RNA–Protein interactions for RNA: ENST00000486428.6

CCNC-206, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-206ENST00000486428 TTC13Q8NBP0 860 aa11.04□□□□□ -0.64
CCNC-206ENST00000486428 MTRQ99707 1265 aa11.04□□□□□ -0.64
CCNC-206ENST00000486428 TJAP1Q5JTD0 557 aa11.03□□□□□ -0.64
CCNC-206ENST00000486428 GGCXP38435 758 aa11.02□□□□□ -0.65
CCNC-206ENST00000486428 KCNV2Q8TDN2 545 aa11.01□□□□□ -0.65
CCNC-206ENST00000486428 TSHZ2Q9NRE2 1034 aa11.01□□□□□ -0.65
CCNC-206ENST00000486428 SWT1Q5T5J6 900 aaKnown RBP11□□□□□ -0.65
CCNC-206ENST00000486428 RBM46Q8TBY0 533 aaKnown RBP11□□□□□ -0.65
CCNC-206ENST00000486428 NPDC1Q9NQX5 325 aaPredicted RBP11□□□□□ -0.65
CCNC-206ENST00000486428 Q6ZNB5 142 aa10.99□□□□□ -0.65
CCNC-206ENST00000486428 CADPSQ9ULU8 1353 aa10.99□□□□□ -0.65
CCNC-206ENST00000486428 MRC2Q9UBG0 1479 aa10.99□□□□□ -0.65
CCNC-206ENST00000486428 BAZ1AQ9NRL2 1556 aaPredicted RBP10.99□□□□□ -0.65
CCNC-206ENST00000486428 C3orf80F5H4A9 247 aa10.97□□□□□ -0.65
CCNC-206ENST00000486428 DNAJB2P25686 324 aa10.97□□□□□ -0.65
CCNC-206ENST00000486428 MLLT3P42568 568 aaPredicted RBP10.96□□□□□ -0.65
CCNC-206ENST00000486428 APLP1P51693 650 aa10.96□□□□□ -0.65
CCNC-206ENST00000486428 PTGDRQ13258 359 aa10.95□□□□□ -0.66
CCNC-206ENST00000486428 EYA1Q99502 592 aa10.95□□□□□ -0.66
CCNC-206ENST00000486428 NUTM2FA1L443 756 aa10.94□□□□□ -0.66
CCNC-206ENST00000486428 CYB5RLQ6IPT4 315 aa10.94□□□□□ -0.66
CCNC-206ENST00000486428 PPP1R18Q6NYC8 613 aa10.94□□□□□ -0.66
CCNC-206ENST00000486428 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.94□□□□□ -0.66
CCNC-206ENST00000486428 V9GY48 417 aaPredicted RBP10.94□□□□□ -0.66
CCNC-206ENST00000486428 PRKD2Q9BZL6 878 aa10.93□□□□□ -0.66
CCNC-206ENST00000486428 WDR62O43379 1518 aa10.93□□□□□ -0.66
CCNC-206ENST00000486428 FCHSD2O94868 740 aa10.92□□□□□ -0.66
CCNC-206ENST00000486428 KMT5BQ4FZB7 885 aa10.92□□□□□ -0.66
CCNC-206ENST00000486428 PCDHB3Q9Y5E6 796 aa10.92□□□□□ -0.66
CCNC-206ENST00000486428 PEG3Q9GZU2 1588 aa10.91□□□□□ -0.66
CCNC-206ENST00000486428 COPS2P61201 443 aa10.91□□□□□ -0.66
CCNC-206ENST00000486428 SMYD5Q6GMV2 418 aa10.91□□□□□ -0.66
CCNC-206ENST00000486428 TMUB1Q9BVT8 246 aa10.91□□□□□ -0.66
CCNC-206ENST00000486428 RIMBP3CA6NJZ7 1639 aa10.89□□□□□ -0.67
CCNC-206ENST00000486428 RIMBP3BA6NNM3 1639 aa10.89□□□□□ -0.67
CCNC-206ENST00000486428 RIMBP3Q9UFD9 1639 aa10.89□□□□□ -0.67
CCNC-206ENST00000486428 GFRA3O60609 400 aa10.89□□□□□ -0.67
CCNC-206ENST00000486428 ZNF516Q92618 1163 aa10.89□□□□□ -0.67
CCNC-206ENST00000486428 ZPR1O75312 459 aa10.88□□□□□ -0.67
CCNC-206ENST00000486428 RSPH4AQ5TD94 716 aa10.88□□□□□ -0.67
CCNC-206ENST00000486428 TMEM134Q9H6X4 195 aa10.88□□□□□ -0.67
CCNC-206ENST00000486428 MROH2BQ7Z745 1585 aa10.87□□□□□ -0.67
CCNC-206ENST00000486428 ADGRG1Q9Y653 693 aa10.87□□□□□ -0.67
CCNC-206ENST00000486428 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.86□□□□□ -0.67
CCNC-206ENST00000486428 NRG2O14511 850 aaPredicted RBP10.86□□□□□ -0.67
CCNC-206ENST00000486428 OATP04181 439 aa10.86□□□□□ -0.67
CCNC-206ENST00000486428 CEP164Q9UPV0 1460 aa10.86□□□□□ -0.67
CCNC-206ENST00000486428 RCCD1A6NED2 376 aa10.84□□□□□ -0.67
CCNC-206ENST00000486428 FANCD2Q9BXW9 1451 aa10.83□□□□□ -0.68
CCNC-206ENST00000486428 HIC1Q14526 733 aa10.83□□□□□ -0.68
CCNC-206ENST00000486428 SEMA3EO15041 775 aa10.82□□□□□ -0.68
CCNC-206ENST00000486428 ACTN4O43707 911 aaKnown RBP10.82□□□□□ -0.68
CCNC-206ENST00000486428 ARHGEF11O15085 1522 aa10.82□□□□□ -0.68
CCNC-206ENST00000486428 CFHP08603 1231 aa10.81□□□□□ -0.68
CCNC-206ENST00000486428 NKX2-3Q8TAU0 364 aa10.81□□□□□ -0.68
CCNC-206ENST00000486428 TRAF7Q6Q0C0 670 aa10.8□□□□□ -0.68
CCNC-206ENST00000486428 BLOC1S3Q6QNY0 202 aa10.8□□□□□ -0.68
CCNC-206ENST00000486428 NR1I2O75469 434 aa10.79□□□□□ -0.68
CCNC-206ENST00000486428 PLCB2Q00722 1185 aa10.79□□□□□ -0.68
CCNC-206ENST00000486428 PDZRN3Q9UPQ7 1066 aa10.78□□□□□ -0.68
CCNC-206ENST00000486428 URB2Q14146 1524 aaKnown RBP10.76□□□□□ -0.69
CCNC-206ENST00000486428 PXYLP1Q8TE99 480 aa10.76□□□□□ -0.69
CCNC-206ENST00000486428 TESPA1A2RU30 521 aaPredicted RBP10.74□□□□□ -0.69
CCNC-206ENST00000486428 GNPATO15228 680 aa10.74□□□□□ -0.69
CCNC-206ENST00000486428 ANKLE1Q8NAG6 615 aa10.74□□□□□ -0.69
CCNC-206ENST00000486428 RNF223E7ERA6 249 aa10.73□□□□□ -0.69
CCNC-206ENST00000486428 SLC19A1P41440 591 aa10.73□□□□□ -0.69
CCNC-206ENST00000486428 FAM161AQ3B820 660 aa10.73□□□□□ -0.69
CCNC-206ENST00000486428 CFTRP13569 1480 aa10.73□□□□□ -0.69
CCNC-206ENST00000486428 ZNF608Q9ULD9 1512 aaPredicted RBP10.73□□□□□ -0.69
CCNC-206ENST00000486428 ADH1BP00325 375 aa10.72□□□□□ -0.69
CCNC-206ENST00000486428 METTL3Q86U44 580 aaKnown RBP10.72□□□□□ -0.69
CCNC-206ENST00000486428 WIZO95785 1651 aa10.71□□□□□ -0.69
CCNC-206ENST00000486428 TULP1O00294 542 aaPredicted RBP10.7□□□□□ -0.7
CCNC-206ENST00000486428 TLL1O43897 1013 aa10.7□□□□□ -0.7
CCNC-206ENST00000486428 SLC10A3P09131 477 aa10.69□□□□□ -0.7
CCNC-206ENST00000486428 RBM26Q5T8P6 1007 aaKnown RBP10.69□□□□□ -0.7
CCNC-206ENST00000486428 SULF1Q8IWU6 871 aa10.69□□□□□ -0.7
CCNC-206ENST00000486428 SLC6A16Q9GZN6 736 aa10.69□□□□□ -0.7
CCNC-206ENST00000486428 ARAP1Q96P48 1450 aa10.68□□□□□ -0.7
CCNC-206ENST00000486428 S1PR4O95977 384 aa10.68□□□□□ -0.7
CCNC-206ENST00000486428 RDH13Q8NBN7 331 aa10.68□□□□□ -0.7
CCNC-206ENST00000486428 DAXXQ9UER7 740 aaPredicted RBP10.68□□□□□ -0.7
CCNC-206ENST00000486428 IFT140Q96RY7 1462 aa10.67□□□□□ -0.7
CCNC-206ENST00000486428 SPRYD7Q5W111 196 aa10.66□□□□□ -0.7
CCNC-206ENST00000486428 ZNF598Q86UK7 904 aaKnown RBP10.66□□□□□ -0.7
CCNC-206ENST00000486428 HAP1P54257 671 aaPredicted RBP10.65□□□□□ -0.7
CCNC-206ENST00000486428 PKDCCQ504Y2 493 aa10.65□□□□□ -0.7
CCNC-206ENST00000486428 GPIHBP1Q8IV16 184 aa10.65□□□□□ -0.7
CCNC-206ENST00000486428 SCUBE3Q8IX30 993 aa10.65□□□□□ -0.7
CCNC-206ENST00000486428 SPSB2Q99619 263 aa10.64□□□□□ -0.71
CCNC-206ENST00000486428 PRR20EP86478 221 aa10.63□□□□□ -0.71
CCNC-206ENST00000486428 PRR20CP86479 221 aa10.63□□□□□ -0.71
CCNC-206ENST00000486428 PRR20DP86480 221 aa10.63□□□□□ -0.71
CCNC-206ENST00000486428 PRR20BP86481 221 aa10.63□□□□□ -0.71
CCNC-206ENST00000486428 PRR20AP86496 221 aa10.63□□□□□ -0.71
CCNC-206ENST00000486428 GRIPAP1Q4V328 841 aa10.63□□□□□ -0.71
CCNC-206ENST00000486428 AQRO60306 1485 aaKnown RBP eCLIP10.62□□□□□ -0.71
CCNC-206ENST00000486428 DDX11L8A8MPP1 907 aa10.62□□□□□ -0.71
CCNC-206ENST00000486428 ZNF697Q5TEC3 545 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms