RNA–Protein interactions for RNA: ENST00000488068.5

EPHA1-205, Transcript of EPH receptor A1, humanhuman

TSL 1 (best)

Gene EPHA1, Length 2,922 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-205ENST00000488068 PPLO60437 1756 aa20.23■□□□□ 0.83
EPHA1-205ENST00000488068 GGT6Q6P531 493 aa20.23■□□□□ 0.83
EPHA1-205ENST00000488068 EIF3AQ14152 1382 aaKnown RBP20.22■□□□□ 0.83
EPHA1-205ENST00000488068 ARHGAP31Q2M1Z3 1444 aa20.22■□□□□ 0.83
EPHA1-205ENST00000488068 WASHC2CQ9Y4E1 1318 aa20.22■□□□□ 0.83
EPHA1-205ENST00000488068 PIK3C2BO00750 1634 aa20.22■□□□□ 0.83
EPHA1-205ENST00000488068 FKBP8Q14318 412 aa20.21■□□□□ 0.83
EPHA1-205ENST00000488068 FAM9BQ8IZU0 186 aa20.21■□□□□ 0.83
EPHA1-205ENST00000488068 NOS1P29475 1434 aa20.21■□□□□ 0.83
EPHA1-205ENST00000488068 SIGLEC1Q9BZZ2 1709 aa20.21■□□□□ 0.83
EPHA1-205ENST00000488068 CFAP65Q6ZU64 1925 aaKnown RBP20.21■□□□□ 0.83
EPHA1-205ENST00000488068 ZBED9Q6R2W3 1325 aa20.19■□□□□ 0.82
EPHA1-205ENST00000488068 SETBP1Q9Y6X0 1596 aa20.19■□□□□ 0.82
EPHA1-205ENST00000488068 MYBBP1AQ9BQG0 1328 aaKnown RBP20.19■□□□□ 0.82
EPHA1-205ENST00000488068 YEATS2Q9ULM3 1422 aa20.19■□□□□ 0.82
EPHA1-205ENST00000488068 BCL11AQ9H165 835 aa20.19■□□□□ 0.82
EPHA1-205ENST00000488068 BRD4O60885 1362 aaPredicted RBP20.19■□□□□ 0.82
EPHA1-205ENST00000488068 FAM69CQ0P6D2 419 aa20.18■□□□□ 0.82
EPHA1-205ENST00000488068 REREQ9P2R6 1566 aa20.17■□□□□ 0.82
EPHA1-205ENST00000488068 PARD3Q8TEW0 1356 aa20.17■□□□□ 0.82
EPHA1-205ENST00000488068 PER1O15534 1290 aaPredicted RBP20.17■□□□□ 0.82
EPHA1-205ENST00000488068 SLC24A1O60721 1099 aa20.17■□□□□ 0.82
EPHA1-205ENST00000488068 CDCA8Q53HL2 280 aa20.17■□□□□ 0.82
EPHA1-205ENST00000488068 MYO3AQ8NEV4 1616 aa20.17■□□□□ 0.82
EPHA1-205ENST00000488068 SYNMO15061 1565 aa20.16■□□□□ 0.82
EPHA1-205ENST00000488068 RPGRIP1LQ68CZ1 1315 aa20.16■□□□□ 0.82
EPHA1-205ENST00000488068 TSPOAP1O95153 1857 aa20.16■□□□□ 0.82
EPHA1-205ENST00000488068 ADGRF5Q8IZF2 1346 aa20.15■□□□□ 0.82
EPHA1-205ENST00000488068 NEFLP07196 543 aa20.15■□□□□ 0.82
EPHA1-205ENST00000488068 KDM5AP29375 1690 aaKnown RBP20.13■□□□□ 0.81
EPHA1-205ENST00000488068 TMC1Q8TDI8 760 aa20.12■□□□□ 0.81
EPHA1-205ENST00000488068 PIK3C2GO75747 1445 aa20.12■□□□□ 0.81
EPHA1-205ENST00000488068 PNISRQ8TF01 805 aaKnown RBP20.12■□□□□ 0.81
EPHA1-205ENST00000488068 MYOM1P52179 1685 aa20.11■□□□□ 0.81
EPHA1-205ENST00000488068 CFAP70Q5T0N1 1121 aa20.11■□□□□ 0.81
EPHA1-205ENST00000488068 PREX1Q8TCU6 1659 aa20.11■□□□□ 0.81
EPHA1-205ENST00000488068 AGLP35573 1532 aa20.1■□□□□ 0.81
EPHA1-205ENST00000488068 LRPPRCP42704 1394 aaKnown RBP20.1■□□□□ 0.81
EPHA1-205ENST00000488068 PANK3Q9H999 370 aa20.1■□□□□ 0.81
EPHA1-205ENST00000488068 RBM19Q9Y4C8 960 aaKnown RBP20.09■□□□□ 0.81
EPHA1-205ENST00000488068 NLRP13Q86W25 1043 aa20.09■□□□□ 0.81
EPHA1-205ENST00000488068 KIF13AQ9H1H9 1805 aa20.09■□□□□ 0.81
EPHA1-205ENST00000488068 SBNO2Q9Y2G9 1366 aa20.08■□□□□ 0.81
EPHA1-205ENST00000488068 CNGB1Q14028 1251 aaPredicted RBP20.08■□□□□ 0.81
EPHA1-205ENST00000488068 NEXMIFQ5QGS0 1516 aa20.07■□□□□ 0.8
EPHA1-205ENST00000488068 CHGAP10645 457 aaKnown RBP20.07■□□□□ 0.8
EPHA1-205ENST00000488068 ADGRB1O14514 1584 aa20.06■□□□□ 0.8
EPHA1-205ENST00000488068 C14orf93Q9H972 538 aaKnown RBP20.06■□□□□ 0.8
EPHA1-205ENST00000488068 SLC52A1Q9NWF4 448 aa20.05■□□□□ 0.8
EPHA1-205ENST00000488068 PPP6R1Q9UPN7 881 aa20.05■□□□□ 0.8
EPHA1-205ENST00000488068 ERVK-7P63135 1459 aa20.04■□□□□ 0.8
EPHA1-205ENST00000488068 ZFYVE9O95405 1425 aa20.03■□□□□ 0.8
EPHA1-205ENST00000488068 INSRP06213 1382 aa20.03■□□□□ 0.8
EPHA1-205ENST00000488068 TMEM131LA2VDJ0 1609 aa20.01■□□□□ 0.79
EPHA1-205ENST00000488068 QRICH2Q9H0J4 1663 aa20.01■□□□□ 0.79
EPHA1-205ENST00000488068 MYO5BQ9ULV0 1848 aa20.01■□□□□ 0.79
EPHA1-205ENST00000488068 ASXL1Q8IXJ9 1541 aa20.01■□□□□ 0.79
EPHA1-205ENST00000488068 NPC1L1Q9UHC9 1359 aa20.01■□□□□ 0.79
EPHA1-205ENST00000488068 VGFO15240 615 aaPredicted RBP20■□□□□ 0.79
EPHA1-205ENST00000488068 SMG6Q86US8 1419 aaKnown RBP20■□□□□ 0.79
EPHA1-205ENST00000488068 KNSTRNQ9Y448 316 aa19.99■□□□□ 0.79
EPHA1-205ENST00000488068 ARHGEF40Q8TER5 1519 aa19.99■□□□□ 0.79
EPHA1-205ENST00000488068 CC2D1BQ5T0F9 858 aaKnown RBP19.99■□□□□ 0.79
EPHA1-205ENST00000488068 CENPJQ9HC77 1338 aaPredicted RBP19.98■□□□□ 0.79
EPHA1-205ENST00000488068 IDI1Q13907 227 aa19.98■□□□□ 0.79
EPHA1-205ENST00000488068 ERICH6BQ5W0A0 696 aa19.97■□□□□ 0.79
EPHA1-205ENST00000488068 CLTCQ00610 1675 aaKnown RBP19.96■□□□□ 0.79
EPHA1-205ENST00000488068 ARHGEF28Q8N1W1 1705 aaKnown RBP19.96■□□□□ 0.79
EPHA1-205ENST00000488068 AMER1Q5JTC6 1135 aaPredicted RBP19.95■□□□□ 0.78
EPHA1-205ENST00000488068 SPATA31D1Q6ZQQ2 1576 aa19.93■□□□□ 0.78
EPHA1-205ENST00000488068 NUDCQ9Y266 331 aa19.92■□□□□ 0.78
EPHA1-205ENST00000488068 BLMP54132 1417 aaPredicted RBP19.91■□□□□ 0.78
EPHA1-205ENST00000488068 TRAK1Q9UPV9 953 aa19.9■□□□□ 0.78
EPHA1-205ENST00000488068 MSH5O43196 834 aa19.89■□□□□ 0.78
EPHA1-205ENST00000488068 PUS7Q96PZ0 661 aaKnown RBP19.89■□□□□ 0.78
EPHA1-205ENST00000488068 PPP2R1AP30153 589 aa19.87■□□□□ 0.77
EPHA1-205ENST00000488068 TMEM132EQ6IEE7 984 aa19.87■□□□□ 0.77
EPHA1-205ENST00000488068 USP32Q8NFA0 1604 aa19.86■□□□□ 0.77
EPHA1-205ENST00000488068 FBXO31Q5XUX0 539 aaPredicted RBP19.86■□□□□ 0.77
EPHA1-205ENST00000488068 PDE3BQ13370 1112 aa19.84■□□□□ 0.77
EPHA1-205ENST00000488068 NUTM2DQ5VT03 806 aaPredicted RBP19.83■□□□□ 0.76
EPHA1-205ENST00000488068 RNF123Q5XPI4 1314 aa19.83■□□□□ 0.76
EPHA1-205ENST00000488068 TULP4Q9NRJ4 1543 aa19.83■□□□□ 0.76
EPHA1-205ENST00000488068 EVC2Q86UK5 1308 aa19.81■□□□□ 0.76
EPHA1-205ENST00000488068 CARD14Q9BXL6 1004 aa19.81■□□□□ 0.76
EPHA1-205ENST00000488068 ALKQ9UM73 1620 aa19.81■□□□□ 0.76
EPHA1-205ENST00000488068 A2ML1A8K2U0 1454 aa19.81■□□□□ 0.76
EPHA1-205ENST00000488068 FANCIQ9NVI1 1328 aa19.81■□□□□ 0.76
EPHA1-205ENST00000488068 PTPRMP28827 1452 aa19.79■□□□□ 0.76
EPHA1-205ENST00000488068 PPP4R2Q9NY27 417 aa19.78■□□□□ 0.76
EPHA1-205ENST00000488068 YTHDC2Q9H6S0 1430 aaKnown RBP19.77■□□□□ 0.76
EPHA1-205ENST00000488068 IRX6P78412 446 aaPredicted RBP19.77■□□□□ 0.76
EPHA1-205ENST00000488068 STAG3Q9UJ98 1225 aa19.77■□□□□ 0.76
EPHA1-205ENST00000488068 NINLQ9Y2I6 1382 aa19.77■□□□□ 0.75
EPHA1-205ENST00000488068 SETD1AO15047 1707 aaKnown RBP19.76■□□□□ 0.75
EPHA1-205ENST00000488068 NSD3Q9BZ95 1437 aa19.76■□□□□ 0.75
EPHA1-205ENST00000488068 WDR43Q15061 677 aaKnown RBP eCLIP19.76■□□□□ 0.75
EPHA1-205ENST00000488068 DLC1Q96QB1 1528 aa19.75■□□□□ 0.75
EPHA1-205ENST00000488068 RIMS2Q9UQ26 1411 aa19.74■□□□□ 0.75
EPHA1-205ENST00000488068 ADAMTS8Q9UP79 889 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms