RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 SIGLEC1Q9BZZ2 1709 aa9.89□□□□□ -0.83
SF3A3-206ENST00000487062 IFT172Q9UG01 1749 aa9.89□□□□□ -0.83
SF3A3-206ENST00000487062 CLTCQ00610 1675 aaKnown RBP9.89□□□□□ -0.83
SF3A3-206ENST00000487062 NOS1P29475 1434 aa9.89□□□□□ -0.83
SF3A3-206ENST00000487062 MROH2AA6NES4 1674 aa9.88□□□□□ -0.83
SF3A3-206ENST00000487062 PIK3C2BO00750 1634 aa9.88□□□□□ -0.83
SF3A3-206ENST00000487062 MADDQ8WXG6 1647 aa9.88□□□□□ -0.83
SF3A3-206ENST00000487062 UGGT1Q9NYU2 1555 aa9.88□□□□□ -0.83
SF3A3-206ENST00000487062 ROCK2O75116 1388 aaKnown RBP9.88□□□□□ -0.83
SF3A3-206ENST00000487062 KIAA1210Q9ULL0 1709 aa9.87□□□□□ -0.83
SF3A3-206ENST00000487062 ADGRB3O60242 1522 aa9.87□□□□□ -0.83
SF3A3-206ENST00000487062 CARD11Q9BXL7 1154 aa9.87□□□□□ -0.83
SF3A3-206ENST00000487062 ESF1Q9H501 851 aaKnown RBP9.87□□□□□ -0.83
SF3A3-206ENST00000487062 USP47Q96K76 1375 aa9.87□□□□□ -0.83
SF3A3-206ENST00000487062 MYOM2P54296 1465 aa9.86□□□□□ -0.83
SF3A3-206ENST00000487062 SYNMO15061 1565 aa9.86□□□□□ -0.83
SF3A3-206ENST00000487062 SLC52A1Q9NWF4 448 aa9.86□□□□□ -0.83
SF3A3-206ENST00000487062 PPLO60437 1756 aa9.86□□□□□ -0.83
SF3A3-206ENST00000487062 CHGAP10645 457 aaKnown RBP9.85□□□□□ -0.83
SF3A3-206ENST00000487062 DDX10Q13206 875 aaKnown RBP9.85□□□□□ -0.83
SF3A3-206ENST00000487062 GPRASP1Q5JY77 1395 aa9.85□□□□□ -0.83
SF3A3-206ENST00000487062 RPGRIP1LQ68CZ1 1315 aa9.84□□□□□ -0.83
SF3A3-206ENST00000487062 ARID4BQ4LE39 1312 aaPredicted RBP9.83□□□□□ -0.84
SF3A3-206ENST00000487062 MLECQ14165 292 aa9.83□□□□□ -0.84
SF3A3-206ENST00000487062 MIER1Q8N108 512 aa9.83□□□□□ -0.84
SF3A3-206ENST00000487062 ERVK-7P63135 1459 aa9.83□□□□□ -0.84
SF3A3-206ENST00000487062 CCDC7Q96M83 1385 aa9.82□□□□□ -0.84
SF3A3-206ENST00000487062 SPATA31D1Q6ZQQ2 1576 aa9.82□□□□□ -0.84
SF3A3-206ENST00000487062 MYO5BQ9ULV0 1848 aa9.82□□□□□ -0.84
SF3A3-206ENST00000487062 IQGAP1P46940 1657 aa9.81□□□□□ -0.84
SF3A3-206ENST00000487062 WASHC2AQ641Q2 1341 aa9.81□□□□□ -0.84
SF3A3-206ENST00000487062 NRXN1Q9ULB1 1477 aa9.8□□□□□ -0.84
SF3A3-206ENST00000487062 NBPF1Q3BBV0 1214 aa9.8□□□□□ -0.84
SF3A3-206ENST00000487062 TMEM131LA2VDJ0 1609 aa9.8□□□□□ -0.84
SF3A3-206ENST00000487062 ST20-MTHFSA0A0A6YYL1 179 aa9.79□□□□□ -0.84
SF3A3-206ENST00000487062 VGFO15240 615 aaPredicted RBP9.79□□□□□ -0.84
SF3A3-206ENST00000487062 ANP32CO43423 234 aa9.79□□□□□ -0.84
SF3A3-206ENST00000487062 IDI1Q13907 227 aa9.79□□□□□ -0.84
SF3A3-206ENST00000487062 SETBP1Q9Y6X0 1596 aa9.79□□□□□ -0.84
SF3A3-206ENST00000487062 FER1L4A9Z1Z3 1794 aa9.78□□□□□ -0.84
SF3A3-206ENST00000487062 EIF3AQ14152 1382 aaKnown RBP9.78□□□□□ -0.84
SF3A3-206ENST00000487062 NEXMIFQ5QGS0 1516 aa9.78□□□□□ -0.84
SF3A3-206ENST00000487062 FBXO31Q5XUX0 539 aaPredicted RBP9.78□□□□□ -0.84
SF3A3-206ENST00000487062 STAG3Q9UJ98 1225 aa9.78□□□□□ -0.84
SF3A3-206ENST00000487062 KIF7Q2M1P5 1343 aa9.78□□□□□ -0.84
SF3A3-206ENST00000487062 SCAF11Q99590 1463 aaKnown RBP9.78□□□□□ -0.84
SF3A3-206ENST00000487062 ZMYM3Q14202 1370 aa9.77□□□□□ -0.84
SF3A3-206ENST00000487062 ZFYVE9O95405 1425 aa9.77□□□□□ -0.85
SF3A3-206ENST00000487062 ADGRF5Q8IZF2 1346 aa9.77□□□□□ -0.85
SF3A3-206ENST00000487062 KDM5AP29375 1690 aaKnown RBP9.77□□□□□ -0.85
SF3A3-206ENST00000487062 PIK3C2GO75747 1445 aa9.76□□□□□ -0.85
SF3A3-206ENST00000487062 C11orf95C9JLR9 678 aaPredicted RBP9.76□□□□□ -0.85
SF3A3-206ENST00000487062 TNRQ92752 1358 aa9.75□□□□□ -0.85
SF3A3-206ENST00000487062 C3P01024 1663 aa9.74□□□□□ -0.85
SF3A3-206ENST00000487062 TMF1P82094 1093 aa9.74□□□□□ -0.85
SF3A3-206ENST00000487062 CFAP70Q5T0N1 1121 aa9.74□□□□□ -0.85
SF3A3-206ENST00000487062 SAMD1Q6SPF0 538 aaPredicted RBP9.74□□□□□ -0.85
SF3A3-206ENST00000487062 POLR3GLQ9BT43 218 aa9.74□□□□□ -0.85
SF3A3-206ENST00000487062 C14orf93Q9H972 538 aaKnown RBP9.74□□□□□ -0.85
SF3A3-206ENST00000487062 FBXO3Q9UK99 471 aa9.74□□□□□ -0.85
SF3A3-206ENST00000487062 MYO3AQ8NEV4 1616 aa9.74□□□□□ -0.85
SF3A3-206ENST00000487062 CDCA8Q53HL2 280 aa9.73□□□□□ -0.85
SF3A3-206ENST00000487062 A2ML1A8K2U0 1454 aa9.72□□□□□ -0.85
SF3A3-206ENST00000487062 CCER2I3L3R5 266 aa9.72□□□□□ -0.85
SF3A3-206ENST00000487062 HDGFP51858 240 aaKnown RBP9.72□□□□□ -0.85
SF3A3-206ENST00000487062 NLRP1Q9C000 1473 aa9.72□□□□□ -0.85
SF3A3-206ENST00000487062 UBR1Q8IWV7 1749 aa9.71□□□□□ -0.85
SF3A3-206ENST00000487062 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.71□□□□□ -0.86
SF3A3-206ENST00000487062 TESK2Q96S53 571 aa9.71□□□□□ -0.86
SF3A3-206ENST00000487062 RIMS2Q9UQ26 1411 aa9.71□□□□□ -0.86
SF3A3-206ENST00000487062 ADGRB1O14514 1584 aa9.71□□□□□ -0.86
SF3A3-206ENST00000487062 CENPBP07199 599 aaPredicted RBP9.7□□□□□ -0.86
SF3A3-206ENST00000487062 BCANQ96GW7 911 aa9.7□□□□□ -0.86
SF3A3-206ENST00000487062 QRICH2Q9H0J4 1663 aa9.7□□□□□ -0.86
SF3A3-206ENST00000487062 NUTM2DQ5VT03 806 aaPredicted RBP9.69□□□□□ -0.86
SF3A3-206ENST00000487062 RIMS1Q86UR5 1692 aaKnown RBP9.69□□□□□ -0.86
SF3A3-206ENST00000487062 ARHGEF28Q8N1W1 1705 aaKnown RBP9.69□□□□□ -0.86
SF3A3-206ENST00000487062 PROM2Q8N271 834 aa9.69□□□□□ -0.86
SF3A3-206ENST00000487062 SBNO2Q9Y2G9 1366 aa9.69□□□□□ -0.86
SF3A3-206ENST00000487062 DISP3Q9P2K9 1392 aa9.68□□□□□ -0.86
SF3A3-206ENST00000487062 CENPJQ9HC77 1338 aaPredicted RBP9.68□□□□□ -0.86
SF3A3-206ENST00000487062 HAP1P54257 671 aaPredicted RBP9.68□□□□□ -0.86
SF3A3-206ENST00000487062 ADAMTSL3P82987 1691 aa9.67□□□□□ -0.86
SF3A3-206ENST00000487062 ALKQ9UM73 1620 aa9.67□□□□□ -0.86
SF3A3-206ENST00000487062 U3KPZ7 1027 aaPredicted RBP9.67□□□□□ -0.86
SF3A3-206ENST00000487062 CEBPAP49715 358 aaPredicted RBP9.66□□□□□ -0.86
SF3A3-206ENST00000487062 TMEM132EQ6IEE7 984 aa9.66□□□□□ -0.86
SF3A3-206ENST00000487062 YTHDC1Q96MU7 727 aaKnown RBP9.66□□□□□ -0.86
SF3A3-206ENST00000487062 TRAK1Q9UPV9 953 aa9.66□□□□□ -0.86
SF3A3-206ENST00000487062 SETD1AO15047 1707 aaKnown RBP9.65□□□□□ -0.86
SF3A3-206ENST00000487062 KTN1Q86UP2 1357 aaKnown RBP9.65□□□□□ -0.86
SF3A3-206ENST00000487062 PRKCSHP14314 528 aaPredicted RBP9.65□□□□□ -0.86
SF3A3-206ENST00000487062 PRKRIP1Q9H875 184 aaPredicted RBP9.65□□□□□ -0.86
SF3A3-206ENST00000487062 ASXL1Q8IXJ9 1541 aa9.65□□□□□ -0.86
SF3A3-206ENST00000487062 TMEM2Q9UHN6 1383 aa9.64□□□□□ -0.87
SF3A3-206ENST00000487062 VASPP50552 380 aaPredicted RBP9.64□□□□□ -0.87
SF3A3-206ENST00000487062 TAOK2Q9UL54 1235 aa9.64□□□□□ -0.87
SF3A3-206ENST00000487062 MYOM1P52179 1685 aa9.64□□□□□ -0.87
SF3A3-206ENST00000487062 YTHDC2Q9H6S0 1430 aaKnown RBP9.64□□□□□ -0.87
SF3A3-206ENST00000487062 NRXN3Q9Y4C0 1643 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms