RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 UPF1Q92900 1129 aaKnown RBP eCLIP26.03■■□□□ 1.76
TOM1-214ENST00000487670 MSH6P52701 1360 aa26.03■■□□□ 1.76
TOM1-214ENST00000487670 SRCAPQ6ZRS2 3230 aa26.03■■□□□ 1.76
TOM1-214ENST00000487670 NOS1P29475 1434 aa26.02■■□□□ 1.76
TOM1-214ENST00000487670 VPS8Q8N3P4 1428 aa26.01■■□□□ 1.75
TOM1-214ENST00000487670 SLAIN2Q9P270 581 aa26.01■■□□□ 1.75
TOM1-214ENST00000487670 TRIM52Q96A61 297 aa26■■□□□ 1.75
TOM1-214ENST00000487670 AHDC1Q5TGY3 1603 aaPredicted RBP25.99■■□□□ 1.75
TOM1-214ENST00000487670 DIP2AQ14689 1571 aa25.98■■□□□ 1.75
TOM1-214ENST00000487670 ZFYVE9O95405 1425 aa25.97■■□□□ 1.75
TOM1-214ENST00000487670 DAPK1P53355 1430 aa25.97■■□□□ 1.75
TOM1-214ENST00000487670 TMEM131LA2VDJ0 1609 aa25.96■■□□□ 1.75
TOM1-214ENST00000487670 KANK1Q14678 1352 aa25.93■■□□□ 1.74
TOM1-214ENST00000487670 FGD6Q6ZV73 1430 aa25.9■■□□□ 1.74
TOM1-214ENST00000487670 BCANQ96GW7 911 aa25.9■■□□□ 1.74
TOM1-214ENST00000487670 PLEKHG1Q9ULL1 1385 aa25.89■■□□□ 1.74
TOM1-214ENST00000487670 MEX3CQ5U5Q3 659 aaKnown RBP25.88■■□□□ 1.73
TOM1-214ENST00000487670 CHIC2Q9UKJ5 165 aa25.88■■□□□ 1.73
TOM1-214ENST00000487670 RIMS2Q9UQ26 1411 aa25.88■■□□□ 1.73
TOM1-214ENST00000487670 SPATA31A6Q5VVP1 1343 aa25.87■■□□□ 1.73
TOM1-214ENST00000487670 NHSL1Q5SYE7 1610 aa25.85■■□□□ 1.73
TOM1-214ENST00000487670 ADAMTS13Q76LX8 1427 aa25.84■■□□□ 1.73
TOM1-214ENST00000487670 ZNF772Q68DY9 489 aaPredicted RBP25.83■■□□□ 1.73
TOM1-214ENST00000487670 E9PCH4 1651 aa25.83■■□□□ 1.73
TOM1-214ENST00000487670 NUTM2DQ5VT03 806 aaPredicted RBP25.8■■□□□ 1.72
TOM1-214ENST00000487670 CDK12Q9NYV4 1490 aaPredicted RBP25.79■■□□□ 1.72
TOM1-214ENST00000487670 NUTM2BA6NNL0 878 aaPredicted RBP25.79■■□□□ 1.72
TOM1-214ENST00000487670 NUTM2EB1AL46 878 aaPredicted RBP25.79■■□□□ 1.72
TOM1-214ENST00000487670 NUTM2AQ8IVF1 878 aaPredicted RBP25.79■■□□□ 1.72
TOM1-214ENST00000487670 RGS12O14924 1447 aa25.79■■□□□ 1.72
TOM1-214ENST00000487670 ANKRD30AQ9BXX3 1397 aa25.78■■□□□ 1.72
TOM1-214ENST00000487670 PTPRUQ92729 1446 aa25.78■■□□□ 1.72
TOM1-214ENST00000487670 RPRD2Q5VT52 1461 aaKnown RBP25.78■■□□□ 1.72
TOM1-214ENST00000487670 UNC13BO14795 1591 aa25.78■■□□□ 1.72
TOM1-214ENST00000487670 NRXN3Q9Y4C0 1643 aa25.77■■□□□ 1.72
TOM1-214ENST00000487670 RXRBP28702 533 aa25.77■■□□□ 1.72
TOM1-214ENST00000487670 C14orf37Q86TY3 774 aa25.77■■□□□ 1.72
TOM1-214ENST00000487670 SLC52A1Q9NWF4 448 aa25.77■■□□□ 1.72
TOM1-214ENST00000487670 ASXL1Q8IXJ9 1541 aa25.77■■□□□ 1.72
TOM1-214ENST00000487670 XRN1Q8IZH2 1706 aaKnown RBP25.77■■□□□ 1.72
TOM1-214ENST00000487670 PPP1R15AO75807 674 aaPredicted RBP25.76■■□□□ 1.71
TOM1-214ENST00000487670 AFF2P51816 1311 aa25.76■■□□□ 1.71
TOM1-214ENST00000487670 NCOA3Q9Y6Q9 1424 aa25.76■■□□□ 1.71
TOM1-214ENST00000487670 ADGRL2O95490 1459 aa25.76■■□□□ 1.71
TOM1-214ENST00000487670 LOC105371045A0A1W2PR82 267 aa25.75■■□□□ 1.71
TOM1-214ENST00000487670 BRINP3Q76B58 766 aa25.75■■□□□ 1.71
TOM1-214ENST00000487670 EP400Q96L91 3159 aa25.74■■□□□ 1.71
TOM1-214ENST00000487670 TBX22Q9Y458 520 aa25.73■■□□□ 1.71
TOM1-214ENST00000487670 NALCNQ8IZF0 1738 aa25.72■■□□□ 1.71
TOM1-214ENST00000487670 TRPM2O94759 1503 aa25.72■■□□□ 1.71
TOM1-214ENST00000487670 CADPS2Q86UW7 1296 aa25.7■■□□□ 1.7
TOM1-214ENST00000487670 C19orf44Q9H6X5 657 aa25.69■■□□□ 1.7
TOM1-214ENST00000487670 ATF3P18847 181 aa25.68■■□□□ 1.7
TOM1-214ENST00000487670 CHGAP10645 457 aaKnown RBP25.67■■□□□ 1.7
TOM1-214ENST00000487670 MST1RQ04912 1400 aa25.67■■□□□ 1.7
TOM1-214ENST00000487670 DDX17Q92841 729 aaKnown RBP25.67■■□□□ 1.7
TOM1-214ENST00000487670 SETD5Q9C0A6 1442 aa25.67■■□□□ 1.7
TOM1-214ENST00000487670 ANKRD50Q9ULJ7 1429 aa25.65■■□□□ 1.7
TOM1-214ENST00000487670 IQGAP3Q86VI3 1631 aa25.63■■□□□ 1.69
TOM1-214ENST00000487670 PIK3R4Q99570 1358 aa25.62■■□□□ 1.69
TOM1-214ENST00000487670 AMOTL2Q9Y2J4 779 aa25.62■■□□□ 1.69
TOM1-214ENST00000487670 PNPLA6Q8IY17 1366 aa25.61■■□□□ 1.69
TOM1-214ENST00000487670 C8orf37Q96NL8 207 aa25.61■■□□□ 1.69
TOM1-214ENST00000487670 DCCP43146 1447 aa25.61■■□□□ 1.69
TOM1-214ENST00000487670 SETBP1Q9Y6X0 1596 aa25.6■■□□□ 1.69
TOM1-214ENST00000487670 QTRT2Q9H974 415 aaKnown RBP25.58■■□□□ 1.69
TOM1-214ENST00000487670 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.57■■□□□ 1.68
TOM1-214ENST00000487670 SPHKAPQ2M3C7 1700 aa25.57■■□□□ 1.68
TOM1-214ENST00000487670 LAMC1P11047 1609 aa25.55■■□□□ 1.68
TOM1-214ENST00000487670 HDGFP51858 240 aaKnown RBP25.55■■□□□ 1.68
TOM1-214ENST00000487670 RBM6P78332 1123 aaKnown RBP25.54■■□□□ 1.68
TOM1-214ENST00000487670 MARF1Q9Y4F3 1742 aaKnown RBP25.51■■□□□ 1.68
TOM1-214ENST00000487670 METP08581 1390 aa25.51■■□□□ 1.67
TOM1-214ENST00000487670 ADAMTS2O95450 1211 aa25.5■■□□□ 1.67
TOM1-214ENST00000487670 FAM50AQ14320 339 aaKnown RBP25.5■■□□□ 1.67
TOM1-214ENST00000487670 ADGRL3Q9HAR2 1447 aa25.5■■□□□ 1.67
TOM1-214ENST00000487670 LRRC59Q96AG4 307 aaKnown RBP25.47■■□□□ 1.67
TOM1-214ENST00000487670 COL22A1Q8NFW1 1626 aaPredicted RBP25.45■■□□□ 1.67
TOM1-214ENST00000487670 ATAD2Q6PL18 1390 aa25.44■■□□□ 1.66
TOM1-214ENST00000487670 CLTCL1P53675 1640 aa25.44■■□□□ 1.66
TOM1-214ENST00000487670 BRWD3Q6RI45 1802 aa25.44■■□□□ 1.66
TOM1-214ENST00000487670 NEXMIFQ5QGS0 1516 aa25.43■■□□□ 1.66
TOM1-214ENST00000487670 C1orf167Q5SNV9 1468 aa25.43■■□□□ 1.66
TOM1-214ENST00000487670 NGLY1Q96IV0 654 aa25.43■■□□□ 1.66
TOM1-214ENST00000487670 APLP2Q06481 763 aa25.41■■□□□ 1.66
TOM1-214ENST00000487670 ATRNO75882 1429 aa25.4■■□□□ 1.66
TOM1-214ENST00000487670 KIF1BO60333 1816 aa25.38■■□□□ 1.65
TOM1-214ENST00000487670 USP21Q9UK80 565 aa25.37■■□□□ 1.65
TOM1-214ENST00000487670 ORAI2Q96SN7 254 aa25.35■■□□□ 1.65
TOM1-214ENST00000487670 NUP155O75694 1391 aa25.33■■□□□ 1.65
TOM1-214ENST00000487670 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.33■■□□□ 1.65
TOM1-214ENST00000487670 SOS2Q07890 1332 aaPredicted RBP25.33■■□□□ 1.64
TOM1-214ENST00000487670 ZRANB1Q9UGI0 708 aa25.32■■□□□ 1.64
TOM1-214ENST00000487670 MYOM2P54296 1465 aa25.32■■□□□ 1.64
TOM1-214ENST00000487670 PTCH1Q13635 1447 aa25.31■■□□□ 1.64
TOM1-214ENST00000487670 TRPC5Q9UL62 973 aaPredicted RBP25.31■■□□□ 1.64
TOM1-214ENST00000487670 BCL9LQ86UU0 1499 aa25.31■■□□□ 1.64
TOM1-214ENST00000487670 GLI3P10071 1580 aa25.31■■□□□ 1.64
TOM1-214ENST00000487670 ZNF326Q5BKZ1 582 aaKnown RBP25.3■■□□□ 1.64
TOM1-214ENST00000487670 FNBP4Q8N3X1 1017 aaPredicted RBP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms