RNA–Protein interactions for RNA: ENST00000485607.1

CLRN1-206, Transcript of clarin 1, humanhuman

TSL 1 (best)

Gene CLRN1, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-206ENST00000485607 GPHNQ9NQX3 736 aaPredicted RBP12.31□□□□□ -0.44
CLRN1-206ENST00000485607 NEO1Q92859 1461 aa12.31□□□□□ -0.44
CLRN1-206ENST00000485607 CDK13Q14004 1512 aaKnown RBP12.31□□□□□ -0.44
CLRN1-206ENST00000485607 DSG2Q14126 1118 aa12.29□□□□□ -0.44
CLRN1-206ENST00000485607 DMRTA1Q5VZB9 504 aa12.29□□□□□ -0.44
CLRN1-206ENST00000485607 HS6ST3Q8IZP7 471 aa12.29□□□□□ -0.44
CLRN1-206ENST00000485607 TTC37Q6PGP7 1564 aa12.29□□□□□ -0.44
CLRN1-206ENST00000485607 PHLDB1Q86UU1 1377 aa12.29□□□□□ -0.44
CLRN1-206ENST00000485607 ARHGAP35Q9NRY4 1499 aa12.28□□□□□ -0.44
CLRN1-206ENST00000485607 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.28□□□□□ -0.44
CLRN1-206ENST00000485607 HECW2Q9P2P5 1572 aa12.28□□□□□ -0.44
CLRN1-206ENST00000485607 PLEKHD1A6NEE1 506 aa12.28□□□□□ -0.44
CLRN1-206ENST00000485607 UBTFP17480 764 aaKnown RBP12.28□□□□□ -0.44
CLRN1-206ENST00000485607 TK2O00142 265 aa12.26□□□□□ -0.45
CLRN1-206ENST00000485607 FANCAO15360 1455 aa12.25□□□□□ -0.45
CLRN1-206ENST00000485607 AKNAQ7Z591 1439 aa12.24□□□□□ -0.45
CLRN1-206ENST00000485607 KCTD12Q96CX2 325 aaKnown RBP12.24□□□□□ -0.45
CLRN1-206ENST00000485607 KCNK17Q96T54 332 aa12.24□□□□□ -0.45
CLRN1-206ENST00000485607 DENND4BO75064 1496 aaPredicted RBP12.23□□□□□ -0.45
CLRN1-206ENST00000485607 FMN1Q68DA7 1419 aa12.23□□□□□ -0.45
CLRN1-206ENST00000485607 UPF1Q92900 1129 aaKnown RBP eCLIP12.23□□□□□ -0.45
CLRN1-206ENST00000485607 RICTORQ6R327 1708 aa12.23□□□□□ -0.45
CLRN1-206ENST00000485607 HECW1Q76N89 1606 aa12.22□□□□□ -0.45
CLRN1-206ENST00000485607 ARHGEF40Q8TER5 1519 aa12.22□□□□□ -0.45
CLRN1-206ENST00000485607 ATP1B4Q9UN42 357 aaPredicted RBP12.22□□□□□ -0.45
CLRN1-206ENST00000485607 ADAMTSL3P82987 1691 aa12.22□□□□□ -0.45
CLRN1-206ENST00000485607 PTPRMP28827 1452 aa12.21□□□□□ -0.46
CLRN1-206ENST00000485607 HRO43593 1189 aa12.2□□□□□ -0.46
CLRN1-206ENST00000485607 CFAP74Q9C0B2 1584 aa12.2□□□□□ -0.46
CLRN1-206ENST00000485607 KIF14Q15058 1648 aa12.19□□□□□ -0.46
CLRN1-206ENST00000485607 ZMYM4Q5VZL5 1548 aa12.19□□□□□ -0.46
CLRN1-206ENST00000485607 BCORL1Q5H9F3 1711 aa12.19□□□□□ -0.46
CLRN1-206ENST00000485607 PLCH2O75038 1416 aa12.19□□□□□ -0.46
CLRN1-206ENST00000485607 YEATS2Q9ULM3 1422 aa12.19□□□□□ -0.46
CLRN1-206ENST00000485607 MADDQ8WXG6 1647 aa12.19□□□□□ -0.46
CLRN1-206ENST00000485607 ARID4BQ4LE39 1312 aaPredicted RBP12.18□□□□□ -0.46
CLRN1-206ENST00000485607 LRRIQ1Q96JM4 1722 aa12.17□□□□□ -0.46
CLRN1-206ENST00000485607 SIGLEC1Q9BZZ2 1709 aa12.17□□□□□ -0.46
CLRN1-206ENST00000485607 ZNF454Q8N9F8 522 aa12.17□□□□□ -0.46
CLRN1-206ENST00000485607 RYDENQ9NUL5 291 aaKnown RBP12.17□□□□□ -0.46
CLRN1-206ENST00000485607 POGZQ7Z3K3 1410 aa12.17□□□□□ -0.46
CLRN1-206ENST00000485607 SCAPERQ9BY12 1400 aa12.17□□□□□ -0.46
CLRN1-206ENST00000485607 ZFYVE16Q7Z3T8 1539 aa12.16□□□□□ -0.46
CLRN1-206ENST00000485607 TROQ12816 1431 aaPredicted RBP12.16□□□□□ -0.46
CLRN1-206ENST00000485607 PCF11O94913 1555 aaKnown RBP12.16□□□□□ -0.46
CLRN1-206ENST00000485607 PTPN5P54829 565 aa12.14□□□□□ -0.47
CLRN1-206ENST00000485607 OXER1Q8TDS5 423 aa12.14□□□□□ -0.47
CLRN1-206ENST00000485607 MYO5CQ9NQX4 1742 aa12.14□□□□□ -0.47
CLRN1-206ENST00000485607 CDK11AQ9UQ88 783 aaPredicted RBP12.13□□□□□ -0.47
CLRN1-206ENST00000485607 MAGI2Q86UL8 1455 aa12.13□□□□□ -0.47
CLRN1-206ENST00000485607 CASKIN1Q8WXD9 1431 aa12.12□□□□□ -0.47
CLRN1-206ENST00000485607 NKX1-1Q15270 411 aaPredicted RBP12.12□□□□□ -0.47
CLRN1-206ENST00000485607 PPP1R15BQ5SWA1 713 aa12.12□□□□□ -0.47
CLRN1-206ENST00000485607 RIMS1Q86UR5 1692 aaKnown RBP12.12□□□□□ -0.47
CLRN1-206ENST00000485607 ARHGAP5Q13017 1502 aa12.11□□□□□ -0.47
CLRN1-206ENST00000485607 EFCAB2Q5VUJ9 269 aa12.11□□□□□ -0.47
CLRN1-206ENST00000485607 VPS9D1Q9Y2B5 631 aa12.11□□□□□ -0.47
CLRN1-206ENST00000485607 CLIP1P30622 1438 aa12.11□□□□□ -0.47
CLRN1-206ENST00000485607 LMTK3Q96Q04 1460 aa12.1□□□□□ -0.47
CLRN1-206ENST00000485607 GOLGA8CPA6NN73 597 aa12.1□□□□□ -0.47
CLRN1-206ENST00000485607 PDE4AP27815 886 aa12.09□□□□□ -0.47
CLRN1-206ENST00000485607 MLECQ14165 292 aa12.09□□□□□ -0.47
CLRN1-206ENST00000485607 CCDC18Q5T9S5 1454 aa12.08□□□□□ -0.47
CLRN1-206ENST00000485607 AFAP1Q8N556 730 aa12.08□□□□□ -0.48
CLRN1-206ENST00000485607 CRISPLD2Q9H0B8 497 aa12.08□□□□□ -0.48
CLRN1-206ENST00000485607 KDM5CP41229 1560 aa12.08□□□□□ -0.48
CLRN1-206ENST00000485607 ATP10AO60312 1499 aa12.08□□□□□ -0.48
CLRN1-206ENST00000485607 ZNF518AQ6AHZ1 1483 aa12.08□□□□□ -0.48
CLRN1-206ENST00000485607 FYCO1Q9BQS8 1478 aa12.08□□□□□ -0.48
CLRN1-206ENST00000485607 ARHGEF12Q9NZN5 1544 aa12.07□□□□□ -0.48
CLRN1-206ENST00000485607 PTPREP23469 700 aa12.07□□□□□ -0.48
CLRN1-206ENST00000485607 C9orf84Q5VXU9 1444 aa12.07□□□□□ -0.48
CLRN1-206ENST00000485607 BCL2L12Q9HB09 334 aa12.07□□□□□ -0.48
CLRN1-206ENST00000485607 PREX2Q70Z35 1606 aa12.07□□□□□ -0.48
CLRN1-206ENST00000485607 CDC42BPBQ9Y5S2 1711 aa12.06□□□□□ -0.48
CLRN1-206ENST00000485607 ABCC1P33527 1531 aa12.06□□□□□ -0.48
CLRN1-206ENST00000485607 TRAPPC8Q9Y2L5 1435 aa12.05□□□□□ -0.48
CLRN1-206ENST00000485607 DIP2CQ9Y2E4 1556 aa12.05□□□□□ -0.48
CLRN1-206ENST00000485607 HSPA2P54652 639 aa12.04□□□□□ -0.48
CLRN1-206ENST00000485607 ABCA6Q8N139 1617 aa12.04□□□□□ -0.48
CLRN1-206ENST00000485607 FER1L4A9Z1Z3 1794 aa12.03□□□□□ -0.48
CLRN1-206ENST00000485607 FOSBP53539 338 aa12.03□□□□□ -0.48
CLRN1-206ENST00000485607 EVI5O60447 810 aa12.02□□□□□ -0.49
CLRN1-206ENST00000485607 MRPL50Q8N5N7 158 aaKnown RBP12.02□□□□□ -0.49
CLRN1-206ENST00000485607 LARP6Q9BRS8 491 aaKnown RBP12.02□□□□□ -0.49
CLRN1-206ENST00000485607 CDC42BPAQ5VT25 1732 aa12.02□□□□□ -0.49
CLRN1-206ENST00000485607 MLH3Q9UHC1 1453 aa12.02□□□□□ -0.49
CLRN1-206ENST00000485607 ITSN2Q9NZM3 1697 aa12.01□□□□□ -0.49
CLRN1-206ENST00000485607 MAP3K9P80192 1104 aa12.01□□□□□ -0.49
CLRN1-206ENST00000485607 CEBPAP49715 358 aaPredicted RBP12□□□□□ -0.49
CLRN1-206ENST00000485607 WNT2BQ93097 391 aa12□□□□□ -0.49
CLRN1-206ENST00000485607 SLC4A5Q9BY07 1137 aa12□□□□□ -0.49
CLRN1-206ENST00000485607 NCKAP5LQ9HCH0 1330 aa12□□□□□ -0.49
CLRN1-206ENST00000485607 GPATCH8Q9UKJ3 1502 aaKnown RBP12□□□□□ -0.49
CLRN1-206ENST00000485607 SAMD9LQ8IVG5 1584 aa12□□□□□ -0.49
CLRN1-206ENST00000485607 REREQ9P2R6 1566 aa12□□□□□ -0.49
CLRN1-206ENST00000485607 ZDHHC16Q969W1 377 aa11.99□□□□□ -0.49
CLRN1-206ENST00000485607 SYCP2Q9BX26 1530 aa11.98□□□□□ -0.49
CLRN1-206ENST00000485607 DDX27Q96GQ7 796 aaKnown RBP11.98□□□□□ -0.49
CLRN1-206ENST00000485607 ZBED2Q9BTP6 218 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms