RNA–Protein interactions for RNA: ENST00000488470.5

TNIK-214, Transcript of TRAF2 and NCK interacting kinase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIK, Length 3,918 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-214ENST00000488470 NAP1L2Q9ULW6 460 aaPredicted RBP13□□□□□ -0.33
TNIK-214ENST00000488470 DUSP27Q5VZP5 1158 aa12.99□□□□□ -0.33
TNIK-214ENST00000488470 RUNDC1Q96C34 613 aa12.99□□□□□ -0.33
TNIK-214ENST00000488470 TNNQ9UQP3 1299 aa12.99□□□□□ -0.33
TNIK-214ENST00000488470 PRDM2Q13029 1718 aa12.99□□□□□ -0.33
TNIK-214ENST00000488470 SLFN5Q08AF3 891 aa12.99□□□□□ -0.33
TNIK-214ENST00000488470 DDX11L8A8MPP1 907 aa12.98□□□□□ -0.33
TNIK-214ENST00000488470 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.98□□□□□ -0.332e-6■■■■□ 22.3
TNIK-214ENST00000488470 SEC24BO95487 1268 aa12.97□□□□□ -0.33
TNIK-214ENST00000488470 MCTP1Q6DN14 999 aa12.97□□□□□ -0.33
TNIK-214ENST00000488470 HDGFL2Q7Z4V5 671 aaPredicted RBP12.97□□□□□ -0.33
TNIK-214ENST00000488470 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.97□□□□□ -0.33
TNIK-214ENST00000488470 RBM10P98175 930 aaKnown RBP12.97□□□□□ -0.33
TNIK-214ENST00000488470 ABCC5O15440 1437 aa12.97□□□□□ -0.33
TNIK-214ENST00000488470 WASHC2CQ9Y4E1 1318 aa12.96□□□□□ -0.33
TNIK-214ENST00000488470 RILPL2Q969X0 211 aa12.96□□□□□ -0.34
TNIK-214ENST00000488470 PTPRGP23470 1445 aa12.96□□□□□ -0.34
TNIK-214ENST00000488470 MIA2Q96PC5 1412 aa12.96□□□□□ -0.34
TNIK-214ENST00000488470 BICRAQ9NZM4 1560 aa12.96□□□□□ -0.34
TNIK-214ENST00000488470 EIF3AQ14152 1382 aaKnown RBP12.96□□□□□ -0.34
TNIK-214ENST00000488470 DDX19BQ9UMR2 479 aa12.95□□□□□ -0.34
TNIK-214ENST00000488470 CHMP3Q9Y3E7 222 aa12.95□□□□□ -0.34
TNIK-214ENST00000488470 RSPH4AQ5TD94 716 aa12.95□□□□□ -0.34
TNIK-214ENST00000488470 PANK2Q9BZ23 570 aa12.95□□□□□ -0.34
TNIK-214ENST00000488470 PTPN23Q9H3S7 1636 aa12.95□□□□□ -0.34
TNIK-214ENST00000488470 WWC1Q8IX03 1113 aa12.95□□□□□ -0.34
TNIK-214ENST00000488470 MCM4P33991 863 aa12.94□□□□□ -0.34
TNIK-214ENST00000488470 FAM43AQ8N2R8 423 aa12.94□□□□□ -0.34
TNIK-214ENST00000488470 SPINK5Q9NQ38 1064 aaPredicted RBP12.94□□□□□ -0.34
TNIK-214ENST00000488470 MAP3K1Q13233 1512 aa12.94□□□□□ -0.34
TNIK-214ENST00000488470 TOPBP1Q92547 1522 aa12.94□□□□□ -0.34
TNIK-214ENST00000488470 DRC7Q8IY82 874 aa12.94□□□□□ -0.34
TNIK-214ENST00000488470 LTV1Q96GA3 475 aaPredicted RBP12.94□□□□□ -0.34
TNIK-214ENST00000488470 TBC1D2Q9BYX2 928 aa12.94□□□□□ -0.34
TNIK-214ENST00000488470 THUMPD2Q9BTF0 503 aaKnown RBP12.94□□□□□ -0.34
TNIK-214ENST00000488470 CHMP4BQ9H444 224 aaKnown RBP12.94□□□□□ -0.34
TNIK-214ENST00000488470 RPRD2Q5VT52 1461 aaKnown RBP12.93□□□□□ -0.34
TNIK-214ENST00000488470 FGD1P98174 961 aa12.93□□□□□ -0.34
TNIK-214ENST00000488470 ZNF428Q96B54 188 aa12.93□□□□□ -0.34
TNIK-214ENST00000488470 NOB1Q9ULX3 412 aaKnown RBP12.93□□□□□ -0.34
TNIK-214ENST00000488470 EPRSP07814 1512 aaKnown RBP12.93□□□□□ -0.34
TNIK-214ENST00000488470 A0A0G2JS52 829 aa12.93□□□□□ -0.34
TNIK-214ENST00000488470 CAVIN1Q6NZI2 390 aaKnown RBP12.93□□□□□ -0.34
TNIK-214ENST00000488470 PDE3AQ14432 1141 aa12.93□□□□□ -0.34
TNIK-214ENST00000488470 R3HCC1Q9Y3T6 440 aaKnown RBP12.93□□□□□ -0.34
TNIK-214ENST00000488470 GOLGA6L4A6NEF3 574 aa12.92□□□□□ -0.34
TNIK-214ENST00000488470 DISP3Q9P2K9 1392 aa12.92□□□□□ -0.34
TNIK-214ENST00000488470 C8orf34Q49A92 452 aa12.92□□□□□ -0.34
TNIK-214ENST00000488470 TERF2IPQ9NYB0 399 aa12.92□□□□□ -0.34
TNIK-214ENST00000488470 C9orf84Q5VXU9 1444 aa12.92□□□□□ -0.34
TNIK-214ENST00000488470 RTF1Q92541 710 aaKnown RBP12.91□□□□□ -0.34
TNIK-214ENST00000488470 MRE11P49959 708 aa12.91□□□□□ -0.34
TNIK-214ENST00000488470 EHBP1L1Q8N3D4 1523 aa12.91□□□□□ -0.34
TNIK-214ENST00000488470 ERBINQ96RT1 1412 aa12.9□□□□□ -0.34
TNIK-214ENST00000488470 DIAPH1O60610 1272 aaKnown RBP12.9□□□□□ -0.34
TNIK-214ENST00000488470 PCDHB15Q9Y5E8 787 aa12.9□□□□□ -0.34
TNIK-214ENST00000488470 DHX29Q7Z478 1369 aaKnown RBP12.9□□□□□ -0.34
TNIK-214ENST00000488470 NASPP49321 788 aaPredicted RBP12.9□□□□□ -0.34
TNIK-214ENST00000488470 MCCP23508 829 aa12.89□□□□□ -0.35
TNIK-214ENST00000488470 KIAA2012Q0VF49 1180 aa12.89□□□□□ -0.35
TNIK-214ENST00000488470 ST18O60284 1047 aa12.89□□□□□ -0.35
TNIK-214ENST00000488470 FBLN1P23142 703 aa12.89□□□□□ -0.35
TNIK-214ENST00000488470 CCDC9Q9Y3X0 531 aaKnown RBP12.89□□□□□ -0.35
TNIK-214ENST00000488470 GRPEL1Q9HAV7 217 aa12.88□□□□□ -0.35
TNIK-214ENST00000488470 EFCAB5A4FU69 1503 aa12.88□□□□□ -0.35
TNIK-214ENST00000488470 RARSP54136 660 aaKnown RBP12.88□□□□□ -0.35
TNIK-214ENST00000488470 PRPF40AO75400 957 aaKnown RBP12.88□□□□□ -0.35
TNIK-214ENST00000488470 DMRT2Q9Y5R5 561 aa12.88□□□□□ -0.35
TNIK-214ENST00000488470 TMEM57Q8N5G2 664 aa12.87□□□□□ -0.35
TNIK-214ENST00000488470 ANO2Q9NQ90 1003 aa12.87□□□□□ -0.35
TNIK-214ENST00000488470 PRKAR2BP31323 418 aa12.87□□□□□ -0.35
TNIK-214ENST00000488470 KIAA1211Q6ZU35 1233 aa12.87□□□□□ -0.35
TNIK-214ENST00000488470 MVPQ14764 893 aaKnown RBP12.86□□□□□ -0.35
TNIK-214ENST00000488470 EVC2Q86UK5 1308 aa12.86□□□□□ -0.35
TNIK-214ENST00000488470 ESPNB1AK53 854 aa12.86□□□□□ -0.35
TNIK-214ENST00000488470 PLEKHH1Q9ULM0 1364 aa12.86□□□□□ -0.35
TNIK-214ENST00000488470 SUPT6HQ7KZ85 1726 aaKnown RBP12.86□□□□□ -0.35
TNIK-214ENST00000488470 RLBP1P12271 317 aa12.86□□□□□ -0.35
TNIK-214ENST00000488470 SSH1Q8WYL5 1049 aa12.86□□□□□ -0.35
TNIK-214ENST00000488470 PLB1Q6P1J6 1458 aa12.85□□□□□ -0.35
TNIK-214ENST00000488470 TROQ12816 1431 aaPredicted RBP12.85□□□□□ -0.35
TNIK-214ENST00000488470 ZRSR1Q15695 479 aaKnown RBP12.85□□□□□ -0.35
TNIK-214ENST00000488470 ATF7IPQ6VMQ6 1270 aa12.84□□□□□ -0.35
TNIK-214ENST00000488470 CHAF1AQ13111 956 aaPredicted RBP12.84□□□□□ -0.35
TNIK-214ENST00000488470 STK31Q9BXU1 1019 aa12.84□□□□□ -0.35
TNIK-214ENST00000488470 PER1O15534 1290 aaPredicted RBP12.83□□□□□ -0.36
TNIK-214ENST00000488470 XRCC6P12956 609 aaKnown RBP eCLIP12.83□□□□□ -0.36
TNIK-214ENST00000488470 SKOR2Q2VWA4 1001 aaPredicted RBP12.83□□□□□ -0.36
TNIK-214ENST00000488470 ARHGEF11O15085 1522 aa12.82□□□□□ -0.36
TNIK-214ENST00000488470 NEK4P51957 841 aa12.82□□□□□ -0.36
TNIK-214ENST00000488470 RBM42Q9BTD8 480 aaKnown RBP12.82□□□□□ -0.36
TNIK-214ENST00000488470 ROCK1Q13464 1354 aa12.82□□□□□ -0.36
TNIK-214ENST00000488470 EIF2S2P20042 333 aaKnown RBP12.82□□□□□ -0.36
TNIK-214ENST00000488470 DCTN1Q14203 1278 aa12.82□□□□□ -0.36
TNIK-214ENST00000488470 HMMRO75330 724 aa12.81□□□□□ -0.36
TNIK-214ENST00000488470 SSFA2P28290 1259 aa12.81□□□□□ -0.36
TNIK-214ENST00000488470 CCDC27Q2M243 656 aa12.81□□□□□ -0.36
TNIK-214ENST00000488470 TESK2Q96S53 571 aa12.81□□□□□ -0.36
TNIK-214ENST00000488470 PKNOX2Q96KN3 472 aa12.8□□□□□ -0.36
TNIK-214ENST00000488470 KIF16BQ96L93 1317 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms