RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 PPP4CP60510 307 aa11.41□□□□□ -0.58
SMARCC1-207ENST00000485833 ZC3H15Q8WU90 426 aaKnown RBP11.41□□□□□ -0.58
SMARCC1-207ENST00000485833 MINK1Q8N4C8 1332 aaPredicted RBP11.39□□□□□ -0.59
SMARCC1-207ENST00000485833 IRF6O14896 467 aa11.39□□□□□ -0.59
SMARCC1-207ENST00000485833 NECTIN2Q92692 538 aa11.39□□□□□ -0.59
SMARCC1-207ENST00000485833 ZMYND10O75800 440 aa11.38□□□□□ -0.59
SMARCC1-207ENST00000485833 CCDC102AQ96A19 550 aa11.37□□□□□ -0.59
SMARCC1-207ENST00000485833 PHOX2BQ99453 314 aa11.37□□□□□ -0.59
SMARCC1-207ENST00000485833 BARGINQ6ZT62 677 aa11.36□□□□□ -0.59
SMARCC1-207ENST00000485833 NLRP7Q8WX94 980 aa11.34□□□□□ -0.59
SMARCC1-207ENST00000485833 PLA2G2EQ9NZK7 142 aa11.34□□□□□ -0.59
SMARCC1-207ENST00000485833 DAXXQ9UER7 740 aaPredicted RBP11.33□□□□□ -0.6
SMARCC1-207ENST00000485833 KRI1Q8N9T8 703 aaKnown RBP11.32□□□□□ -0.6
SMARCC1-207ENST00000485833 APLP1P51693 650 aa11.31□□□□□ -0.6
SMARCC1-207ENST00000485833 ITGBL1O95965 494 aaPredicted RBP11.29□□□□□ -0.6
SMARCC1-207ENST00000485833 SLC10A3P09131 477 aa11.29□□□□□ -0.6
SMARCC1-207ENST00000485833 PRR14Q9BWN1 585 aa11.29□□□□□ -0.6
SMARCC1-207ENST00000485833 CFHP08603 1231 aa11.27□□□□□ -0.61
SMARCC1-207ENST00000485833 RSPH4AQ5TD94 716 aa11.27□□□□□ -0.61
SMARCC1-207ENST00000485833 KMT5BQ4FZB7 885 aa11.26□□□□□ -0.61
SMARCC1-207ENST00000485833 IFFO2Q5TF58 517 aa11.26□□□□□ -0.61
SMARCC1-207ENST00000485833 SULF1Q8IWU6 871 aa11.26□□□□□ -0.61
SMARCC1-207ENST00000485833 DDX11L8A8MPP1 907 aa11.25□□□□□ -0.61
SMARCC1-207ENST00000485833 MDM2Q00987 491 aaPredicted RBP11.25□□□□□ -0.61
SMARCC1-207ENST00000485833 RDH13Q8NBN7 331 aa11.24□□□□□ -0.61
SMARCC1-207ENST00000485833 KCNC4Q03721 635 aa11.23□□□□□ -0.61
SMARCC1-207ENST00000485833 MTRQ99707 1265 aa11.23□□□□□ -0.61
SMARCC1-207ENST00000485833 ACTN4O43707 911 aaKnown RBP11.22□□□□□ -0.61
SMARCC1-207ENST00000485833 CLCN1P35523 988 aa11.22□□□□□ -0.61
SMARCC1-207ENST00000485833 TJAP1Q5JTD0 557 aa11.22□□□□□ -0.61
SMARCC1-207ENST00000485833 GPCPD1Q9NPB8 672 aa11.22□□□□□ -0.61
SMARCC1-207ENST00000485833 PCDHB3Q9Y5E6 796 aa11.22□□□□□ -0.61
SMARCC1-207ENST00000485833 IL21Q9HBE4 155 aa11.21□□□□□ -0.61
SMARCC1-207ENST00000485833 AMHR2Q16671 573 aa11.2□□□□□ -0.62
SMARCC1-207ENST00000485833 AK7Q96M32 723 aa11.2□□□□□ -0.62
SMARCC1-207ENST00000485833 TMUB1Q9BVT8 246 aa11.19□□□□□ -0.62
SMARCC1-207ENST00000485833 CD46P15529 392 aa11.18□□□□□ -0.62
SMARCC1-207ENST00000485833 COPS2P61201 443 aa11.18□□□□□ -0.62
SMARCC1-207ENST00000485833 SLC24A3Q9HC58 644 aa11.18□□□□□ -0.62
SMARCC1-207ENST00000485833 TRIM66O15016 1216 aa11.17□□□□□ -0.62
SMARCC1-207ENST00000485833 GCGRP47871 477 aa11.17□□□□□ -0.62
SMARCC1-207ENST00000485833 BLOC1S3Q6QNY0 202 aa11.17□□□□□ -0.62
SMARCC1-207ENST00000485833 FAM217BQ9NTX9 383 aaPredicted RBP11.17□□□□□ -0.62
SMARCC1-207ENST00000485833 TTLL12Q14166 644 aaPredicted RBP11.16□□□□□ -0.62
SMARCC1-207ENST00000485833 A0A0G2JS52 829 aa11.15□□□□□ -0.62
SMARCC1-207ENST00000485833 ZNF516Q92618 1163 aa11.15□□□□□ -0.62
SMARCC1-207ENST00000485833 REPIN1Q9BWE0 567 aaKnown RBP11.15□□□□□ -0.62
SMARCC1-207ENST00000485833 ZPR1O75312 459 aa11.13□□□□□ -0.63
SMARCC1-207ENST00000485833 FUT2Q10981 343 aa11.12□□□□□ -0.63
SMARCC1-207ENST00000485833 GIGYF2Q6Y7W6 1299 aaKnown RBP11.12□□□□□ -0.63
SMARCC1-207ENST00000485833 PUS10Q3MIT2 529 aaKnown RBP11.11□□□□□ -0.63
SMARCC1-207ENST00000485833 PARP9Q8IXQ6 854 aa11.11□□□□□ -0.63
SMARCC1-207ENST00000485833 NR1I2O75469 434 aa11.1□□□□□ -0.63
SMARCC1-207ENST00000485833 SSTR3P32745 418 aaPredicted RBP11.1□□□□□ -0.63
SMARCC1-207ENST00000485833 ATP6V1AP38606 617 aa11.1□□□□□ -0.63
SMARCC1-207ENST00000485833 PDE4DQ08499 809 aa11.09□□□□□ -0.63
SMARCC1-207ENST00000485833 KDM4AO75164 1064 aa11.08□□□□□ -0.64
SMARCC1-207ENST00000485833 MORN1Q5T089 497 aa11.08□□□□□ -0.64
SMARCC1-207ENST00000485833 TLL1O43897 1013 aa11.07□□□□□ -0.64
SMARCC1-207ENST00000485833 GRIPAP1Q4V328 841 aa11.07□□□□□ -0.64
SMARCC1-207ENST00000485833 NKX2-3Q8TAU0 364 aa11.07□□□□□ -0.64
SMARCC1-207ENST00000485833 USP46P62068 366 aa11.06□□□□□ -0.64
SMARCC1-207ENST00000485833 SCUBE3Q8IX30 993 aa11.06□□□□□ -0.64
SMARCC1-207ENST00000485833 ADH1BP00325 375 aa11.03□□□□□ -0.64
SMARCC1-207ENST00000485833 SLC27A5Q9Y2P5 690 aa11.03□□□□□ -0.64
SMARCC1-207ENST00000485833 HOXA2O43364 376 aa11.02□□□□□ -0.65
SMARCC1-207ENST00000485833 MS4A1P11836 297 aa11.02□□□□□ -0.65
SMARCC1-207ENST00000485833 PPP1R18Q6NYC8 613 aa11.02□□□□□ -0.65
SMARCC1-207ENST00000485833 NUTM1Q86Y26 1132 aa11.02□□□□□ -0.65
SMARCC1-207ENST00000485833 RGS20O76081 388 aa11.01□□□□□ -0.65
SMARCC1-207ENST00000485833 BEGAINQ9BUH8 593 aa11.01□□□□□ -0.65
SMARCC1-207ENST00000485833 GGCXP38435 758 aa11□□□□□ -0.65
SMARCC1-207ENST00000485833 THAP11Q96EK4 314 aa11□□□□□ -0.65
SMARCC1-207ENST00000485833 EIF4ENIF1Q9NRA8 985 aaKnown RBP11□□□□□ -0.65
SMARCC1-207ENST00000485833 FMNL1O95466 1100 aaPredicted RBP10.99□□□□□ -0.65
SMARCC1-207ENST00000485833 SPSB2Q99619 263 aa10.99□□□□□ -0.65
SMARCC1-207ENST00000485833 SALL2Q9Y467 1007 aaPredicted RBP10.99□□□□□ -0.65
SMARCC1-207ENST00000485833 TPRNQ4KMQ1 711 aa10.98□□□□□ -0.65
SMARCC1-207ENST00000485833 SPIRE2Q8WWL2 714 aa10.98□□□□□ -0.65
SMARCC1-207ENST00000485833 HLA-CQ95604 372 aa10.98□□□□□ -0.65
SMARCC1-207ENST00000485833 Q3C1V9 767 aa10.97□□□□□ -0.65
SMARCC1-207ENST00000485833 S1PR4O95977 384 aa10.96□□□□□ -0.65
SMARCC1-207ENST00000485833 BRICD5Q6PL45 260 aa10.96□□□□□ -0.65
SMARCC1-207ENST00000485833 RNF19BQ6ZMZ0 732 aa10.96□□□□□ -0.65
SMARCC1-207ENST00000485833 SLC6A16Q9GZN6 736 aa10.96□□□□□ -0.65
SMARCC1-207ENST00000485833 GUCA2AQ02747 115 aa10.95□□□□□ -0.66
SMARCC1-207ENST00000485833 DIXDC1Q155Q3 683 aa10.94□□□□□ -0.66
SMARCC1-207ENST00000485833 TBC1D2Q9BYX2 928 aa10.94□□□□□ -0.66
SMARCC1-207ENST00000485833 RNF223E7ERA6 249 aa10.93□□□□□ -0.66
SMARCC1-207ENST00000485833 MOXD2PA6NHM9 499 aa10.92□□□□□ -0.66
SMARCC1-207ENST00000485833 FDX1P10109 184 aa10.92□□□□□ -0.66
SMARCC1-207ENST00000485833 MSS51Q4VC12 460 aa10.92□□□□□ -0.66
SMARCC1-207ENST00000485833 GPBP1L1Q9HC44 474 aaPredicted RBP10.92□□□□□ -0.66
SMARCC1-207ENST00000485833 FAM160A2Q8N612 972 aaPredicted RBP10.91□□□□□ -0.66
SMARCC1-207ENST00000485833 ANKLE1Q8NAG6 615 aa10.91□□□□□ -0.66
SMARCC1-207ENST00000485833 KDM4CQ9H3R0 1056 aa10.91□□□□□ -0.66
SMARCC1-207ENST00000485833 NDUFV2P19404 249 aa10.9□□□□□ -0.66
SMARCC1-207ENST00000485833 USB1Q9BQ65 265 aaKnown RBP10.9□□□□□ -0.66
SMARCC1-207ENST00000485833 PCDHGC3Q9UN70 934 aa10.9□□□□□ -0.66
SMARCC1-207ENST00000485833 PPEF1O14829 653 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms