RNA–Protein interactions for RNA: ENST00000488298.5

COL1A2-210, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-210ENST00000488298 TET3O43151 1660 aa18.37■□□□□ 0.53
COL1A2-210ENST00000488298 KCNA6P17658 529 aa18.36■□□□□ 0.53
COL1A2-210ENST00000488298 SLC26A8Q96RN1 970 aa18.36■□□□□ 0.53
COL1A2-210ENST00000488298 SLC52A1Q9NWF4 448 aa18.36■□□□□ 0.53
COL1A2-210ENST00000488298 PROSER2Q86WR7 435 aaPredicted RBP18.34■□□□□ 0.53
COL1A2-210ENST00000488298 NOS1P29475 1434 aa18.33■□□□□ 0.53
COL1A2-210ENST00000488298 TMEM94Q12767 1356 aa18.33■□□□□ 0.53
COL1A2-210ENST00000488298 BCANQ96GW7 911 aa18.33■□□□□ 0.52
COL1A2-210ENST00000488298 HFM1A2PYH4 1435 aa18.32■□□□□ 0.52
COL1A2-210ENST00000488298 E9PCH4 1651 aa18.32■□□□□ 0.52
COL1A2-210ENST00000488298 FAM135BQ49AJ0 1406 aa18.32■□□□□ 0.52
COL1A2-210ENST00000488298 RBM33Q96EV2 1170 aaKnown RBP18.3■□□□□ 0.52
COL1A2-210ENST00000488298 RPRD2Q5VT52 1461 aaKnown RBP18.3■□□□□ 0.52
COL1A2-210ENST00000488298 KDM5AP29375 1690 aaKnown RBP18.3■□□□□ 0.52
COL1A2-210ENST00000488298 XIRP1Q702N8 1843 aaKnown RBP18.28■□□□□ 0.52
COL1A2-210ENST00000488298 HDGFP51858 240 aaKnown RBP18.28■□□□□ 0.52
COL1A2-210ENST00000488298 RGS17Q9UGC6 210 aaPredicted RBP18.27■□□□□ 0.52
COL1A2-210ENST00000488298 ADGRB3O60242 1522 aa18.26■□□□□ 0.51
COL1A2-210ENST00000488298 PPP1R15AO75807 674 aaPredicted RBP18.25■□□□□ 0.51
COL1A2-210ENST00000488298 NUP155O75694 1391 aa18.24■□□□□ 0.51
COL1A2-210ENST00000488298 MSH6P52701 1360 aa18.23■□□□□ 0.51
COL1A2-210ENST00000488298 CHGAP10645 457 aaKnown RBP18.23■□□□□ 0.51
COL1A2-210ENST00000488298 MYO5BQ9ULV0 1848 aa18.21■□□□□ 0.51
COL1A2-210ENST00000488298 NKTRP30414 1462 aaKnown RBP18.21■□□□□ 0.51
COL1A2-210ENST00000488298 PLEKHG1Q9ULL1 1385 aa18.21■□□□□ 0.51
COL1A2-210ENST00000488298 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.21■□□□□ 0.51
COL1A2-210ENST00000488298 SLAIN2Q9P270 581 aa18.21■□□□□ 0.51
COL1A2-210ENST00000488298 RIMS2Q9UQ26 1411 aa18.21■□□□□ 0.51
COL1A2-210ENST00000488298 TBX22Q9Y458 520 aa18.2■□□□□ 0.5
COL1A2-210ENST00000488298 ZFYVE9O95405 1425 aa18.2■□□□□ 0.5
COL1A2-210ENST00000488298 SPHKAPQ2M3C7 1700 aa18.18■□□□□ 0.5
COL1A2-210ENST00000488298 NWD1Q149M9 1564 aa18.18■□□□□ 0.5
COL1A2-210ENST00000488298 ROBO1Q9Y6N7 1651 aa18.18■□□□□ 0.5
COL1A2-210ENST00000488298 TMEM131LA2VDJ0 1609 aa18.17■□□□□ 0.5
COL1A2-210ENST00000488298 POTEAQ6S8J7 498 aa18.17■□□□□ 0.5
COL1A2-210ENST00000488298 NUTM2DQ5VT03 806 aaPredicted RBP18.16■□□□□ 0.5
COL1A2-210ENST00000488298 KCNA4P22459 653 aa18.15■□□□□ 0.5
COL1A2-210ENST00000488298 C14orf37Q86TY3 774 aa18.15■□□□□ 0.5
COL1A2-210ENST00000488298 CNKSR2Q8WXI2 1034 aa18.13■□□□□ 0.49
COL1A2-210ENST00000488298 NCOA3Q9Y6Q9 1424 aa18.13■□□□□ 0.49
COL1A2-210ENST00000488298 JCADQ9P266 1359 aa18.12■□□□□ 0.49
COL1A2-210ENST00000488298 CHD2O14647 1828 aaKnown RBP18.12■□□□□ 0.49
COL1A2-210ENST00000488298 CADPS2Q86UW7 1296 aa18.11■□□□□ 0.49
COL1A2-210ENST00000488298 C19orf44Q9H6X5 657 aa18.11■□□□□ 0.49
COL1A2-210ENST00000488298 SETD5Q9C0A6 1442 aa18.11■□□□□ 0.49
COL1A2-210ENST00000488298 TRPM2O94759 1503 aa18.1■□□□□ 0.49
COL1A2-210ENST00000488298 ADAMTS13Q76LX8 1427 aa18.1■□□□□ 0.49
COL1A2-210ENST00000488298 CLTCL1P53675 1640 aa18.09■□□□□ 0.49
COL1A2-210ENST00000488298 PIK3R4Q99570 1358 aa18.09■□□□□ 0.49
COL1A2-210ENST00000488298 ATF3P18847 181 aa18.09■□□□□ 0.49
COL1A2-210ENST00000488298 NCBP3Q53F19 620 aaKnown RBP18.09■□□□□ 0.49
COL1A2-210ENST00000488298 AMOTL2Q9Y2J4 779 aa18.08■□□□□ 0.48
COL1A2-210ENST00000488298 PHLPP1O60346 1717 aa18.06■□□□□ 0.48
COL1A2-210ENST00000488298 RAB3GAP2Q9H2M9 1393 aa18.05■□□□□ 0.48
COL1A2-210ENST00000488298 DIP2AQ14689 1571 aa18.04■□□□□ 0.48
COL1A2-210ENST00000488298 SPATA31A6Q5VVP1 1343 aa18.03■□□□□ 0.48
COL1A2-210ENST00000488298 KIF1BO60333 1816 aa18.03■□□□□ 0.48
COL1A2-210ENST00000488298 ZNF326Q5BKZ1 582 aaKnown RBP18.03■□□□□ 0.48
COL1A2-210ENST00000488298 MEX3CQ5U5Q3 659 aaKnown RBP18.03■□□□□ 0.48
COL1A2-210ENST00000488298 TRIM52Q96A61 297 aa18.03■□□□□ 0.48
COL1A2-210ENST00000488298 POTEDQ86YR6 584 aa18.02■□□□□ 0.48
COL1A2-210ENST00000488298 SLC4A1APQ9BWU0 796 aaKnown RBP18.02■□□□□ 0.48
COL1A2-210ENST00000488298 PTPRUQ92729 1446 aa18.01■□□□□ 0.47
COL1A2-210ENST00000488298 HRCP23327 699 aa18■□□□□ 0.47
COL1A2-210ENST00000488298 BRINP3Q76B58 766 aa18■□□□□ 0.47
COL1A2-210ENST00000488298 MPHOSPH9Q99550 1183 aa18■□□□□ 0.47
COL1A2-210ENST00000488298 COL16A1Q07092 1604 aaPredicted RBP18■□□□□ 0.47
COL1A2-210ENST00000488298 SIPA1L2Q9P2F8 1722 aaPredicted RBP18■□□□□ 0.47
COL1A2-210ENST00000488298 ZNF772Q68DY9 489 aaPredicted RBP17.99■□□□□ 0.47
COL1A2-210ENST00000488298 ACIN1Q9UKV3 1341 aaKnown RBP17.98■□□□□ 0.47
COL1A2-210ENST00000488298 NEXMIFQ5QGS0 1516 aa17.97■□□□□ 0.47
COL1A2-210ENST00000488298 LRP6O75581 1613 aa17.96■□□□□ 0.47
COL1A2-210ENST00000488298 AHDC1Q5TGY3 1603 aaPredicted RBP17.96■□□□□ 0.47
COL1A2-210ENST00000488298 NRXN3Q9Y4C0 1643 aa17.96■□□□□ 0.47
COL1A2-210ENST00000488298 DCCP43146 1447 aa17.95■□□□□ 0.46
COL1A2-210ENST00000488298 METP08581 1390 aa17.94■□□□□ 0.46
COL1A2-210ENST00000488298 NUTM2BA6NNL0 878 aaPredicted RBP17.94■□□□□ 0.46
COL1A2-210ENST00000488298 NUTM2EB1AL46 878 aaPredicted RBP17.94■□□□□ 0.46
COL1A2-210ENST00000488298 NUTM2AQ8IVF1 878 aaPredicted RBP17.94■□□□□ 0.46
COL1A2-210ENST00000488298 PPLO60437 1756 aa17.94■□□□□ 0.46
COL1A2-210ENST00000488298 SETBP1Q9Y6X0 1596 aa17.93■□□□□ 0.46
COL1A2-210ENST00000488298 IFT172Q9UG01 1749 aa17.92■□□□□ 0.46
COL1A2-210ENST00000488298 SPATA31E1Q6ZUB1 1445 aa17.91■□□□□ 0.46
COL1A2-210ENST00000488298 RXRBP28702 533 aa17.91■□□□□ 0.46
COL1A2-210ENST00000488298 LRRC59Q96AG4 307 aaKnown RBP17.91■□□□□ 0.46
COL1A2-210ENST00000488298 NPM3O75607 178 aaKnown RBP17.9■□□□□ 0.46
COL1A2-210ENST00000488298 SHPRHQ149N8 1683 aa17.9■□□□□ 0.46
COL1A2-210ENST00000488298 MST1RQ04912 1400 aa17.89■□□□□ 0.46
COL1A2-210ENST00000488298 SETD1AO15047 1707 aaKnown RBP17.89■□□□□ 0.46
COL1A2-210ENST00000488298 XRN1Q8IZH2 1706 aaKnown RBP17.89■□□□□ 0.45
COL1A2-210ENST00000488298 ASXL1Q8IXJ9 1541 aa17.88■□□□□ 0.45
COL1A2-210ENST00000488298 ANKRD30BQ9BXX2 1392 aa17.88■□□□□ 0.45
COL1A2-210ENST00000488298 VGFO15240 615 aaPredicted RBP17.87■□□□□ 0.45
COL1A2-210ENST00000488298 DDX17Q92841 729 aaKnown RBP17.87■□□□□ 0.45
COL1A2-210ENST00000488298 UPF1Q92900 1129 aaKnown RBP eCLIP17.87■□□□□ 0.45
COL1A2-210ENST00000488298 AFF2P51816 1311 aa17.86■□□□□ 0.45
COL1A2-210ENST00000488298 CCDC144AA2RUR9 1427 aa17.86■□□□□ 0.45
COL1A2-210ENST00000488298 ADGRL3Q9HAR2 1447 aa17.86■□□□□ 0.45
COL1A2-210ENST00000488298 RPGRIP1LQ68CZ1 1315 aa17.83■□□□□ 0.44
COL1A2-210ENST00000488298 C8orf37Q96NL8 207 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms