RNA–Protein interactions for RNA: ENST00000485265.1

CTNNB1-214, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 835 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-214ENST00000485265 MAP2K5Q13163 448 aa13.43□□□□□ -0.26
CTNNB1-214ENST00000485265 IFFO2Q5TF58 517 aa13.43□□□□□ -0.26
CTNNB1-214ENST00000485265 NECTIN2Q92692 538 aa13.42□□□□□ -0.26
CTNNB1-214ENST00000485265 PHOX2BQ99453 314 aa13.42□□□□□ -0.26
CTNNB1-214ENST00000485265 SLC4A3P48751 1232 aa13.41□□□□□ -0.26
CTNNB1-214ENST00000485265 APLP1P51693 650 aa13.41□□□□□ -0.26
CTNNB1-214ENST00000485265 IRF6O14896 467 aa13.38□□□□□ -0.27
CTNNB1-214ENST00000485265 NLRP7Q8WX94 980 aa13.37□□□□□ -0.27
CTNNB1-214ENST00000485265 MINK1Q8N4C8 1332 aaPredicted RBP13.37□□□□□ -0.27
CTNNB1-214ENST00000485265 SLC10A3P09131 477 aa13.35□□□□□ -0.27
CTNNB1-214ENST00000485265 ZC3H15Q8WU90 426 aaKnown RBP13.35□□□□□ -0.27
CTNNB1-214ENST00000485265 TJAP1Q5JTD0 557 aa13.34□□□□□ -0.27
CTNNB1-214ENST00000485265 DAXXQ9UER7 740 aaPredicted RBP13.34□□□□□ -0.27
CTNNB1-214ENST00000485265 ZMYND10O75800 440 aa13.33□□□□□ -0.28
CTNNB1-214ENST00000485265 KCNC4Q03721 635 aa13.33□□□□□ -0.28
CTNNB1-214ENST00000485265 CCDC102AQ96A19 550 aa13.33□□□□□ -0.28
CTNNB1-214ENST00000485265 MTRQ99707 1265 aa13.33□□□□□ -0.28
CTNNB1-214ENST00000485265 PRR14Q9BWN1 585 aa13.31□□□□□ -0.28
CTNNB1-214ENST00000485265 BARGINQ6ZT62 677 aa13.3□□□□□ -0.28
CTNNB1-214ENST00000485265 A0A0G2JS52 829 aa13.29□□□□□ -0.28
CTNNB1-214ENST00000485265 CFHP08603 1231 aa13.29□□□□□ -0.28
CTNNB1-214ENST00000485265 IL21Q9HBE4 155 aa13.28□□□□□ -0.28
CTNNB1-214ENST00000485265 ACTN4O43707 911 aaKnown RBP13.27□□□□□ -0.29
CTNNB1-214ENST00000485265 KMT5BQ4FZB7 885 aa13.27□□□□□ -0.29
CTNNB1-214ENST00000485265 ZNF516Q92618 1163 aa13.26□□□□□ -0.29
CTNNB1-214ENST00000485265 DDX11L8A8MPP1 907 aa13.25□□□□□ -0.29
CTNNB1-214ENST00000485265 PCDHB3Q9Y5E6 796 aa13.25□□□□□ -0.29
CTNNB1-214ENST00000485265 COPS2P61201 443 aa13.24□□□□□ -0.29
CTNNB1-214ENST00000485265 SULF1Q8IWU6 871 aa13.24□□□□□ -0.29
CTNNB1-214ENST00000485265 BCANQ96GW7 911 aa13.24□□□□□ -0.29
CTNNB1-214ENST00000485265 RSPH4AQ5TD94 716 aa13.23□□□□□ -0.29
CTNNB1-214ENST00000485265 MDM2Q00987 491 aaPredicted RBP13.22□□□□□ -0.29
CTNNB1-214ENST00000485265 BLOC1S3Q6QNY0 202 aa13.22□□□□□ -0.29
CTNNB1-214ENST00000485265 KRI1Q8N9T8 703 aaKnown RBP13.22□□□□□ -0.29
CTNNB1-214ENST00000485265 RDH13Q8NBN7 331 aa13.22□□□□□ -0.29
CTNNB1-214ENST00000485265 ZPR1O75312 459 aa13.19□□□□□ -0.3
CTNNB1-214ENST00000485265 GCGRP47871 477 aa13.18□□□□□ -0.3
CTNNB1-214ENST00000485265 TMUB1Q9BVT8 246 aa13.18□□□□□ -0.3
CTNNB1-214ENST00000485265 CD46P15529 392 aa13.17□□□□□ -0.3
CTNNB1-214ENST00000485265 NKX2-3Q8TAU0 364 aa13.17□□□□□ -0.3
CTNNB1-214ENST00000485265 CLCN1P35523 988 aa13.16□□□□□ -0.3
CTNNB1-214ENST00000485265 GPCPD1Q9NPB8 672 aa13.16□□□□□ -0.3
CTNNB1-214ENST00000485265 FUT2Q10981 343 aa13.14□□□□□ -0.31
CTNNB1-214ENST00000485265 PUS10Q3MIT2 529 aaKnown RBP13.14□□□□□ -0.31
CTNNB1-214ENST00000485265 REPIN1Q9BWE0 567 aaKnown RBP13.14□□□□□ -0.31
CTNNB1-214ENST00000485265 RGS20O76081 388 aa13.13□□□□□ -0.31
CTNNB1-214ENST00000485265 AMHR2Q16671 573 aa13.13□□□□□ -0.31
CTNNB1-214ENST00000485265 FAM217BQ9NTX9 383 aaPredicted RBP13.13□□□□□ -0.31
CTNNB1-214ENST00000485265 TLL1O43897 1013 aa13.12□□□□□ -0.31
CTNNB1-214ENST00000485265 PPP1R18Q6NYC8 613 aa13.11□□□□□ -0.31
CTNNB1-214ENST00000485265 NR1I2O75469 434 aa13.1□□□□□ -0.31
CTNNB1-214ENST00000485265 MORN1Q5T089 497 aa13.1□□□□□ -0.31
CTNNB1-214ENST00000485265 SCUBE3Q8IX30 993 aa13.1□□□□□ -0.31
CTNNB1-214ENST00000485265 ATP6V1AP38606 617 aa13.09□□□□□ -0.31
CTNNB1-214ENST00000485265 AK7Q96M32 723 aa13.09□□□□□ -0.31
CTNNB1-214ENST00000485265 TRIM66O15016 1216 aa13.08□□□□□ -0.32
CTNNB1-214ENST00000485265 TTLL12Q14166 644 aaPredicted RBP13.06□□□□□ -0.32
CTNNB1-214ENST00000485265 SLC24A3Q9HC58 644 aa13.06□□□□□ -0.32
CTNNB1-214ENST00000485265 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.06□□□□□ -0.32
CTNNB1-214ENST00000485265 ADH1BP00325 375 aa13.04□□□□□ -0.32
CTNNB1-214ENST00000485265 KDM4AO75164 1064 aa13.03□□□□□ -0.32
CTNNB1-214ENST00000485265 SSTR3P32745 418 aaPredicted RBP13.03□□□□□ -0.32
CTNNB1-214ENST00000485265 GIGYF2Q6Y7W6 1299 aaKnown RBP13.03□□□□□ -0.32
CTNNB1-214ENST00000485265 PARP9Q8IXQ6 854 aa13.03□□□□□ -0.32
CTNNB1-214ENST00000485265 SLC27A5Q9Y2P5 690 aa13.03□□□□□ -0.32
CTNNB1-214ENST00000485265 THAP11Q96EK4 314 aa13.02□□□□□ -0.33
CTNNB1-214ENST00000485265 GRIPAP1Q4V328 841 aa13.01□□□□□ -0.33
CTNNB1-214ENST00000485265 GGCXP38435 758 aa13□□□□□ -0.33
CTNNB1-214ENST00000485265 SPSB2Q99619 263 aa13□□□□□ -0.33
CTNNB1-214ENST00000485265 S1PR4O95977 384 aa12.99□□□□□ -0.33
CTNNB1-214ENST00000485265 USP46P62068 366 aa12.99□□□□□ -0.33
CTNNB1-214ENST00000485265 SALL2Q9Y467 1007 aaPredicted RBP12.99□□□□□ -0.33
CTNNB1-214ENST00000485265 RNF223E7ERA6 249 aa12.98□□□□□ -0.33
CTNNB1-214ENST00000485265 HOXA2O43364 376 aa12.98□□□□□ -0.33
CTNNB1-214ENST00000485265 PDE4DQ08499 809 aa12.97□□□□□ -0.33
CTNNB1-214ENST00000485265 HLA-CQ95604 372 aa12.97□□□□□ -0.33
CTNNB1-214ENST00000485265 BRICD5Q6PL45 260 aa12.96□□□□□ -0.33
CTNNB1-214ENST00000485265 RNF19BQ6ZMZ0 732 aa12.96□□□□□ -0.33
CTNNB1-214ENST00000485265 SLC6A16Q9GZN6 736 aa12.96□□□□□ -0.33
CTNNB1-214ENST00000485265 FMNL1O95466 1100 aaPredicted RBP12.95□□□□□ -0.34
CTNNB1-214ENST00000485265 MS4A1P11836 297 aa12.94□□□□□ -0.34
CTNNB1-214ENST00000485265 PPEF1O14829 653 aaPredicted RBP12.93□□□□□ -0.34
CTNNB1-214ENST00000485265 NUTM1Q86Y26 1132 aa12.93□□□□□ -0.34
CTNNB1-214ENST00000485265 FAM160A2Q8N612 972 aaPredicted RBP12.93□□□□□ -0.34
CTNNB1-214ENST00000485265 PRKD2Q9BZL6 878 aa12.93□□□□□ -0.34
CTNNB1-214ENST00000485265 ANKLE1Q8NAG6 615 aa12.92□□□□□ -0.34
CTNNB1-214ENST00000485265 SPIRE2Q8WWL2 714 aa12.92□□□□□ -0.34
CTNNB1-214ENST00000485265 GUCA2AQ02747 115 aa12.91□□□□□ -0.34
CTNNB1-214ENST00000485265 Q3C1V9 767 aa12.91□□□□□ -0.34
CTNNB1-214ENST00000485265 BEGAINQ9BUH8 593 aa12.91□□□□□ -0.34
CTNNB1-214ENST00000485265 V9GY48 417 aaPredicted RBP12.91□□□□□ -0.34
CTNNB1-214ENST00000485265 EMID1Q96A84 441 aaPredicted RBP12.9□□□□□ -0.34
CTNNB1-214ENST00000485265 PRDM9Q9NQV7 894 aa12.89□□□□□ -0.35
CTNNB1-214ENST00000485265 MSS51Q4VC12 460 aa12.88□□□□□ -0.35
CTNNB1-214ENST00000485265 PLA2G2CQ5R387 149 aa12.86□□□□□ -0.35
CTNNB1-214ENST00000485265 MOXD2PA6NHM9 499 aa12.85□□□□□ -0.35
CTNNB1-214ENST00000485265 USB1Q9BQ65 265 aaKnown RBP12.85□□□□□ -0.35
CTNNB1-214ENST00000485265 PCDHGC3Q9UN70 934 aa12.85□□□□□ -0.35
CTNNB1-214ENST00000485265 FDX1P10109 184 aa12.84□□□□□ -0.35
CTNNB1-214ENST00000485265 NDUFV2P19404 249 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms