RNA–Protein interactions for RNA: ENST00000487065.5

STAG1-208, Transcript of stromal antigen 1, human

TSL 1 (best)

Gene STAG1, Length 2,914 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STAG1-208	ENST00000487065	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	11.42	□□□□□ -0.58
STAG1-208	ENST00000487065	MSH6	P52701	1360 aa		11.41	□□□□□ -0.58
STAG1-208	ENST00000487065	EID1	Q9Y6B2	187 aa		11.4	□□□□□ -0.58
STAG1-208	ENST00000487065	MARF1	Q9Y4F3	1742 aa	Known RBP	11.4	□□□□□ -0.58
STAG1-208	ENST00000487065	PTCH1	Q13635	1447 aa		11.4	□□□□□ -0.59
STAG1-208	ENST00000487065	TRIM26	Q12899	539 aa	Predicted RBP	11.39	□□□□□ -0.59
STAG1-208	ENST00000487065	PLPPR3	Q6T4P5	718 aa		11.39	□□□□□ -0.59
STAG1-208	ENST00000487065	KANK1	Q14678	1352 aa		11.39	□□□□□ -0.59
STAG1-208	ENST00000487065	LRP6	O75581	1613 aa		11.38	□□□□□ -0.59
STAG1-208	ENST00000487065	GGT6	Q6P531	493 aa		11.38	□□□□□ -0.59
STAG1-208	ENST00000487065	POTEA	Q6S8J7	498 aa		11.37	□□□□□ -0.59
STAG1-208	ENST00000487065	TMEM94	Q12767	1356 aa		11.37	□□□□□ -0.59
STAG1-208	ENST00000487065	CCDC125	Q86Z20	511 aa		11.37	□□□□□ -0.59
STAG1-208	ENST00000487065	SLC52A1	Q9NWF4	448 aa		11.37	□□□□□ -0.59
STAG1-208	ENST00000487065	HDGF	P51858	240 aa	Known RBP	11.36	□□□□□ -0.59
STAG1-208	ENST00000487065	PIP4K2B	P78356	416 aa		11.36	□□□□□ -0.59
STAG1-208	ENST00000487065	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
STAG1-208	ENST00000487065	KIF3B	O15066	747 aa		11.36	□□□□□ -0.59
STAG1-208	ENST00000487065	TBX22	Q9Y458	520 aa		11.35	□□□□□ -0.59
STAG1-208	ENST00000487065	ASXL1	Q8IXJ9	1541 aa		11.34	□□□□□ -0.59
STAG1-208	ENST00000487065	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.33	□□□□□ -0.6
STAG1-208	ENST00000487065	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
STAG1-208	ENST00000487065	TSPY4	P0CV99	314 aa		11.33	□□□□□ -0.6
STAG1-208	ENST00000487065	TSPY10	P0CW01	314 aa		11.33	□□□□□ -0.6
STAG1-208	ENST00000487065	HRC	P23327	699 aa		11.33	□□□□□ -0.6
STAG1-208	ENST00000487065	ATAD2	Q6PL18	1390 aa		11.31	□□□□□ -0.6
STAG1-208	ENST00000487065	NRXN3	Q9Y4C0	1643 aa		11.3	□□□□□ -0.6
STAG1-208	ENST00000487065	TXNDC2	Q86VQ3	553 aa		11.3	□□□□□ -0.6
STAG1-208	ENST00000487065	ADAMTS13	Q76LX8	1427 aa		11.29	□□□□□ -0.6
STAG1-208	ENST00000487065	ATRN	O75882	1429 aa		11.29	□□□□□ -0.6
STAG1-208	ENST00000487065	LTK	P29376	864 aa		11.29	□□□□□ -0.6
STAG1-208	ENST00000487065	MYO5B	Q9ULV0	1848 aa		11.28	□□□□□ -0.6
STAG1-208	ENST00000487065	CADPS2	Q86UW7	1296 aa		11.28	□□□□□ -0.6
STAG1-208	ENST00000487065	NWD2	Q9ULI1	1742 aa		11.28	□□□□□ -0.6
STAG1-208	ENST00000487065	ABCC5	O15440	1437 aa		11.28	□□□□□ -0.6
STAG1-208	ENST00000487065	DAPK1	P53355	1430 aa		11.27	□□□□□ -0.61
STAG1-208	ENST00000487065	RGS12	O14924	1447 aa		11.27	□□□□□ -0.61
STAG1-208	ENST00000487065	RIMS2	Q9UQ26	1411 aa		11.27	□□□□□ -0.61
STAG1-208	ENST00000487065	SCAF1	Q9H7N4	1312 aa	Known RBP	11.27	□□□□□ -0.61
STAG1-208	ENST00000487065	KIF15	Q9NS87	1388 aa		11.26	□□□□□ -0.61
STAG1-208	ENST00000487065	KIF1A	Q12756	1690 aa		11.26	□□□□□ -0.61
STAG1-208	ENST00000487065	KNDC1	Q76NI1	1749 aa		11.26	□□□□□ -0.61
STAG1-208	ENST00000487065	APLP2	Q06481	763 aa		11.26	□□□□□ -0.61
STAG1-208	ENST00000487065	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.26	□□□□□ -0.61
STAG1-208	ENST00000487065	NALCN	Q8IZF0	1738 aa		11.26	□□□□□ -0.61
STAG1-208	ENST00000487065	MST1R	Q04912	1400 aa		11.26	□□□□□ -0.61
STAG1-208	ENST00000487065	SLAIN2	Q9P270	581 aa		11.25	□□□□□ -0.61
STAG1-208	ENST00000487065	ANKRD30A	Q9BXX3	1397 aa		11.25	□□□□□ -0.61
STAG1-208	ENST00000487065	NEXMIF	Q5QGS0	1516 aa		11.25	□□□□□ -0.61
STAG1-208	ENST00000487065	CDC42BPG	Q6DT37	1551 aa		11.25	□□□□□ -0.61
STAG1-208	ENST00000487065	CLSPN	Q9HAW4	1339 aa		11.25	□□□□□ -0.61
STAG1-208	ENST00000487065	ADGRL3	Q9HAR2	1447 aa		11.24	□□□□□ -0.61
STAG1-208	ENST00000487065		E9PCH4	1651 aa		11.24	□□□□□ -0.61
STAG1-208	ENST00000487065	RXRB	P28702	533 aa		11.24	□□□□□ -0.61
STAG1-208	ENST00000487065	ROCK1	Q13464	1354 aa		11.23	□□□□□ -0.61
STAG1-208	ENST00000487065	RBM6	P78332	1123 aa	Known RBP	11.23	□□□□□ -0.61
STAG1-208	ENST00000487065	PNPLA6	Q8IY17	1366 aa		11.22	□□□□□ -0.61
STAG1-208	ENST00000487065	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.22	□□□□□ -0.61
STAG1-208	ENST00000487065	PROSER2	Q86WR7	435 aa	Predicted RBP	11.22	□□□□□ -0.61
STAG1-208	ENST00000487065	C19orf44	Q9H6X5	657 aa		11.22	□□□□□ -0.61
STAG1-208	ENST00000487065	ZNF644	Q9H582	1327 aa	Predicted RBP	11.22	□□□□□ -0.61
STAG1-208	ENST00000487065	RGPD1	P0DJD0	1748 aa		11.22	□□□□□ -0.61
STAG1-208	ENST00000487065	MYOM2	P54296	1465 aa		11.2	□□□□□ -0.62
STAG1-208	ENST00000487065	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.19	□□□□□ -0.62
STAG1-208	ENST00000487065	RGPD4	Q7Z3J3	1758 aa		11.19	□□□□□ -0.62
STAG1-208	ENST00000487065	DISP2	A7MBM2	1401 aa		11.19	□□□□□ -0.62
STAG1-208	ENST00000487065	NGLY1	Q96IV0	654 aa		11.19	□□□□□ -0.62
STAG1-208	ENST00000487065	LRRC59	Q96AG4	307 aa	Known RBP	11.16	□□□□□ -0.62
STAG1-208	ENST00000487065	BLM	P54132	1417 aa	Predicted RBP	11.16	□□□□□ -0.62
STAG1-208	ENST00000487065	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.15	□□□□□ -0.62
STAG1-208	ENST00000487065	HFM1	A2PYH4	1435 aa		11.15	□□□□□ -0.62
STAG1-208	ENST00000487065	IDI1	Q13907	227 aa		11.15	□□□□□ -0.63
STAG1-208	ENST00000487065	RALGAPB	Q86X10	1494 aa		11.14	□□□□□ -0.63
STAG1-208	ENST00000487065	SOS2	Q07890	1332 aa	Predicted RBP	11.14	□□□□□ -0.63
STAG1-208	ENST00000487065	PTPRU	Q92729	1446 aa		11.13	□□□□□ -0.63
STAG1-208	ENST00000487065	ABCA3	Q99758	1704 aa		11.13	□□□□□ -0.63
STAG1-208	ENST00000487065	ADGRB2	O60241	1585 aa		11.13	□□□□□ -0.63
STAG1-208	ENST00000487065	TECPR2	O15040	1411 aa		11.13	□□□□□ -0.63
STAG1-208	ENST00000487065	ZEB1	P37275	1124 aa	Predicted RBP	11.13	□□□□□ -0.63
STAG1-208	ENST00000487065	KIF1B	O60333	1816 aa		11.12	□□□□□ -0.63
STAG1-208	ENST00000487065	AFF2	P51816	1311 aa		11.12	□□□□□ -0.63
STAG1-208	ENST00000487065	SLIT2	O94813	1529 aa		11.12	□□□□□ -0.63
STAG1-208	ENST00000487065	C1orf167	Q5SNV9	1468 aa		11.12	□□□□□ -0.63
STAG1-208	ENST00000487065	BRINP3	Q76B58	766 aa		11.12	□□□□□ -0.63
STAG1-208	ENST00000487065	NRAP	Q86VF7	1730 aa		11.12	□□□□□ -0.63
STAG1-208	ENST00000487065	RREB1	Q92766	1687 aa		11.12	□□□□□ -0.63
STAG1-208	ENST00000487065	ZRANB1	Q9UGI0	708 aa		11.12	□□□□□ -0.63
STAG1-208	ENST00000487065	BCL9L	Q86UU0	1499 aa		11.11	□□□□□ -0.63
STAG1-208	ENST00000487065	PXDN	Q92626	1479 aa		11.11	□□□□□ -0.63
STAG1-208	ENST00000487065	KANK4	Q5T7N3	995 aa	Predicted RBP	11.11	□□□□□ -0.63
STAG1-208	ENST00000487065	FMN2	Q9NZ56	1722 aa		11.11	□□□□□ -0.63
STAG1-208	ENST00000487065	ATF3	P18847	181 aa		11.11	□□□□□ -0.63
STAG1-208	ENST00000487065	TRPC5	Q9UL62	973 aa	Predicted RBP	11.11	□□□□□ -0.63
STAG1-208	ENST00000487065	PARD3	Q8TEW0	1356 aa		11.1	□□□□□ -0.63
STAG1-208	ENST00000487065	PPP1R15A	O75807	674 aa	Predicted RBP	11.1	□□□□□ -0.63
STAG1-208	ENST00000487065	MEX3C	Q5U5Q3	659 aa	Known RBP	11.1	□□□□□ -0.63
STAG1-208	ENST00000487065	CFAP65	Q6ZU64	1925 aa	Known RBP	11.1	□□□□□ -0.63
STAG1-208	ENST00000487065	USP32	Q8NFA0	1604 aa		11.09	□□□□□ -0.63
STAG1-208	ENST00000487065	LRPPRC	P42704	1394 aa	Known RBP	11.09	□□□□□ -0.63
STAG1-208	ENST00000487065	PPL	O60437	1756 aa		11.09	□□□□□ -0.63

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