RNA–Protein interactions for RNA: ENST00000488946.1

RPL13A-212, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-212ENST00000488946 ZC3H13Q5T200 1668 aaKnown RBP19.41■□□□□ 0.7
RPL13A-212ENST00000488946 RBM19Q9Y4C8 960 aaKnown RBP19.4■□□□□ 0.7
RPL13A-212ENST00000488946 REREQ9P2R6 1566 aa19.4■□□□□ 0.7
RPL13A-212ENST00000488946 NPATQ14207 1427 aa19.4■□□□□ 0.7
RPL13A-212ENST00000488946 CCDC184Q52MB2 194 aa19.37■□□□□ 0.69
RPL13A-212ENST00000488946 TESK2Q96S53 571 aa19.37■□□□□ 0.69
RPL13A-212ENST00000488946 SLC24A1O60721 1099 aa19.37■□□□□ 0.69
RPL13A-212ENST00000488946 NRXN1Q9ULB1 1477 aa19.37■□□□□ 0.69
RPL13A-212ENST00000488946 SIGLEC1Q9BZZ2 1709 aa19.36■□□□□ 0.69
RPL13A-212ENST00000488946 SCAF11Q99590 1463 aaKnown RBP19.35■□□□□ 0.69
RPL13A-212ENST00000488946 POLR3GLQ9BT43 218 aa19.35■□□□□ 0.69
RPL13A-212ENST00000488946 KTN1Q86UP2 1357 aaKnown RBP19.34■□□□□ 0.69
RPL13A-212ENST00000488946 MSH5O43196 834 aa19.34■□□□□ 0.69
RPL13A-212ENST00000488946 PIK3C2BO00750 1634 aa19.34■□□□□ 0.69
RPL13A-212ENST00000488946 AGLP35573 1532 aa19.34■□□□□ 0.69
RPL13A-212ENST00000488946 DISP3Q9P2K9 1392 aa19.34■□□□□ 0.69
RPL13A-212ENST00000488946 PPLO60437 1756 aa19.33■□□□□ 0.68
RPL13A-212ENST00000488946 MRS2Q9HD23 443 aa19.33■□□□□ 0.68
RPL13A-212ENST00000488946 NOS1P29475 1434 aa19.32■□□□□ 0.68
RPL13A-212ENST00000488946 ARHGAP31Q2M1Z3 1444 aa19.32■□□□□ 0.68
RPL13A-212ENST00000488946 KDM4FA0A1W2PPD8 638 aa19.3■□□□□ 0.68
RPL13A-212ENST00000488946 SYNMO15061 1565 aa19.3■□□□□ 0.68
RPL13A-212ENST00000488946 HNRNPUQ00839 825 aaKnown RBP eCLIP19.29■□□□□ 0.68
RPL13A-212ENST00000488946 MLECQ14165 292 aa19.29■□□□□ 0.68
RPL13A-212ENST00000488946 UBE2Q2Q8WVN8 375 aa19.29■□□□□ 0.68
RPL13A-212ENST00000488946 GGT6Q6P531 493 aa19.28■□□□□ 0.68
RPL13A-212ENST00000488946 ADAMTSL3P82987 1691 aa19.28■□□□□ 0.68
RPL13A-212ENST00000488946 SETBP1Q9Y6X0 1596 aa19.28■□□□□ 0.68
RPL13A-212ENST00000488946 MYO3AQ8NEV4 1616 aa19.28■□□□□ 0.68
RPL13A-212ENST00000488946 TMF1P82094 1093 aa19.27■□□□□ 0.68
RPL13A-212ENST00000488946 WASHC2CQ9Y4E1 1318 aa19.27■□□□□ 0.67
RPL13A-212ENST00000488946 EIF3AQ14152 1382 aaKnown RBP19.26■□□□□ 0.67
RPL13A-212ENST00000488946 CFAP65Q6ZU64 1925 aaKnown RBP19.25■□□□□ 0.67
RPL13A-212ENST00000488946 PARD3Q8TEW0 1356 aa19.24■□□□□ 0.67
RPL13A-212ENST00000488946 RALBP1Q15311 655 aa19.24■□□□□ 0.67
RPL13A-212ENST00000488946 ADGRF5Q8IZF2 1346 aa19.23■□□□□ 0.67
RPL13A-212ENST00000488946 FER1L4A9Z1Z3 1794 aa19.23■□□□□ 0.67
RPL13A-212ENST00000488946 PIK3C2GO75747 1445 aa19.23■□□□□ 0.67
RPL13A-212ENST00000488946 MYOM1P52179 1685 aa19.23■□□□□ 0.67
RPL13A-212ENST00000488946 PREX1Q8TCU6 1659 aa19.22■□□□□ 0.67
RPL13A-212ENST00000488946 PER1O15534 1290 aaPredicted RBP19.22■□□□□ 0.67
RPL13A-212ENST00000488946 SALL2Q9Y467 1007 aaPredicted RBP19.22■□□□□ 0.67
RPL13A-212ENST00000488946 MYBBP1AQ9BQG0 1328 aaKnown RBP19.22■□□□□ 0.67
RPL13A-212ENST00000488946 BRD4O60885 1362 aaPredicted RBP19.22■□□□□ 0.67
RPL13A-212ENST00000488946 ZBED9Q6R2W3 1325 aa19.21■□□□□ 0.67
RPL13A-212ENST00000488946 DEKP35659 375 aaKnown RBP19.21■□□□□ 0.67
RPL13A-212ENST00000488946 FAM9BQ8IZU0 186 aa19.21■□□□□ 0.67
RPL13A-212ENST00000488946 KDM5AP29375 1690 aaKnown RBP19.21■□□□□ 0.67
RPL13A-212ENST00000488946 ESF1Q9H501 851 aaKnown RBP19.2■□□□□ 0.66
RPL13A-212ENST00000488946 RPGRIP1LQ68CZ1 1315 aa19.2■□□□□ 0.66
RPL13A-212ENST00000488946 PPP6R1Q9UPN7 881 aa19.2■□□□□ 0.66
RPL13A-212ENST00000488946 NEXMIFQ5QGS0 1516 aa19.2■□□□□ 0.66
RPL13A-212ENST00000488946 ERICH6BQ5W0A0 696 aa19.19■□□□□ 0.66
RPL13A-212ENST00000488946 RIMS1Q86UR5 1692 aaKnown RBP19.19■□□□□ 0.66
RPL13A-212ENST00000488946 ADGRB1O14514 1584 aa19.19■□□□□ 0.66
RPL13A-212ENST00000488946 CFAP70Q5T0N1 1121 aa19.18■□□□□ 0.66
RPL13A-212ENST00000488946 LRPPRCP42704 1394 aaKnown RBP19.17■□□□□ 0.66
RPL13A-212ENST00000488946 SBNO2Q9Y2G9 1366 aa19.17■□□□□ 0.66
RPL13A-212ENST00000488946 CDCA8Q53HL2 280 aa19.16■□□□□ 0.66
RPL13A-212ENST00000488946 AEBP2Q6ZN18 517 aaPredicted RBP19.16■□□□□ 0.66
RPL13A-212ENST00000488946 PNISRQ8TF01 805 aaKnown RBP19.16■□□□□ 0.66
RPL13A-212ENST00000488946 ERVK-7P63135 1459 aa19.15■□□□□ 0.66
RPL13A-212ENST00000488946 FANCIQ9NVI1 1328 aa19.15■□□□□ 0.66
RPL13A-212ENST00000488946 PTPRMP28827 1452 aa19.15■□□□□ 0.66
RPL13A-212ENST00000488946 TMEM131LA2VDJ0 1609 aa19.14■□□□□ 0.65
RPL13A-212ENST00000488946 PANK3Q9H999 370 aa19.13■□□□□ 0.65
RPL13A-212ENST00000488946 CLTCQ00610 1675 aaKnown RBP19.13■□□□□ 0.65
RPL13A-212ENST00000488946 ZFYVE9O95405 1425 aa19.12■□□□□ 0.65
RPL13A-212ENST00000488946 MYO5BQ9ULV0 1848 aa19.12■□□□□ 0.65
RPL13A-212ENST00000488946 NLRP13Q86W25 1043 aa19.12■□□□□ 0.65
RPL13A-212ENST00000488946 TMC1Q8TDI8 760 aa19.12■□□□□ 0.65
RPL13A-212ENST00000488946 C14orf93Q9H972 538 aaKnown RBP19.12■□□□□ 0.65
RPL13A-212ENST00000488946 CHGAP10645 457 aaKnown RBP19.11■□□□□ 0.65
RPL13A-212ENST00000488946 CNGB1Q14028 1251 aaPredicted RBP19.11■□□□□ 0.65
RPL13A-212ENST00000488946 QRICH2Q9H0J4 1663 aa19.11■□□□□ 0.65
RPL13A-212ENST00000488946 SLC52A1Q9NWF4 448 aa19.1■□□□□ 0.65
RPL13A-212ENST00000488946 ARHGEF28Q8N1W1 1705 aaKnown RBP19.08■□□□□ 0.64
RPL13A-212ENST00000488946 ASXL1Q8IXJ9 1541 aa19.08■□□□□ 0.64
RPL13A-212ENST00000488946 INSRP06213 1382 aa19.07■□□□□ 0.64
RPL13A-212ENST00000488946 ZMYM3Q14202 1370 aa19.07■□□□□ 0.64
RPL13A-212ENST00000488946 C3P01024 1663 aa19.07■□□□□ 0.64
RPL13A-212ENST00000488946 NPC1L1Q9UHC9 1359 aa19.07■□□□□ 0.64
RPL13A-212ENST00000488946 PLPPR3Q6T4P5 718 aa19.07■□□□□ 0.64
RPL13A-212ENST00000488946 SPATA31D1Q6ZQQ2 1576 aa19.06■□□□□ 0.64
RPL13A-212ENST00000488946 CCDC136Q96JN2 1154 aa19.06■□□□□ 0.64
RPL13A-212ENST00000488946 IDI1Q13907 227 aa19.06■□□□□ 0.64
RPL13A-212ENST00000488946 CEBPAP49715 358 aaPredicted RBP19.05■□□□□ 0.64
RPL13A-212ENST00000488946 SMG6Q86US8 1419 aaKnown RBP19.05■□□□□ 0.64
RPL13A-212ENST00000488946 SETD1BQ9UPS6 1966 aaKnown RBP19.05■□□□□ 0.64
RPL13A-212ENST00000488946 CENPJQ9HC77 1338 aaPredicted RBP19.04■□□□□ 0.64
RPL13A-212ENST00000488946 VGFO15240 615 aaPredicted RBP19.03■□□□□ 0.64
RPL13A-212ENST00000488946 IRX6P78412 446 aaPredicted RBP19.03■□□□□ 0.64
RPL13A-212ENST00000488946 AMER1Q5JTC6 1135 aaPredicted RBP19.03■□□□□ 0.64
RPL13A-212ENST00000488946 CC2D1BQ5T0F9 858 aaKnown RBP19.02■□□□□ 0.64
RPL13A-212ENST00000488946 KNSTRNQ9Y448 316 aa19■□□□□ 0.63
RPL13A-212ENST00000488946 BLMP54132 1417 aaPredicted RBP19■□□□□ 0.63
RPL13A-212ENST00000488946 TRAK1Q9UPV9 953 aa18.97■□□□□ 0.63
RPL13A-212ENST00000488946 USP32Q8NFA0 1604 aa18.97■□□□□ 0.63
RPL13A-212ENST00000488946 TULP4Q9NRJ4 1543 aa18.96■□□□□ 0.63
RPL13A-212ENST00000488946 FBXO31Q5XUX0 539 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 162.6 ms