RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 VPS8Q8N3P4 1428 aa12.13□□□□□ -0.47
PDPN-205ENST00000487038 LRP6O75581 1613 aa12.13□□□□□ -0.47
PDPN-205ENST00000487038 BCANQ96GW7 911 aa12.13□□□□□ -0.47
PDPN-205ENST00000487038 SLC26A8Q96RN1 970 aa12.13□□□□□ -0.47
PDPN-205ENST00000487038 DIP2AQ14689 1571 aa12.13□□□□□ -0.47
PDPN-205ENST00000487038 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.12□□□□□ -0.47
PDPN-205ENST00000487038 SLAIN2Q9P270 581 aa12.12□□□□□ -0.47
PDPN-205ENST00000487038 NCOA3Q9Y6Q9 1424 aa12.11□□□□□ -0.47
PDPN-205ENST00000487038 CDK12Q9NYV4 1490 aaPredicted RBP12.11□□□□□ -0.47
PDPN-205ENST00000487038 UPF1Q92900 1129 aaKnown RBP eCLIP12.11□□□□□ -0.47
PDPN-205ENST00000487038 RBM33Q96EV2 1170 aaKnown RBP12.11□□□□□ -0.47
PDPN-205ENST00000487038 NOS1P29475 1434 aa12.11□□□□□ -0.47
PDPN-205ENST00000487038 RPRD2Q5VT52 1461 aaKnown RBP12.1□□□□□ -0.47
PDPN-205ENST00000487038 IDI1Q13907 227 aa12.1□□□□□ -0.47
PDPN-205ENST00000487038 DAPK1P53355 1430 aa12.1□□□□□ -0.47
PDPN-205ENST00000487038 PLEKHG1Q9ULL1 1385 aa12.09□□□□□ -0.47
PDPN-205ENST00000487038 TMEM131LA2VDJ0 1609 aa12.09□□□□□ -0.47
PDPN-205ENST00000487038 TRIM52Q96A61 297 aa12.09□□□□□ -0.47
PDPN-205ENST00000487038 ABCC5O15440 1437 aa12.09□□□□□ -0.47
PDPN-205ENST00000487038 HDGFP51858 240 aaKnown RBP12.08□□□□□ -0.48
PDPN-205ENST00000487038 RRP7BPQ9NSQ0 103 aa12.08□□□□□ -0.48
PDPN-205ENST00000487038 SLC52A1Q9NWF4 448 aa12.08□□□□□ -0.48
PDPN-205ENST00000487038 ZFYVE9O95405 1425 aa12.08□□□□□ -0.48
PDPN-205ENST00000487038 NHSL1Q5SYE7 1610 aa12.08□□□□□ -0.48
PDPN-205ENST00000487038 ANKRD30AQ9BXX3 1397 aa12.07□□□□□ -0.48
PDPN-205ENST00000487038 PPP1R15AO75807 674 aaPredicted RBP12.07□□□□□ -0.48
PDPN-205ENST00000487038 C14orf37Q86TY3 774 aa12.07□□□□□ -0.48
PDPN-205ENST00000487038 TRPM2O94759 1503 aa12.06□□□□□ -0.48
PDPN-205ENST00000487038 RXRBP28702 533 aa12.06□□□□□ -0.48
PDPN-205ENST00000487038 RIMS2Q9UQ26 1411 aa12.05□□□□□ -0.48
PDPN-205ENST00000487038 CADPS2Q86UW7 1296 aa12.05□□□□□ -0.48
PDPN-205ENST00000487038 ATF3P18847 181 aa12.04□□□□□ -0.48
PDPN-205ENST00000487038 PIK3R4Q99570 1358 aa12.04□□□□□ -0.48
PDPN-205ENST00000487038 DCCP43146 1447 aa12.03□□□□□ -0.48
PDPN-205ENST00000487038 ADGRL2O95490 1459 aa12.02□□□□□ -0.48
PDPN-205ENST00000487038 ASXL1Q8IXJ9 1541 aa12.02□□□□□ -0.48
PDPN-205ENST00000487038 UNC13BO14795 1591 aa12.02□□□□□ -0.49
PDPN-205ENST00000487038 KANK4Q5T7N3 995 aaPredicted RBP12.02□□□□□ -0.49
PDPN-205ENST00000487038 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.02□□□□□ -0.49
PDPN-205ENST00000487038 E9PCH4 1651 aa12.02□□□□□ -0.49
PDPN-205ENST00000487038 XRN1Q8IZH2 1706 aaKnown RBP12.01□□□□□ -0.49
PDPN-205ENST00000487038 C19orf44Q9H6X5 657 aa12.01□□□□□ -0.49
PDPN-205ENST00000487038 TBX22Q9Y458 520 aa12.01□□□□□ -0.49
PDPN-205ENST00000487038 IQGAP3Q86VI3 1631 aa12□□□□□ -0.49
PDPN-205ENST00000487038 FOXD1Q16676 465 aa12□□□□□ -0.49
PDPN-205ENST00000487038 AFF2P51816 1311 aa12□□□□□ -0.49
PDPN-205ENST00000487038 RGS12O14924 1447 aa12□□□□□ -0.49
PDPN-205ENST00000487038 NUTM2BA6NNL0 878 aaPredicted RBP11.99□□□□□ -0.49
PDPN-205ENST00000487038 NUTM2EB1AL46 878 aaPredicted RBP11.99□□□□□ -0.49
PDPN-205ENST00000487038 NUTM2AQ8IVF1 878 aaPredicted RBP11.99□□□□□ -0.49
PDPN-205ENST00000487038 ADAMTS13Q76LX8 1427 aa11.99□□□□□ -0.49
PDPN-205ENST00000487038 SETD5Q9C0A6 1442 aa11.99□□□□□ -0.49
PDPN-205ENST00000487038 NALCNQ8IZF0 1738 aa11.98□□□□□ -0.49
PDPN-205ENST00000487038 CHIC2Q9UKJ5 165 aa11.98□□□□□ -0.49
PDPN-205ENST00000487038 ANKRD50Q9ULJ7 1429 aa11.97□□□□□ -0.49
PDPN-205ENST00000487038 APLP2Q06481 763 aa11.97□□□□□ -0.49
PDPN-205ENST00000487038 BRINP3Q76B58 766 aa11.97□□□□□ -0.49
PDPN-205ENST00000487038 NRXN3Q9Y4C0 1643 aa11.97□□□□□ -0.49
PDPN-205ENST00000487038 ATAD2Q6PL18 1390 aa11.96□□□□□ -0.49
PDPN-205ENST00000487038 RBM6P78332 1123 aaKnown RBP11.96□□□□□ -0.49
PDPN-205ENST00000487038 EP400Q96L91 3159 aa11.95□□□□□ -0.5
PDPN-205ENST00000487038 SPHKAPQ2M3C7 1700 aa11.95□□□□□ -0.5
PDPN-205ENST00000487038 MARF1Q9Y4F3 1742 aaKnown RBP11.95□□□□□ -0.5
PDPN-205ENST00000487038 CHGAP10645 457 aaKnown RBP11.95□□□□□ -0.5
PDPN-205ENST00000487038 NUTM2DQ5VT03 806 aaPredicted RBP11.95□□□□□ -0.5
PDPN-205ENST00000487038 LRRC59Q96AG4 307 aaKnown RBP11.95□□□□□ -0.5
PDPN-205ENST00000487038 LAMC1P11047 1609 aa11.95□□□□□ -0.5
PDPN-205ENST00000487038 SETBP1Q9Y6X0 1596 aa11.95□□□□□ -0.5
PDPN-205ENST00000487038 MST1RQ04912 1400 aa11.94□□□□□ -0.5
PDPN-205ENST00000487038 NGLY1Q96IV0 654 aa11.94□□□□□ -0.5
PDPN-205ENST00000487038 C8orf37Q96NL8 207 aa11.94□□□□□ -0.5
PDPN-205ENST00000487038 PNPLA6Q8IY17 1366 aa11.92□□□□□ -0.5
PDPN-205ENST00000487038 QTRT2Q9H974 415 aaKnown RBP11.92□□□□□ -0.5
PDPN-205ENST00000487038 AMOTL2Q9Y2J4 779 aa11.92□□□□□ -0.5
PDPN-205ENST00000487038 PTPRUQ92729 1446 aa11.92□□□□□ -0.5
PDPN-205ENST00000487038 COL22A1Q8NFW1 1626 aaPredicted RBP11.91□□□□□ -0.5
PDPN-205ENST00000487038 ADGRL3Q9HAR2 1447 aa11.91□□□□□ -0.5
PDPN-205ENST00000487038 ZRANB1Q9UGI0 708 aa11.9□□□□□ -0.5
PDPN-205ENST00000487038 KIF1BO60333 1816 aa11.9□□□□□ -0.5
PDPN-205ENST00000487038 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.89□□□□□ -0.51
PDPN-205ENST00000487038 PTCH1Q13635 1447 aa11.88□□□□□ -0.51
PDPN-205ENST00000487038 FAM50AQ14320 339 aaKnown RBP11.86□□□□□ -0.51
PDPN-205ENST00000487038 TRPC5Q9UL62 973 aaPredicted RBP11.86□□□□□ -0.51
PDPN-205ENST00000487038 ADAMTS2O95450 1211 aa11.85□□□□□ -0.51
PDPN-205ENST00000487038 CCDC125Q86Z20 511 aa11.85□□□□□ -0.51
PDPN-205ENST00000487038 USP21Q9UK80 565 aa11.85□□□□□ -0.51
PDPN-205ENST00000487038 C1orf167Q5SNV9 1468 aa11.84□□□□□ -0.51
PDPN-205ENST00000487038 LRP5O75197 1615 aa11.84□□□□□ -0.51
PDPN-205ENST00000487038 NEXMIFQ5QGS0 1516 aa11.84□□□□□ -0.51
PDPN-205ENST00000487038 ATRNO75882 1429 aa11.84□□□□□ -0.51
PDPN-205ENST00000487038 ZNF326Q5BKZ1 582 aaKnown RBP11.82□□□□□ -0.52
PDPN-205ENST00000487038 DDX17Q92841 729 aaKnown RBP11.82□□□□□ -0.52
PDPN-205ENST00000487038 CLTCL1P53675 1640 aa11.82□□□□□ -0.52
PDPN-205ENST00000487038 METP08581 1390 aa11.81□□□□□ -0.52
PDPN-205ENST00000487038 ROCK1Q13464 1354 aa11.81□□□□□ -0.52
PDPN-205ENST00000487038 SOS2Q07890 1332 aaPredicted RBP11.81□□□□□ -0.52
PDPN-205ENST00000487038 BRWD3Q6RI45 1802 aa11.81□□□□□ -0.52
PDPN-205ENST00000487038 NUP155O75694 1391 aa11.8□□□□□ -0.52
PDPN-205ENST00000487038 CDC42BPGQ6DT37 1551 aa11.8□□□□□ -0.52
PDPN-205ENST00000487038 FNBP4Q8N3X1 1017 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms