RNA–Protein interactions for RNA: ENST00000486855.1

PHTF1-211, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 3

Gene PHTF1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-211ENST00000486855 GRIN2AQ12879 1464 aa9.88□□□□□ -0.83
PHTF1-211ENST00000486855 DPYSL4O14531 572 aa9.88□□□□□ -0.83
PHTF1-211ENST00000486855 NYAP1Q6ZVC0 841 aa9.88□□□□□ -0.83
PHTF1-211ENST00000486855 EPAS1Q99814 870 aa9.87□□□□□ -0.83
PHTF1-211ENST00000486855 RUSC2Q8N2Y8 1516 aa9.87□□□□□ -0.83
PHTF1-211ENST00000486855 NUP160Q12769 1436 aa9.86□□□□□ -0.83
PHTF1-211ENST00000486855 FAM98CQ17RN3 349 aaKnown RBP9.86□□□□□ -0.83
PHTF1-211ENST00000486855 KCNC4Q03721 635 aa9.85□□□□□ -0.83
PHTF1-211ENST00000486855 RBM33Q96EV2 1170 aaKnown RBP9.84□□□□□ -0.83
PHTF1-211ENST00000486855 TSKSQ9UJT2 592 aa9.84□□□□□ -0.83
PHTF1-211ENST00000486855 CUL7Q14999 1698 aa9.83□□□□□ -0.84
PHTF1-211ENST00000486855 Q6ZNB5 142 aa9.83□□□□□ -0.84
PHTF1-211ENST00000486855 TSR3Q9UJK0 312 aaKnown RBP9.83□□□□□ -0.84
PHTF1-211ENST00000486855 HPS5Q9UPZ3 1129 aa9.83□□□□□ -0.84
PHTF1-211ENST00000486855 TSR1Q2NL82 804 aaKnown RBP9.82□□□□□ -0.84
PHTF1-211ENST00000486855 DDX12PQ92771 950 aa9.82□□□□□ -0.84
PHTF1-211ENST00000486855 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.82□□□□□ -0.84
PHTF1-211ENST00000486855 KIF13AQ9H1H9 1805 aa9.82□□□□□ -0.84
PHTF1-211ENST00000486855 FHAD1B1AJZ9 1412 aa9.82□□□□□ -0.84
PHTF1-211ENST00000486855 C3orf80F5H4A9 247 aa9.8□□□□□ -0.84
PHTF1-211ENST00000486855 EN1Q05925 392 aaPredicted RBP9.8□□□□□ -0.84
PHTF1-211ENST00000486855 CHMP7Q8WUX9 453 aaPredicted RBP9.8□□□□□ -0.84
PHTF1-211ENST00000486855 LRCH3Q96II8 777 aa9.8□□□□□ -0.84
PHTF1-211ENST00000486855 PRIM1P49642 420 aaKnown RBP9.79□□□□□ -0.84
PHTF1-211ENST00000486855 FAM198AQ9UFP1 575 aa9.79□□□□□ -0.84
PHTF1-211ENST00000486855 CYB5RLQ6IPT4 315 aa9.78□□□□□ -0.84
PHTF1-211ENST00000486855 TJAP1Q5JTD0 557 aa9.77□□□□□ -0.85
PHTF1-211ENST00000486855 PDIA6Q15084 440 aa9.76□□□□□ -0.85
PHTF1-211ENST00000486855 NBR1Q14596 966 aa9.75□□□□□ -0.85
PHTF1-211ENST00000486855 SMAPO00193 183 aa9.74□□□□□ -0.85
PHTF1-211ENST00000486855 ADCY10Q96PN6 1610 aa9.72□□□□□ -0.85
PHTF1-211ENST00000486855 CTTNBP2Q8WZ74 1663 aa9.72□□□□□ -0.85
PHTF1-211ENST00000486855 SAMD7Q7Z3H4 446 aa9.72□□□□□ -0.85
PHTF1-211ENST00000486855 MAP3K7O43318 606 aa9.71□□□□□ -0.86
PHTF1-211ENST00000486855 PACS2Q86VP3 889 aa9.71□□□□□ -0.86
PHTF1-211ENST00000486855 CDCA7LQ96GN5 454 aa9.71□□□□□ -0.86
PHTF1-211ENST00000486855 IGF1RP08069 1367 aa9.71□□□□□ -0.86
PHTF1-211ENST00000486855 PPP4CP60510 307 aa9.7□□□□□ -0.86
PHTF1-211ENST00000486855 KIF27Q86VH2 1401 aa9.7□□□□□ -0.86
PHTF1-211ENST00000486855 GFRA3O60609 400 aa9.69□□□□□ -0.86
PHTF1-211ENST00000486855 LAPTM4AQ15012 233 aa9.69□□□□□ -0.86
PHTF1-211ENST00000486855 MTRQ99707 1265 aa9.69□□□□□ -0.86
PHTF1-211ENST00000486855 PRSS12P56730 875 aa9.68□□□□□ -0.86
PHTF1-211ENST00000486855 AMER1Q5JTC6 1135 aaPredicted RBP9.68□□□□□ -0.86
PHTF1-211ENST00000486855 PRKD2Q9BZL6 878 aa9.68□□□□□ -0.86
PHTF1-211ENST00000486855 KIAA0586Q9BVV6 1533 aa9.67□□□□□ -0.86
PHTF1-211ENST00000486855 PRG4Q92954 1404 aaPredicted RBP9.67□□□□□ -0.86
PHTF1-211ENST00000486855 PPP1R18Q6NYC8 613 aa9.67□□□□□ -0.86
PHTF1-211ENST00000486855 TRAF7Q6Q0C0 670 aa9.67□□□□□ -0.86
PHTF1-211ENST00000486855 ZNF516Q92618 1163 aa9.67□□□□□ -0.86
PHTF1-211ENST00000486855 CDHR5Q9HBB8 845 aa9.66□□□□□ -0.86
PHTF1-211ENST00000486855 IQGAP2Q13576 1575 aa9.66□□□□□ -0.86
PHTF1-211ENST00000486855 TATDN2Q93075 761 aa9.65□□□□□ -0.86
PHTF1-211ENST00000486855 NRG2O14511 850 aaPredicted RBP9.64□□□□□ -0.87
PHTF1-211ENST00000486855 APLP1P51693 650 aa9.64□□□□□ -0.87
PHTF1-211ENST00000486855 IL21Q9HBE4 155 aa9.64□□□□□ -0.87
PHTF1-211ENST00000486855 MAPKBP1O60336 1514 aa9.64□□□□□ -0.87
PHTF1-211ENST00000486855 DIP2BQ9P265 1576 aa9.63□□□□□ -0.87
PHTF1-211ENST00000486855 SPDYE16A6NNV3 312 aaPredicted RBP9.63□□□□□ -0.87
PHTF1-211ENST00000486855 PNMA3Q9UL41 463 aa9.63□□□□□ -0.87
PHTF1-211ENST00000486855 TSPOAP1O95153 1857 aa9.62□□□□□ -0.87
PHTF1-211ENST00000486855 PPRC1Q5VV67 1664 aaKnown RBP9.62□□□□□ -0.87
PHTF1-211ENST00000486855 NKX2-3Q8TAU0 364 aa9.62□□□□□ -0.87
PHTF1-211ENST00000486855 KIAA0556O60303 1618 aa9.61□□□□□ -0.87
PHTF1-211ENST00000486855 ARIH1Q9Y4X5 557 aaPredicted RBP9.61□□□□□ -0.87
PHTF1-211ENST00000486855 V9GY48 417 aaPredicted RBP9.61□□□□□ -0.87
PHTF1-211ENST00000486855 CARMIL1Q5VZK9 1371 aa9.61□□□□□ -0.87
PHTF1-211ENST00000486855 DISP1Q96F81 1524 aa9.61□□□□□ -0.87
PHTF1-211ENST00000486855 NBPF26B4DH59 902 aa9.6□□□□□ -0.87
PHTF1-211ENST00000486855 OSBPP22059 807 aa9.6□□□□□ -0.87
PHTF1-211ENST00000486855 CERKQ8TCT0 537 aa9.6□□□□□ -0.87
PHTF1-211ENST00000486855 UGGT2Q9NYU1 1516 aa9.6□□□□□ -0.87
PHTF1-211ENST00000486855 NUDT18Q6ZVK8 323 aa9.59□□□□□ -0.87
PHTF1-211ENST00000486855 TTC13Q8NBP0 860 aa9.59□□□□□ -0.87
PHTF1-211ENST00000486855 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.59□□□□□ -0.87
PHTF1-211ENST00000486855 GRXCR2A6NFK2 248 aa9.58□□□□□ -0.88
PHTF1-211ENST00000486855 RAPGEF2Q9Y4G8 1499 aa9.58□□□□□ -0.88
PHTF1-211ENST00000486855 RTN4Q9NQC3 1192 aaKnown RBP9.57□□□□□ -0.88
PHTF1-211ENST00000486855 ZCCHC11Q5TAX3 1644 aaKnown RBP9.56□□□□□ -0.88
PHTF1-211ENST00000486855 PRXQ9BXM0 1461 aa9.56□□□□□ -0.88
PHTF1-211ENST00000486855 BBXQ8WY36 941 aaPredicted RBP9.56□□□□□ -0.88
PHTF1-211ENST00000486855 NPDC1Q9NQX5 325 aaPredicted RBP9.56□□□□□ -0.88
PHTF1-211ENST00000486855 RBM27Q9P2N5 1060 aaKnown RBP9.56□□□□□ -0.88
PHTF1-211ENST00000486855 ABCC2Q92887 1545 aa9.56□□□□□ -0.88
PHTF1-211ENST00000486855 ABCC10Q5T3U5 1492 aa9.55□□□□□ -0.88
PHTF1-211ENST00000486855 E2F4Q16254 413 aa9.55□□□□□ -0.88
PHTF1-211ENST00000486855 RNF40O75150 1001 aa9.54□□□□□ -0.88
PHTF1-211ENST00000486855 SWT1Q5T5J6 900 aaKnown RBP9.54□□□□□ -0.88
PHTF1-211ENST00000486855 EMID1Q96A84 441 aaPredicted RBP9.54□□□□□ -0.88
PHTF1-211ENST00000486855 UHRF1BP1LA0JNW5 1464 aa9.53□□□□□ -0.88
PHTF1-211ENST00000486855 MAP3K4Q9Y6R4 1608 aa9.53□□□□□ -0.88
PHTF1-211ENST00000486855 COPS2P61201 443 aa9.52□□□□□ -0.89
PHTF1-211ENST00000486855 SAMD9Q5K651 1589 aa9.52□□□□□ -0.89
PHTF1-211ENST00000486855 PADI6Q6TGC4 694 aa9.52□□□□□ -0.89
PHTF1-211ENST00000486855 TRIM67Q6ZTA4 783 aa9.52□□□□□ -0.89
PHTF1-211ENST00000486855 PDZRN3Q9UPQ7 1066 aa9.52□□□□□ -0.89
PHTF1-211ENST00000486855 ABCA8O94911 1581 aa9.51□□□□□ -0.89
PHTF1-211ENST00000486855 GLI2P10070 1586 aa9.51□□□□□ -0.89
PHTF1-211ENST00000486855 TNIKQ9UKE5 1360 aa9.5□□□□□ -0.89
PHTF1-211ENST00000486855 KDM5BQ9UGL1 1544 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms