RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 ADAMTSL3P82987 1691 aa20.39■□□□□ 0.86
COL9A1-207ENST00000486080 NEXMIFQ5QGS0 1516 aa20.39■□□□□ 0.85
COL9A1-207ENST00000486080 RPGRIP1LQ68CZ1 1315 aa20.39■□□□□ 0.85
COL9A1-207ENST00000486080 CARD11Q9BXL7 1154 aa20.39■□□□□ 0.85
COL9A1-207ENST00000486080 NUTM2DQ5VT03 806 aaPredicted RBP20.37■□□□□ 0.85
COL9A1-207ENST00000486080 NRXN1Q9ULB1 1477 aa20.37■□□□□ 0.85
COL9A1-207ENST00000486080 STAG3Q9UJ98 1225 aa20.37■□□□□ 0.85
COL9A1-207ENST00000486080 USP47Q96K76 1375 aa20.36■□□□□ 0.85
COL9A1-207ENST00000486080 A2ML1A8K2U0 1454 aa20.35■□□□□ 0.85
COL9A1-207ENST00000486080 GPRASP1Q5JY77 1395 aa20.35■□□□□ 0.85
COL9A1-207ENST00000486080 KIAA1210Q9ULL0 1709 aa20.34■□□□□ 0.85
COL9A1-207ENST00000486080 DIEXFQ68CQ4 756 aaKnown RBP20.33■□□□□ 0.85
COL9A1-207ENST00000486080 LAMC1P11047 1609 aa20.33■□□□□ 0.84
COL9A1-207ENST00000486080 CFAP70Q5T0N1 1121 aa20.32■□□□□ 0.84
COL9A1-207ENST00000486080 PIK3C2GO75747 1445 aa20.31■□□□□ 0.84
COL9A1-207ENST00000486080 UBR1Q8IWV7 1749 aa20.3■□□□□ 0.84
COL9A1-207ENST00000486080 VGFO15240 615 aaPredicted RBP20.3■□□□□ 0.84
COL9A1-207ENST00000486080 KDM4FA0A1W2PPD8 638 aa20.3■□□□□ 0.84
COL9A1-207ENST00000486080 NLRP1Q9C000 1473 aa20.29■□□□□ 0.84
COL9A1-207ENST00000486080 ZFYVE9O95405 1425 aa20.28■□□□□ 0.84
COL9A1-207ENST00000486080 KDM5AP29375 1690 aaKnown RBP20.28■□□□□ 0.84
COL9A1-207ENST00000486080 SENP3Q9H4L4 574 aaPredicted RBP20.27■□□□□ 0.84
COL9A1-207ENST00000486080 ST20-MTHFSA0A0A6YYL1 179 aa20.27■□□□□ 0.84
COL9A1-207ENST00000486080 C11orf95C9JLR9 678 aaPredicted RBP20.27■□□□□ 0.84
COL9A1-207ENST00000486080 RIMS2Q9UQ26 1411 aa20.27■□□□□ 0.83
COL9A1-207ENST00000486080 IQGAP1P46940 1657 aa20.26■□□□□ 0.83
COL9A1-207ENST00000486080 C14orf93Q9H972 538 aaKnown RBP20.26■□□□□ 0.83
COL9A1-207ENST00000486080 MYO3AQ8NEV4 1616 aa20.25■□□□□ 0.83
COL9A1-207ENST00000486080 WASHC2AQ641Q2 1341 aa20.24■□□□□ 0.83
COL9A1-207ENST00000486080 SETBP1Q9Y6X0 1596 aa20.22■□□□□ 0.83
COL9A1-207ENST00000486080 DDX10Q13206 875 aaKnown RBP20.22■□□□□ 0.83
COL9A1-207ENST00000486080 POLR1AO95602 1720 aaPredicted RBP20.22■□□□□ 0.83
COL9A1-207ENST00000486080 SCAF11Q99590 1463 aaKnown RBP20.21■□□□□ 0.83
COL9A1-207ENST00000486080 ADGRB1O14514 1584 aa20.21■□□□□ 0.83
COL9A1-207ENST00000486080 TMEM2Q9UHN6 1383 aa20.21■□□□□ 0.83
COL9A1-207ENST00000486080 TMEM132EQ6IEE7 984 aa20.2■□□□□ 0.82
COL9A1-207ENST00000486080 PTPRMP28827 1452 aa20.19■□□□□ 0.82
COL9A1-207ENST00000486080 CCDC7Q96M83 1385 aa20.19■□□□□ 0.82
COL9A1-207ENST00000486080 SETD1BQ9UPS6 1966 aaKnown RBP20.18■□□□□ 0.82
COL9A1-207ENST00000486080 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.18■□□□□ 0.82
COL9A1-207ENST00000486080 KIF7Q2M1P5 1343 aa20.17■□□□□ 0.82
COL9A1-207ENST00000486080 CEP170BQ9Y4F5 1589 aaPredicted RBP20.17■□□□□ 0.82
COL9A1-207ENST00000486080 ALKQ9UM73 1620 aa20.17■□□□□ 0.82
COL9A1-207ENST00000486080 ASXL1Q8IXJ9 1541 aa20.16■□□□□ 0.82
COL9A1-207ENST00000486080 TESK2Q96S53 571 aa20.16■□□□□ 0.82
COL9A1-207ENST00000486080 NRXN3Q9Y4C0 1643 aa20.15■□□□□ 0.82
COL9A1-207ENST00000486080 LTKP29376 864 aa20.14■□□□□ 0.81
COL9A1-207ENST00000486080 HDGFP51858 240 aaKnown RBP20.14■□□□□ 0.81
COL9A1-207ENST00000486080 THEMISQ8N1K5 641 aaPredicted RBP20.13■□□□□ 0.81
COL9A1-207ENST00000486080 SLIT1O75093 1534 aa20.13■□□□□ 0.81
COL9A1-207ENST00000486080 SETD1AO15047 1707 aaKnown RBP20.13■□□□□ 0.81
COL9A1-207ENST00000486080 ZNF142P52746 1687 aaPredicted RBP20.13■□□□□ 0.81
COL9A1-207ENST00000486080 ARHGAP23Q9P227 1491 aa20.13■□□□□ 0.81
COL9A1-207ENST00000486080 TRAK1Q9UPV9 953 aa20.13■□□□□ 0.81
COL9A1-207ENST00000486080 EIF3AQ14152 1382 aaKnown RBP20.12■□□□□ 0.81
COL9A1-207ENST00000486080 TXNDC2Q86VQ3 553 aa20.11■□□□□ 0.81
COL9A1-207ENST00000486080 POLR3GLQ9BT43 218 aa20.11■□□□□ 0.81
COL9A1-207ENST00000486080 DISP3Q9P2K9 1392 aa20.1■□□□□ 0.81
COL9A1-207ENST00000486080 ARHGEF28Q8N1W1 1705 aaKnown RBP20.09■□□□□ 0.81
COL9A1-207ENST00000486080 EID1Q9Y6B2 187 aa20.09■□□□□ 0.81
COL9A1-207ENST00000486080 MIER1Q8N108 512 aa20.08■□□□□ 0.8
COL9A1-207ENST00000486080 BCANQ96GW7 911 aa20.08■□□□□ 0.8
COL9A1-207ENST00000486080 STK26Q9P289 416 aa20.08■□□□□ 0.8
COL9A1-207ENST00000486080 PLEKHG1Q9ULL1 1385 aa20.07■□□□□ 0.8
COL9A1-207ENST00000486080 YTHDC2Q9H6S0 1430 aaKnown RBP20.07■□□□□ 0.8
COL9A1-207ENST00000486080 QRICH2Q9H0J4 1663 aa20.05■□□□□ 0.8
COL9A1-207ENST00000486080 CENPJQ9HC77 1338 aaPredicted RBP20.05■□□□□ 0.8
COL9A1-207ENST00000486080 TMF1P82094 1093 aa20.05■□□□□ 0.8
COL9A1-207ENST00000486080 METP08581 1390 aa20.05■□□□□ 0.8
COL9A1-207ENST00000486080 ADAMTS13Q76LX8 1427 aa20.05■□□□□ 0.8
COL9A1-207ENST00000486080 SLC26A8Q96RN1 970 aa20.01■□□□□ 0.79
COL9A1-207ENST00000486080 MED14O60244 1454 aa20■□□□□ 0.79
COL9A1-207ENST00000486080 LRPPRCP42704 1394 aaKnown RBP20■□□□□ 0.79
COL9A1-207ENST00000486080 SBNO2Q9Y2G9 1366 aa19.99■□□□□ 0.79
COL9A1-207ENST00000486080 SAFB2Q14151 953 aaKnown RBP eCLIP19.99■□□□□ 0.79
COL9A1-207ENST00000486080 ANKLE2Q86XL3 938 aa19.97■□□□□ 0.79
COL9A1-207ENST00000486080 PRAM1Q96QH2 718 aa19.97■□□□□ 0.79
COL9A1-207ENST00000486080 ABCC11Q96J66 1382 aa19.97■□□□□ 0.79
COL9A1-207ENST00000486080 DLC1Q96QB1 1528 aa19.96■□□□□ 0.79
COL9A1-207ENST00000486080 KNDC1Q76NI1 1749 aa19.95■□□□□ 0.78
COL9A1-207ENST00000486080 SLC24A1O60721 1099 aa19.95■□□□□ 0.78
COL9A1-207ENST00000486080 POGKQ9P215 609 aa19.95■□□□□ 0.78
COL9A1-207ENST00000486080 TBX22Q9Y458 520 aa19.95■□□□□ 0.78
COL9A1-207ENST00000486080 WAPLQ7Z5K2 1190 aa19.94■□□□□ 0.78
COL9A1-207ENST00000486080 PLEKHH1Q9ULM0 1364 aa19.93■□□□□ 0.78
COL9A1-207ENST00000486080 CDCA8Q53HL2 280 aa19.93■□□□□ 0.78
COL9A1-207ENST00000486080 DIP2AQ14689 1571 aa19.93■□□□□ 0.78
COL9A1-207ENST00000486080 PTPRUQ92729 1446 aa19.93■□□□□ 0.78
COL9A1-207ENST00000486080 LMTK3Q96Q04 1460 aa19.92■□□□□ 0.78
COL9A1-207ENST00000486080 TULP4Q9NRJ4 1543 aa19.92■□□□□ 0.78
COL9A1-207ENST00000486080 MYOM1P52179 1685 aa19.92■□□□□ 0.78
COL9A1-207ENST00000486080 TECPR2O15040 1411 aa19.92■□□□□ 0.78
COL9A1-207ENST00000486080 MINK1Q8N4C8 1332 aaPredicted RBP19.91■□□□□ 0.78
COL9A1-207ENST00000486080 CPS1P31327 1500 aa19.91■□□□□ 0.78
COL9A1-207ENST00000486080 ANP32CO43423 234 aa19.9■□□□□ 0.78
COL9A1-207ENST00000486080 NCKAP5LQ9HCH0 1330 aa19.9■□□□□ 0.78
COL9A1-207ENST00000486080 ROBO2Q9HCK4 1378 aa19.89■□□□□ 0.77
COL9A1-207ENST00000486080 AEBP2Q6ZN18 517 aaPredicted RBP19.88■□□□□ 0.77
COL9A1-207ENST00000486080 EVC2Q86UK5 1308 aa19.88■□□□□ 0.77
COL9A1-207ENST00000486080 NPHP4O75161 1426 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms