RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 ERCC6L2Q5T890 1561 aa10.89□□□□□ -0.67
RTFDC1-209ENST00000487211 CADPSQ9ULU8 1353 aa10.89□□□□□ -0.67
RTFDC1-209ENST00000487211 ERBB3P21860 1342 aa10.87□□□□□ -0.67
RTFDC1-209ENST00000487211 TRIM6-TRIM34B2RNG4 842 aa10.87□□□□□ -0.67
RTFDC1-209ENST00000487211 C14orf37Q86TY3 774 aa10.87□□□□□ -0.67
RTFDC1-209ENST00000487211 NUDT18Q6ZVK8 323 aa10.86□□□□□ -0.67
RTFDC1-209ENST00000487211 PACS2Q86VP3 889 aa10.86□□□□□ -0.67
RTFDC1-209ENST00000487211 FAM217BQ9NTX9 383 aaPredicted RBP10.86□□□□□ -0.67
RTFDC1-209ENST00000487211 PNMA3Q9UL41 463 aa10.86□□□□□ -0.67
RTFDC1-209ENST00000487211 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.85□□□□□ -0.67
RTFDC1-209ENST00000487211 NBPF26B4DH59 902 aa10.85□□□□□ -0.67
RTFDC1-209ENST00000487211 PROX2Q3B8N5 592 aa10.85□□□□□ -0.67
RTFDC1-209ENST00000487211 VARS2Q5ST30 1063 aaKnown RBP10.85□□□□□ -0.67
RTFDC1-209ENST00000487211 EYA1Q99502 592 aa10.85□□□□□ -0.67
RTFDC1-209ENST00000487211 RCCD1A6NED2 376 aa10.84□□□□□ -0.67
RTFDC1-209ENST00000487211 ST18O60284 1047 aa10.84□□□□□ -0.67
RTFDC1-209ENST00000487211 BEGAINQ9BUH8 593 aa10.84□□□□□ -0.67
RTFDC1-209ENST00000487211 C3orf80F5H4A9 247 aa10.83□□□□□ -0.68
RTFDC1-209ENST00000487211 PSEN2P49810 448 aa10.83□□□□□ -0.68
RTFDC1-209ENST00000487211 TATDN2Q93075 761 aa10.83□□□□□ -0.68
RTFDC1-209ENST00000487211 EMP3P54852 163 aa10.82□□□□□ -0.68
RTFDC1-209ENST00000487211 HECW2Q9P2P5 1572 aa10.82□□□□□ -0.68
RTFDC1-209ENST00000487211 CFTRP13569 1480 aa10.81□□□□□ -0.68
RTFDC1-209ENST00000487211 SMAPO00193 183 aa10.81□□□□□ -0.68
RTFDC1-209ENST00000487211 ONECUT3O60422 494 aaPredicted RBP10.81□□□□□ -0.68
RTFDC1-209ENST00000487211 MARVELD3Q96A59 401 aa10.81□□□□□ -0.68
RTFDC1-209ENST00000487211 ZBED2Q9BTP6 218 aa10.81□□□□□ -0.68
RTFDC1-209ENST00000487211 GOPCQ9HD26 462 aa10.81□□□□□ -0.68
RTFDC1-209ENST00000487211 LAMC3Q9Y6N6 1575 aa10.81□□□□□ -0.68
RTFDC1-209ENST00000487211 ARHGAP33O14559 1287 aa10.8□□□□□ -0.68
RTFDC1-209ENST00000487211 DNAJB2P25686 324 aa10.8□□□□□ -0.68
RTFDC1-209ENST00000487211 PDS5BQ9NTI5 1447 aa10.79□□□□□ -0.68
RTFDC1-209ENST00000487211 PCMTD1Q96MG8 357 aaPredicted RBP10.79□□□□□ -0.68
RTFDC1-209ENST00000487211 KIAA1468Q9P260 1216 aa10.79□□□□□ -0.68
RTFDC1-209ENST00000487211 WDR62O43379 1518 aa10.79□□□□□ -0.68
RTFDC1-209ENST00000487211 SH3D19Q5HYK7 790 aa10.78□□□□□ -0.68
RTFDC1-209ENST00000487211 RSPH6AQ9H0K4 717 aa10.78□□□□□ -0.68
RTFDC1-209ENST00000487211 AXIN2Q9Y2T1 843 aa10.78□□□□□ -0.68
RTFDC1-209ENST00000487211 FAM205CA6NFA0 338 aa10.77□□□□□ -0.69
RTFDC1-209ENST00000487211 POTEEQ6S8J3 1075 aa10.77□□□□□ -0.69
RTFDC1-209ENST00000487211 FAM163AQ96GL9 167 aaPredicted RBP10.77□□□□□ -0.69
RTFDC1-209ENST00000487211 DMRTA1Q5VZB9 504 aa10.75□□□□□ -0.69
RTFDC1-209ENST00000487211 TMEM134Q9H6X4 195 aa10.75□□□□□ -0.69
RTFDC1-209ENST00000487211 ATP1B4Q9UN42 357 aaPredicted RBP10.75□□□□□ -0.69
RTFDC1-209ENST00000487211 DDX11L8A8MPP1 907 aa10.74□□□□□ -0.69
RTFDC1-209ENST00000487211 PBX2P40425 430 aa10.74□□□□□ -0.69
RTFDC1-209ENST00000487211 SKIV2LQ15477 1246 aaKnown RBP10.74□□□□□ -0.69
RTFDC1-209ENST00000487211 SULF1Q8IWU6 871 aa10.74□□□□□ -0.69
RTFDC1-209ENST00000487211 DISP3Q9P2K9 1392 aa10.74□□□□□ -0.69
RTFDC1-209ENST00000487211 ZNF687Q8N1G0 1237 aa10.73□□□□□ -0.69
RTFDC1-209ENST00000487211 SLC4A5Q9BY07 1137 aa10.73□□□□□ -0.69
RTFDC1-209ENST00000487211 POLR3EQ9NVU0 708 aa10.73□□□□□ -0.69
RTFDC1-209ENST00000487211 RABGEF1Q9UJ41 708 aa10.73□□□□□ -0.69
RTFDC1-209ENST00000487211 FANCD2Q9BXW9 1451 aa10.73□□□□□ -0.69
RTFDC1-209ENST00000487211 CD46P15529 392 aa10.72□□□□□ -0.69
RTFDC1-209ENST00000487211 TBC1D2Q9BYX2 928 aa10.72□□□□□ -0.69
RTFDC1-209ENST00000487211 SEPT9Q9UHD8 586 aaPredicted RBP10.72□□□□□ -0.69
RTFDC1-209ENST00000487211 MYSM1Q5VVJ2 828 aa10.71□□□□□ -0.69
RTFDC1-209ENST00000487211 DIXDC1Q155Q3 683 aa10.7□□□□□ -0.7
RTFDC1-209ENST00000487211 PROCA1Q8NCQ7 364 aaPredicted RBP10.7□□□□□ -0.7
RTFDC1-209ENST00000487211 HS3ST6Q96QI5 342 aa10.7□□□□□ -0.7
RTFDC1-209ENST00000487211 MRC2Q9UBG0 1479 aa10.69□□□□□ -0.7
RTFDC1-209ENST00000487211 RDH13Q8NBN7 331 aa10.69□□□□□ -0.7
RTFDC1-209ENST00000487211 VPS9D1Q9Y2B5 631 aa10.69□□□□□ -0.7
RTFDC1-209ENST00000487211 NUTM1Q86Y26 1132 aa10.68□□□□□ -0.7
RTFDC1-209ENST00000487211 SPIRE2Q8WWL2 714 aa10.68□□□□□ -0.7
RTFDC1-209ENST00000487211 POTEB3A0JP26 581 aa10.67□□□□□ -0.7
RTFDC1-209ENST00000487211 CLK2P49760 499 aaKnown RBP10.67□□□□□ -0.7
RTFDC1-209ENST00000487211 SWT1Q5T5J6 900 aaKnown RBP10.67□□□□□ -0.7
RTFDC1-209ENST00000487211 POTEBQ6S5H4 581 aa10.67□□□□□ -0.7
RTFDC1-209ENST00000487211 CEP164Q9UPV0 1460 aa10.67□□□□□ -0.7
RTFDC1-209ENST00000487211 HDGFP51858 240 aaKnown RBP10.66□□□□□ -0.7
RTFDC1-209ENST00000487211 FAM98CQ17RN3 349 aaKnown RBP10.65□□□□□ -0.7
RTFDC1-209ENST00000487211 RSPH4AQ5TD94 716 aa10.65□□□□□ -0.7
RTFDC1-209ENST00000487211 FLIIQ13045 1269 aa10.63□□□□□ -0.71
RTFDC1-209ENST00000487211 RIC3Q7Z5B4 369 aa10.63□□□□□ -0.71
RTFDC1-209ENST00000487211 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.63□□□□□ -0.71
RTFDC1-209ENST00000487211 NBPF3Q9H094 633 aa10.63□□□□□ -0.71
RTFDC1-209ENST00000487211 URB2Q14146 1524 aaKnown RBP10.63□□□□□ -0.71
RTFDC1-209ENST00000487211 LIMD1Q9UGP4 676 aa10.62□□□□□ -0.71
RTFDC1-209ENST00000487211 TK2O00142 265 aa10.61□□□□□ -0.71
RTFDC1-209ENST00000487211 SLC4A3P48751 1232 aa10.61□□□□□ -0.71
RTFDC1-209ENST00000487211 LCE2DQ5TA82 110 aaPredicted RBP10.61□□□□□ -0.71
RTFDC1-209ENST00000487211 LAPTM4BQ86VI4 370 aa10.61□□□□□ -0.71
RTFDC1-209ENST00000487211 MOXD2PA6NHM9 499 aa10.6□□□□□ -0.71
RTFDC1-209ENST00000487211 KDM4AO75164 1064 aa10.6□□□□□ -0.71
RTFDC1-209ENST00000487211 SLC10A3P09131 477 aa10.6□□□□□ -0.71
RTFDC1-209ENST00000487211 GCGRP47871 477 aa10.6□□□□□ -0.71
RTFDC1-209ENST00000487211 SAMD7Q7Z3H4 446 aa10.6□□□□□ -0.71
RTFDC1-209ENST00000487211 ZMYND15Q9H091 742 aa10.6□□□□□ -0.71
RTFDC1-209ENST00000487211 SYNJ2O15056 1496 aa10.6□□□□□ -0.71
RTFDC1-209ENST00000487211 BHMG1C9JSJ3 638 aaPredicted RBP10.59□□□□□ -0.71
RTFDC1-209ENST00000487211 SPTLC1O15269 473 aa10.59□□□□□ -0.71
RTFDC1-209ENST00000487211 NDUFV2P19404 249 aa10.59□□□□□ -0.71
RTFDC1-209ENST00000487211 LSM11P83369 360 aaKnown RBP eCLIP10.59□□□□□ -0.71
RTFDC1-209ENST00000487211 CSPP1Q1MSJ5 1256 aa10.59□□□□□ -0.71
RTFDC1-209ENST00000487211 RSBN1LQ6PCB5 846 aaPredicted RBP10.59□□□□□ -0.71
RTFDC1-209ENST00000487211 SLF2Q8IX21 1173 aa10.59□□□□□ -0.71
RTFDC1-209ENST00000487211 SPATA31D1Q6ZQQ2 1576 aa10.58□□□□□ -0.72
RTFDC1-209ENST00000487211 RNF40O75150 1001 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms