RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 MBD3O95983 291 aa10.06□□□□□ -0.8
MCF2L2-212ENST00000488149 MNS1Q8NEH6 495 aa10.06□□□□□ -0.8
MCF2L2-212ENST00000488149 BICD2Q8TD16 824 aa10.06□□□□□ -0.8
MCF2L2-212ENST00000488149 CARMIL2Q6F5E8 1435 aa10.06□□□□□ -0.8
MCF2L2-212ENST00000488149 PES1O00541 588 aaKnown RBP10.06□□□□□ -0.8
MCF2L2-212ENST00000488149 IPO7O95373 1038 aaKnown RBP10.06□□□□□ -0.8
MCF2L2-212ENST00000488149 ROCK1Q13464 1354 aa10.06□□□□□ -0.8
MCF2L2-212ENST00000488149 BACH2Q9BYV9 841 aa10.06□□□□□ -0.8
MCF2L2-212ENST00000488149 FHOD3Q2V2M9 1422 aa10.05□□□□□ -0.8
MCF2L2-212ENST00000488149 BRD4O60885 1362 aaPredicted RBP10.05□□□□□ -0.8
MCF2L2-212ENST00000488149 CEP89Q96ST8 783 aa10.05□□□□□ -0.8
MCF2L2-212ENST00000488149 HSP90B2PQ58FF3 399 aa10.05□□□□□ -0.8
MCF2L2-212ENST00000488149 LETM1O95202 739 aaPredicted RBP10.05□□□□□ -0.8
MCF2L2-212ENST00000488149 API5Q9BZZ5 524 aaKnown RBP10.05□□□□□ -0.8
MCF2L2-212ENST00000488149 CHMP3Q9Y3E7 222 aa10.05□□□□□ -0.8
MCF2L2-212ENST00000488149 TOP2AP11388 1531 aaKnown RBP10.04□□□□□ -0.8
MCF2L2-212ENST00000488149 KIF7Q2M1P5 1343 aa10.04□□□□□ -0.8
MCF2L2-212ENST00000488149 SMC3Q9UQE7 1217 aa10.04□□□□□ -0.8
MCF2L2-212ENST00000488149 GGT6Q6P531 493 aa10.04□□□□□ -0.8
MCF2L2-212ENST00000488149 TAF7LQ5H9L4 462 aa10.03□□□□□ -0.8
MCF2L2-212ENST00000488149 CPLX2Q6PUV4 134 aaKnown RBP10.03□□□□□ -0.8
MCF2L2-212ENST00000488149 HOOK1Q9UJC3 728 aaKnown RBP10.03□□□□□ -0.8
MCF2L2-212ENST00000488149 EFCAB2Q5VUJ9 269 aa10.03□□□□□ -0.8
MCF2L2-212ENST00000488149 CAVIN1Q6NZI2 390 aaKnown RBP10.03□□□□□ -0.8
MCF2L2-212ENST00000488149 ANKRD20A12PQ8NF67 263 aa10.03□□□□□ -0.8
MCF2L2-212ENST00000488149 ELL2O00472 640 aaPredicted RBP10.03□□□□□ -0.8
MCF2L2-212ENST00000488149 LNPKQ9C0E8 428 aa10.03□□□□□ -0.8
MCF2L2-212ENST00000488149 ANO2Q9NQ90 1003 aa10.03□□□□□ -0.8
MCF2L2-212ENST00000488149 WIZO95785 1651 aa10.02□□□□□ -0.81
MCF2L2-212ENST00000488149 RNF20Q5VTR2 975 aa10.02□□□□□ -0.81
MCF2L2-212ENST00000488149 RNF214Q8ND24 703 aa10.02□□□□□ -0.81
MCF2L2-212ENST00000488149 AK7Q96M32 723 aa10.02□□□□□ -0.81
MCF2L2-212ENST00000488149 VPS37CA5D8V6 355 aaPredicted RBP10.02□□□□□ -0.81
MCF2L2-212ENST00000488149 CDC45O75419 566 aa10.02□□□□□ -0.81
MCF2L2-212ENST00000488149 UACAQ9BZF9 1416 aa10.02□□□□□ -0.81
MCF2L2-212ENST00000488149 RBM10P98175 930 aaKnown RBP10.02□□□□□ -0.81
MCF2L2-212ENST00000488149 RUNDC1Q96C34 613 aa10.02□□□□□ -0.81
MCF2L2-212ENST00000488149 GRPEL1Q9HAV7 217 aa10.01□□□□□ -0.81
MCF2L2-212ENST00000488149 CCDC73Q6ZRK6 1079 aa10.01□□□□□ -0.81
MCF2L2-212ENST00000488149 ESPNB1AK53 854 aa10.01□□□□□ -0.81
MCF2L2-212ENST00000488149 NAT10Q9H0A0 1025 aaKnown RBP10.01□□□□□ -0.81
MCF2L2-212ENST00000488149 TSPY26PQ9H489 355 aa10.01□□□□□ -0.81
MCF2L2-212ENST00000488149 LRRFIP1Q32MZ4 808 aaKnown RBP10.01□□□□□ -0.81
MCF2L2-212ENST00000488149 RUFY1Q96T51 708 aa10.01□□□□□ -0.81
MCF2L2-212ENST00000488149 WASHC2AQ641Q2 1341 aa10.01□□□□□ -0.81
MCF2L2-212ENST00000488149 CALRP27797 417 aaKnown RBP10.01□□□□□ -0.81
MCF2L2-212ENST00000488149 SMARCA2P51531 1590 aa10□□□□□ -0.81
MCF2L2-212ENST00000488149 PODXL2Q9NZ53 605 aa10□□□□□ -0.81
MCF2L2-212ENST00000488149 PANK1Q8TE04 598 aa10□□□□□ -0.81
MCF2L2-212ENST00000488149 MCM2P49736 904 aa10□□□□□ -0.81
MCF2L2-212ENST00000488149 CDR1P51861 262 aa10□□□□□ -0.81
MCF2L2-212ENST00000488149 TOMM22Q9NS69 142 aa10□□□□□ -0.81
MCF2L2-212ENST00000488149 AKAP17AQ02040 695 aaKnown RBP9.99□□□□□ -0.81
MCF2L2-212ENST00000488149 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.99□□□□□ -0.81
MCF2L2-212ENST00000488149 HNRNPMP52272 730 aaKnown RBP eCLIP9.99□□□□□ -0.81
MCF2L2-212ENST00000488149 TRIM29Q14134 588 aa9.99□□□□□ -0.81
MCF2L2-212ENST00000488149 TRAK1Q9UPV9 953 aa9.99□□□□□ -0.81
MCF2L2-212ENST00000488149 ERCC4Q92889 916 aaPredicted RBP9.99□□□□□ -0.81
MCF2L2-212ENST00000488149 RABEP1Q15276 862 aa9.98□□□□□ -0.81
MCF2L2-212ENST00000488149 MIA2Q96PC5 1412 aa9.98□□□□□ -0.81
MCF2L2-212ENST00000488149 SYNE3Q6ZMZ3 975 aa9.98□□□□□ -0.81
MCF2L2-212ENST00000488149 TRIM5Q9C035 493 aa9.98□□□□□ -0.81
MCF2L2-212ENST00000488149 KIF3BO15066 747 aa9.98□□□□□ -0.81
MCF2L2-212ENST00000488149 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.98□□□□□ -0.81
MCF2L2-212ENST00000488149 EVC2Q86UK5 1308 aa9.98□□□□□ -0.81
MCF2L2-212ENST00000488149 AKNAQ7Z591 1439 aa9.98□□□□□ -0.81
MCF2L2-212ENST00000488149 AMPHP49418 695 aa9.98□□□□□ -0.81
MCF2L2-212ENST00000488149 PDE3AQ14432 1141 aa9.98□□□□□ -0.81
MCF2L2-212ENST00000488149 CPLX1O14810 134 aa9.98□□□□□ -0.81
MCF2L2-212ENST00000488149 SMG6Q86US8 1419 aaKnown RBP9.97□□□□□ -0.81
MCF2L2-212ENST00000488149 CCP110O43303 1012 aa9.97□□□□□ -0.81
MCF2L2-212ENST00000488149 PRPF40AO75400 957 aaKnown RBP9.97□□□□□ -0.81
MCF2L2-212ENST00000488149 RIPK4P57078 832 aa9.97□□□□□ -0.81
MCF2L2-212ENST00000488149 ZNF330Q9Y3S2 320 aaPredicted RBP9.97□□□□□ -0.81
MCF2L2-212ENST00000488149 UQCRHLA0A096LP55 91 aa9.97□□□□□ -0.81
MCF2L2-212ENST00000488149 UQCRHP07919 91 aa9.97□□□□□ -0.81
MCF2L2-212ENST00000488149 PDE4CQ08493 712 aa9.97□□□□□ -0.81
MCF2L2-212ENST00000488149 PATL2C9JE40 543 aaKnown RBP9.97□□□□□ -0.81
MCF2L2-212ENST00000488149 CWC22Q9HCG8 908 aaKnown RBP9.97□□□□□ -0.81
MCF2L2-212ENST00000488149 TAF3Q5VWG9 929 aa9.97□□□□□ -0.81
MCF2L2-212ENST00000488149 RUSC2Q8N2Y8 1516 aa9.97□□□□□ -0.81
MCF2L2-212ENST00000488149 APPP05067 770 aa9.97□□□□□ -0.81
MCF2L2-212ENST00000488149 H0YHG0 523 aa9.96□□□□□ -0.81
MCF2L2-212ENST00000488149 IFIT2P09913 472 aaKnown RBP9.96□□□□□ -0.81
MCF2L2-212ENST00000488149 CCDC47Q96A33 483 aaKnown RBP9.96□□□□□ -0.81
MCF2L2-212ENST00000488149 MCM4P33991 863 aa9.96□□□□□ -0.81
MCF2L2-212ENST00000488149 LEKR1Q6ZMV7 388 aa9.96□□□□□ -0.81
MCF2L2-212ENST00000488149 PCMTD1Q96MG8 357 aaPredicted RBP9.96□□□□□ -0.81
MCF2L2-212ENST00000488149 CIZ1Q9ULV3 898 aaPredicted RBP9.96□□□□□ -0.81
MCF2L2-212ENST00000488149 DIAPH1O60610 1272 aaKnown RBP9.96□□□□□ -0.82
MCF2L2-212ENST00000488149 MARCH6O60337 910 aa9.96□□□□□ -0.82
MCF2L2-212ENST00000488149 RDXP35241 583 aaKnown RBP9.96□□□□□ -0.82
MCF2L2-212ENST00000488149 DHX8Q14562 1220 aaKnown RBP9.96□□□□□ -0.82
MCF2L2-212ENST00000488149 PDZRN3Q9UPQ7 1066 aa9.96□□□□□ -0.82
MCF2L2-212ENST00000488149 MSH5O43196 834 aa9.95□□□□□ -0.82
MCF2L2-212ENST00000488149 HSP90AB4PQ58FF6 505 aa9.95□□□□□ -0.82
MCF2L2-212ENST00000488149 NINLQ9Y2I6 1382 aa9.95□□□□□ -0.82
MCF2L2-212ENST00000488149 CDCA7LQ96GN5 454 aa9.95□□□□□ -0.82
MCF2L2-212ENST00000488149 ERC2O15083 957 aa9.95□□□□□ -0.82
MCF2L2-212ENST00000488149 CSB-PGBD3P0DP91 1061 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms