa12.46□□□□□ -0.42
EXOSC1-211ENST00000489158 PPLO60437 1756 aa12.46□□□□□ -0.42
EXOSC1-211ENST00000489158 KDM5AP29375 1690 aaKnown RBP12.45□□□□□ -0.42
EXOSC1-211ENST00000489158 RPGRIP1LQ68CZ1 1315 aa12.45□□□□□ -0.42
EXOSC1-211ENST00000489158 TMEM131LA2VDJ0 1609 aa12.44□□□□□ -0.42
EXOSC1-211ENST00000489158 C3P01024 1663 aa12.44□□□□□ -0.42
EXOSC1-211ENST00000489158 CHGAP10645 457 aaKnown RBP12.44□□□□□ -0.42
EXOSC1-211ENST00000489158 ADAMTSL3P82987 1691 aa12.43□□□□□ -0.42
EXOSC1-211ENST00000489158 NRXN1Q9ULB1 1477 aa12.42□□□□□ -0.42
EXOSC1-211ENST00000489158 GPRASP1Q5JY77 1395 aa12.41□□□□□ -0.42
EXOSC1-211ENST00000489158 NEXMIFQ5QGS0 1516 aa12.41□□□□□ -0.42
EXOSC1-211ENST00000489158 MYO5BQ9ULV0 1848 aa12.41□□□□□ -0.42
EXOSC1-211ENST00000489158 EIF4G2P78344 907 aaKnown RBP eCLIP12.4□□□□□ -0.42
EXOSC1-211ENST00000489158 IDI1Q13907 227 aa12.4□□□□□ -0.42
EXOSC1-211ENST00000489158 FBXO31Q5XUX0 539 aaPredicted RBP12.4□□□□□ -0.42
EXOSC1-211ENST00000489158 TNRQ92752 1358 aa12.4□□□□□ -0.42
EXOSC1-211ENST00000489158 MSH5O43196 834 aa12.4□□□□□ -0.43
EXOSC1-211ENST00000489158 ZFYVE9O95405 1425 aa12.4□□□□□ -0.43
EXOSC1-211ENST00000489158 NLRP1Q9C000 1473 aa12.4□□□□□ -0.43
EXOSC1-211ENST00000489158 RIMS1Q86UR5 1692 aaKnown RBP12.39□□□□□ -0.43
EXOSC1-211ENST00000489158 ROCK2O75116 1388 aaKnown RBP12.38□□□□□ -0.43
EXOSC1-211ENST00000489158 POLR1AO95602 1720 aaPredicted RBP12.38□□□□□ -0.43
EXOSC1-211ENST00000489158 HSPA5P11021 654 aaKnown RBP12.37□□□□□ -0.43
EXOSC1-211ENST00000489158 CARD11Q9BXL7 1154 aa12.37□□□□□ -0.43
EXOSC1-211ENST00000489158 SETBP1Q9Y6X0 1596 aa12.37□□□□□ -0.43
EXOSC1-211ENST00000489158 A2ML1A8K2U0 1454 aa12.37□□□□□ -0.43
EXOSC1-211ENST00000489158 UBR1Q8IWV7 1749 aa12.36□□□□□ -0.43
EXOSC1-211ENST00000489158 PIK3C2GO75747 1445 aa12.36□□□□□ -0.43
EXOSC1-211ENST00000489158 USP47Q96K76 1375 aa12.36□□□□□ -0.43
EXOSC1-211ENST00000489158 IQGAP1P46940 1657 aa12.35□□□□□ -0.43
EXOSC1-211ENST00000489158 VGFO15240 615 aaPredicted RBP12.35□□□□□ -0.43
EXOSC1-211ENST00000489158 STAG3Q9UJ98 1225 aa12.35□□□□□ -0.43
EXOSC1-211ENST00000489158 MYO3AQ8NEV4 1616 aa12.34□□□□□ -0.43
EXOSC1-211ENST00000489158 KDM4FA0A1W2PPD8 638 aa12.34□□□□□ -0.43
EXOSC1-211ENST00000489158 PLPPR3Q6T4P5 718 aa12.34□□□□□ -0.43
EXOSC1-211ENST00000489158 IRX6P78412 446 aaPredicted RBP12.33□□□□□ -0.44
EXOSC1-211ENST00000489158 ADGRF5Q8IZF2 1346 aa12.33□□□□□ -0.44
EXOSC1-211ENST00000489158 NBPF1Q3BBV0 1214 aa12.32□□□□□ -0.44
EXOSC1-211ENST00000489158 SCAF11Q99590 1463 aaKnown RBP12.32□□□□□ -0.44
EXOSC1-211ENST00000489158 FANCIQ9NVI1 1328 aa12.32□□□□□ -0.44
EXOSC1-211ENST00000489158 ZNF142P52746 1687 aaPredicted RBP12.31□□□□□ -0.44
EXOSC1-211ENST00000489158 HDGFP51858 240 aaKnown RBP12.31□□□□□ -0.44
EXOSC1-211ENST00000489158 HNRNPUQ00839 825 aaKnown RBP eCLIP12.31□□□□□ -0.44
EXOSC1-211ENST00000489158 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.31□□□□□ -0.44
EXOSC1-211ENST00000489158 RIMS2Q9UQ26 1411 aa12.31□□□□□ -0.44
EXOSC1-211ENST00000489158 NUTM2DQ5VT03 806 aaPredicted RBP12.31□□□□□ -0.44
EXOSC1-211ENST00000489158 EIF3AQ14152 1382 aaKnown RBP12.3□□□□□ -0.44
EXOSC1-211ENST00000489158 CEBPAP49715 358 aaPredicted RBP12.3□□□□□ -0.44
EXOSC1-211ENST00000489158 C14orf93Q9H972 538 aaKnown RBP12.3□□□□□ -0.44
EXOSC1-211ENST00000489158 ADGRB1O14514 1584 aa12.29□□□□□ -0.44
EXOSC1-211ENST00000489158 SLIT1O75093 1534 aa12.29□□□□□ -0.44
EXOSC1-211ENST00000489158 CEP170BQ9Y4F5 1589 aaPredicted RBP12.29□□□□□ -0.44
EXOSC1-211ENST00000489158 SETD1BQ9UPS6 1966 aaKnown RBP12.29□□□□□ -0.44
EXOSC1-211ENST00000489158 TMEM2Q9UHN6 1383 aa12.28□□□□□ -0.44
EXOSC1-211ENST00000489158 ARHGAP23Q9P227 1491 aa12.28□□□□□ -0.44
EXOSC1-211ENST00000489158 ERICH6Q7L0X2 663 aa12.28□□□□□ -0.44
EXOSC1-211ENST00000489158 CFAP70Q5T0N1 1121 aa12.27□□□□□ -0.45
EXOSC1-211ENST00000489158 PTPRMP28827 1452 aa12.27□□□□□ -0.45
EXOSC1-211ENST00000489158 ST20-MTHFSA0A0A6YYL1 179 aa12.26□□□□□ -0.45
EXOSC1-211ENST00000489158 SLC24A1O60721 1099 aa12.26□□□□□ -0.45
EXOSC1-211ENST00000489158 SENP3Q9H4L4 574 aaPredicted RBP12.26□□□□□ -0.45
EXOSC1-211ENST00000489158 SETD1AO15047 1707 aaKnown RBP12.26□□□□□ -0.45
EXOSC1-211ENST00000489158 ALKQ9UM73 1620 aa12.26□□□□□ -0.45
EXOSC1-211ENST00000489158 POLR3GLQ9BT43 218 aa12.25□□□□□ -0.45
EXOSC1-211ENST00000489158 WASHC2AQ641Q2 1341 aa12.25□□□□□ -0.45
EXOSC1-211ENST00000489158 CCDC7Q96M83 1385 aa12.25□□□□□ -0.45
EXOSC1-211ENST00000489158 NRXN3Q9Y4C0 1643 aa12.25□□□□□ -0.45
EXOSC1-211ENST00000489158 THEMISQ8N1K5 641 aaPredicted RBP12.24□□□□□ -0.45
EXOSC1-211ENST00000489158 ARHGEF28Q8N1W1 1705 aaKnown RBP12.24□□□□□ -0.45
EXOSC1-211ENST00000489158 ASXL1Q8IXJ9 1541 aa12.24□□□□□ -0.45
EXOSC1-211ENST00000489158 SBNO2Q9Y2G9 1366 aa12.23□□□□□ -0.45
EXOSC1-211ENST00000489158 C11orf95C9JLR9 678 aaPredicted RBP12.23□□□□□ -0.45
EXOSC1-211ENST00000489158 PLEKHG1Q9ULL1 1385 aa12.22□□□□□ -0.45
EXOSC1-211ENST00000489158 PPP4R2Q9NY27 417 aa12.22□□□□□ -0.45
EXOSC1-211ENST00000489158 EID1Q9Y6B2 187 aa12.22□□□□□ -0.45
EXOSC1-211ENST00000489158 DIP2AQ14689 1571 aa12.22□□□□□ -0.45
EXOSC1-211ENST00000489158 KNDC1Q76NI1 1749 aa12.21□□□□□ -0.45
EXOSC1-211ENST00000489158 KIF7Q2M1P5 1343 aa12.21□□□□□ -0.45
EXOSC1-211ENST00000489158 ERICH6BQ5W0A0 696 aa12.21□□□□□ -0.45
EXOSC1-211ENST00000489158 DLC1Q96QB1 1528 aa12.21□□□□□ -0.45
EXOSC1-211ENST00000489158 QRICH2Q9H0J4 1663 aa12.21□□□□□ -0.46
EXOSC1-211ENST00000489158 TMEM132EQ6IEE7 984 aa12.2□□□□□ -0.46
EXOSC1-211ENST00000489158 TESK2Q96S53 571 aa12.2□□□□□ -0.46
EXOSC1-211ENST00000489158 TMF1P82094 1093 aa12.2□□□□□ -0.46
EXOSC1-211ENST00000489158 YTHDC2Q9H6S0 1430 aaKnown RBP12.19□□□□□ -0.46
EXOSC1-211ENST00000489158 CCDC184Q52MB2 194 aa12.19□□□□□ -0.46
EXOSC1-211ENST00000489158 CDCA8Q53HL2 280 aa12.19□□□□□ -0.46
EXOSC1-211ENST00000489158 CENPJQ9HC77 1338 aaPredicted RBP12.18□□□□□ -0.46
EXOSC1-211ENST00000489158 TRAK1Q9UPV9 953 aa12.18□□□□□ -0.46
EXOSC1-211ENST00000489158 MED14O60244 1454 aa12.18□□□□□ -0.46
EXOSC1-211ENST00000489158 TXNDC2Q86VQ3 553 aa12.17□□□□□ -0.46
EXOSC1-211ENST00000489158 LRPPRCP42704 1394 aaKnown RBP12.17□□□□□ -0.46
EXOSC1-211ENST00000489158 ADAMTS13Q76LX8 1427 aa12.17□□□□□ -0.46
EXOSC1-211ENST00000489158 TECPR2O15040 1411 aa12.16□□□□□ -0.46
EXOSC1-211ENST00000489158 CPS1P31327 1500 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms