RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 SPHKAPQ2M3C7 1700 aa10.83□□□□□ -0.68
APOBEC3A-203ENST00000488758 ZMYM3Q14202 1370 aa10.82□□□□□ -0.68
APOBEC3A-203ENST00000488758 RGL3Q3MIN7 710 aa10.82□□□□□ -0.68
APOBEC3A-203ENST00000488758 TRPM2O94759 1503 aa10.82□□□□□ -0.68
APOBEC3A-203ENST00000488758 CNTLNQ9NXG0 1405 aa10.82□□□□□ -0.68
APOBEC3A-203ENST00000488758 CLTCQ00610 1675 aaKnown RBP10.82□□□□□ -0.68
APOBEC3A-203ENST00000488758 CHGAP10645 457 aaKnown RBP10.81□□□□□ -0.68
APOBEC3A-203ENST00000488758 HSPA2P54652 639 aa10.81□□□□□ -0.68
APOBEC3A-203ENST00000488758 FBXO31Q5XUX0 539 aaPredicted RBP10.8□□□□□ -0.68
APOBEC3A-203ENST00000488758 DCAF11Q8TEB1 546 aa10.8□□□□□ -0.68
APOBEC3A-203ENST00000488758 KDM2AQ9Y2K7 1162 aa10.8□□□□□ -0.68
APOBEC3A-203ENST00000488758 NOS1P29475 1434 aa10.79□□□□□ -0.68
APOBEC3A-203ENST00000488758 ILDR2Q71H61 639 aa10.79□□□□□ -0.68
APOBEC3A-203ENST00000488758 SLC52A1Q9NWF4 448 aa10.79□□□□□ -0.68
APOBEC3A-203ENST00000488758 SSUH2Q9Y2M2 353 aa10.79□□□□□ -0.68
APOBEC3A-203ENST00000488758 ZNF692Q9BU19 519 aaPredicted RBP10.78□□□□□ -0.68
APOBEC3A-203ENST00000488758 IDI1Q13907 227 aa10.77□□□□□ -0.69
APOBEC3A-203ENST00000488758 ZNF326Q5BKZ1 582 aaKnown RBP10.77□□□□□ -0.69
APOBEC3A-203ENST00000488758 REM2Q8IYK8 340 aaPredicted RBP10.77□□□□□ -0.69
APOBEC3A-203ENST00000488758 STAC3Q96MF2 364 aa10.77□□□□□ -0.69
APOBEC3A-203ENST00000488758 STAG3Q9UJ98 1225 aa10.77□□□□□ -0.69
APOBEC3A-203ENST00000488758 CLTCL1P53675 1640 aa10.76□□□□□ -0.69
APOBEC3A-203ENST00000488758 ERVK-7P63135 1459 aa10.76□□□□□ -0.69
APOBEC3A-203ENST00000488758 FER1L4A9Z1Z3 1794 aa10.76□□□□□ -0.69
APOBEC3A-203ENST00000488758 CERKQ8TCT0 537 aa10.76□□□□□ -0.69
APOBEC3A-203ENST00000488758 KIF1BO60333 1816 aa10.76□□□□□ -0.69
APOBEC3A-203ENST00000488758 DISP3Q9P2K9 1392 aa10.76□□□□□ -0.69
APOBEC3A-203ENST00000488758 PREX1Q8TCU6 1659 aa10.76□□□□□ -0.69
APOBEC3A-203ENST00000488758 UGGT1Q9NYU2 1555 aa10.75□□□□□ -0.69
APOBEC3A-203ENST00000488758 CEBPAP49715 358 aaPredicted RBP10.75□□□□□ -0.69
APOBEC3A-203ENST00000488758 MROH2AA6NES4 1674 aa10.75□□□□□ -0.69
APOBEC3A-203ENST00000488758 SPATA31E1Q6ZUB1 1445 aa10.75□□□□□ -0.69
APOBEC3A-203ENST00000488758 SYNMO15061 1565 aa10.73□□□□□ -0.69
APOBEC3A-203ENST00000488758 SPATA31D1Q6ZQQ2 1576 aa10.73□□□□□ -0.69
APOBEC3A-203ENST00000488758 NBPF8Q3BBV2 869 aa10.73□□□□□ -0.69
APOBEC3A-203ENST00000488758 RPGRIP1LQ68CZ1 1315 aa10.73□□□□□ -0.69
APOBEC3A-203ENST00000488758 TNRQ92752 1358 aa10.73□□□□□ -0.69
APOBEC3A-203ENST00000488758 NEURL4Q96JN8 1562 aa10.72□□□□□ -0.69
APOBEC3A-203ENST00000488758 PIK3C2BO00750 1634 aa10.71□□□□□ -0.69
APOBEC3A-203ENST00000488758 SOCS7O14512 581 aa10.71□□□□□ -0.69
APOBEC3A-203ENST00000488758 UHRF1BP1Q6BDS2 1440 aa10.71□□□□□ -0.69
APOBEC3A-203ENST00000488758 C3P01024 1663 aa10.7□□□□□ -0.7
APOBEC3A-203ENST00000488758 ZNF316A6NFI3 1004 aaPredicted RBP10.7□□□□□ -0.7
APOBEC3A-203ENST00000488758 CHRDL2Q6WN34 429 aa10.7□□□□□ -0.7
APOBEC3A-203ENST00000488758 STRCQ7RTU9 1775 aa10.7□□□□□ -0.7
APOBEC3A-203ENST00000488758 ADGRB3O60242 1522 aa10.69□□□□□ -0.7
APOBEC3A-203ENST00000488758 VGFO15240 615 aaPredicted RBP10.69□□□□□ -0.7
APOBEC3A-203ENST00000488758 HDGFP51858 240 aaKnown RBP10.69□□□□□ -0.7
APOBEC3A-203ENST00000488758 PRAG1Q86YV5 1406 aa10.67□□□□□ -0.7
APOBEC3A-203ENST00000488758 ADGRF5Q8IZF2 1346 aa10.67□□□□□ -0.7
APOBEC3A-203ENST00000488758 TMEM131LA2VDJ0 1609 aa10.67□□□□□ -0.7
APOBEC3A-203ENST00000488758 PITPNM1O00562 1244 aa10.67□□□□□ -0.7
APOBEC3A-203ENST00000488758 EIF4G2P78344 907 aaKnown RBP eCLIP10.67□□□□□ -0.7
APOBEC3A-203ENST00000488758 NUTM2DQ5VT03 806 aaPredicted RBP10.67□□□□□ -0.7
APOBEC3A-203ENST00000488758 CARD11Q9BXL7 1154 aa10.67□□□□□ -0.7
APOBEC3A-203ENST00000488758 NLRP1Q9C000 1473 aa10.67□□□□□ -0.7
APOBEC3A-203ENST00000488758 SPDYE4A6NLX3 237 aa10.66□□□□□ -0.7
APOBEC3A-203ENST00000488758 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.66□□□□□ -0.7
APOBEC3A-203ENST00000488758 ROCK2O75116 1388 aaKnown RBP10.65□□□□□ -0.7
APOBEC3A-203ENST00000488758 THEMISQ8N1K5 641 aaPredicted RBP10.65□□□□□ -0.7
APOBEC3A-203ENST00000488758 A2ML1A8K2U0 1454 aa10.65□□□□□ -0.7
APOBEC3A-203ENST00000488758 MYOM2P54296 1465 aa10.65□□□□□ -0.7
APOBEC3A-203ENST00000488758 RALGAPBQ86X10 1494 aa10.64□□□□□ -0.71
APOBEC3A-203ENST00000488758 MYO5BQ9ULV0 1848 aa10.64□□□□□ -0.71
APOBEC3A-203ENST00000488758 HSPA5P11021 654 aaKnown RBP10.64□□□□□ -0.71
APOBEC3A-203ENST00000488758 NBPF1Q3BBV0 1214 aa10.64□□□□□ -0.71
APOBEC3A-203ENST00000488758 PPLO60437 1756 aa10.64□□□□□ -0.71
APOBEC3A-203ENST00000488758 IFT172Q9UG01 1749 aa10.64□□□□□ -0.71
APOBEC3A-203ENST00000488758 CFAP70Q5T0N1 1121 aa10.63□□□□□ -0.71
APOBEC3A-203ENST00000488758 HIRIP3Q9BW71 556 aaPredicted RBP10.63□□□□□ -0.71
APOBEC3A-203ENST00000488758 ZFYVE9O95405 1425 aa10.63□□□□□ -0.71
APOBEC3A-203ENST00000488758 RIMS2Q9UQ26 1411 aa10.63□□□□□ -0.71
APOBEC3A-203ENST00000488758 NEXMIFQ5QGS0 1516 aa10.63□□□□□ -0.71
APOBEC3A-203ENST00000488758 SETD1BQ9UPS6 1966 aaKnown RBP10.63□□□□□ -0.71
APOBEC3A-203ENST00000488758 POTEHQ6S545 545 aa10.62□□□□□ -0.71
APOBEC3A-203ENST00000488758 BCANQ96GW7 911 aa10.62□□□□□ -0.71
APOBEC3A-203ENST00000488758 C14orf93Q9H972 538 aaKnown RBP10.62□□□□□ -0.71
APOBEC3A-203ENST00000488758 EID1Q9Y6B2 187 aa10.62□□□□□ -0.71
APOBEC3A-203ENST00000488758 TRPM1Q7Z4N2 1603 aa10.62□□□□□ -0.71
APOBEC3A-203ENST00000488758 KDM5AP29375 1690 aaKnown RBP10.61□□□□□ -0.71
APOBEC3A-203ENST00000488758 TXNDC2Q86VQ3 553 aa10.61□□□□□ -0.71
APOBEC3A-203ENST00000488758 SPDYE1Q8NFV5 336 aaPredicted RBP10.61□□□□□ -0.71
APOBEC3A-203ENST00000488758 TMEM2Q9UHN6 1383 aa10.61□□□□□ -0.71
APOBEC3A-203ENST00000488758 NRXN1Q9ULB1 1477 aa10.61□□□□□ -0.71
APOBEC3A-203ENST00000488758 UBR1Q8IWV7 1749 aa10.6□□□□□ -0.71
APOBEC3A-203ENST00000488758 USP47Q96K76 1375 aa10.6□□□□□ -0.71
APOBEC3A-203ENST00000488758 PIK3C2GO75747 1445 aa10.59□□□□□ -0.71
APOBEC3A-203ENST00000488758 MYO3AQ8NEV4 1616 aa10.59□□□□□ -0.71
APOBEC3A-203ENST00000488758 KIAA1210Q9ULL0 1709 aa10.59□□□□□ -0.71
APOBEC3A-203ENST00000488758 GPRASP1Q5JY77 1395 aa10.59□□□□□ -0.71
APOBEC3A-203ENST00000488758 CEP170BQ9Y4F5 1589 aaPredicted RBP10.57□□□□□ -0.72
APOBEC3A-203ENST00000488758 ST20-MTHFSA0A0A6YYL1 179 aa10.57□□□□□ -0.72
APOBEC3A-203ENST00000488758 LTKP29376 864 aa10.57□□□□□ -0.72
APOBEC3A-203ENST00000488758 TMEM132EQ6IEE7 984 aa10.57□□□□□ -0.72
APOBEC3A-203ENST00000488758 ANKLE2Q86XL3 938 aa10.57□□□□□ -0.72
APOBEC3A-203ENST00000488758 CLEC11AQ9Y240 323 aa10.57□□□□□ -0.72
APOBEC3A-203ENST00000488758 LAMC1P11047 1609 aa10.56□□□□□ -0.72
APOBEC3A-203ENST00000488758 LTBP4Q8N2S1 1624 aa10.56□□□□□ -0.72
APOBEC3A-203ENST00000488758 SCAF11Q99590 1463 aaKnown RBP10.55□□□□□ -0.72
APOBEC3A-203ENST00000488758 EIF3AQ14152 1382 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms