RNA–Protein interactions for RNA: ENST00000485180.1

USP9X-207, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-207ENST00000485180 NECTIN2Q92692 538 aa19.1■□□□□ 0.65
USP9X-207ENST00000485180 MAP2K5Q13163 448 aa19.08■□□□□ 0.64
USP9X-207ENST00000485180 ITGBL1O95965 494 aaPredicted RBP19.05■□□□□ 0.64
USP9X-207ENST00000485180 IFFO2Q5TF58 517 aa19.04■□□□□ 0.64
USP9X-207ENST00000485180 APLP1P51693 650 aa19.01■□□□□ 0.63
USP9X-207ENST00000485180 PHOX2BQ99453 314 aa19.01■□□□□ 0.63
USP9X-207ENST00000485180 IRF6O14896 467 aa18.99■□□□□ 0.63
USP9X-207ENST00000485180 MINK1Q8N4C8 1332 aaPredicted RBP18.99■□□□□ 0.63
USP9X-207ENST00000485180 ZC3H15Q8WU90 426 aaKnown RBP18.95■□□□□ 0.62
USP9X-207ENST00000485180 NLRP7Q8WX94 980 aa18.95■□□□□ 0.62
USP9X-207ENST00000485180 DAXXQ9UER7 740 aaPredicted RBP18.94■□□□□ 0.62
USP9X-207ENST00000485180 SLC10A3P09131 477 aa18.93■□□□□ 0.62
USP9X-207ENST00000485180 KCNC4Q03721 635 aa18.93■□□□□ 0.62
USP9X-207ENST00000485180 ZMYND10O75800 440 aa18.92■□□□□ 0.62
USP9X-207ENST00000485180 CCDC102AQ96A19 550 aa18.92■□□□□ 0.62
USP9X-207ENST00000485180 PRR14Q9BWN1 585 aa18.92■□□□□ 0.62
USP9X-207ENST00000485180 TJAP1Q5JTD0 557 aa18.91■□□□□ 0.62
USP9X-207ENST00000485180 MTRQ99707 1265 aa18.9■□□□□ 0.62
USP9X-207ENST00000485180 BARGINQ6ZT62 677 aa18.89■□□□□ 0.61
USP9X-207ENST00000485180 CFHP08603 1231 aa18.88■□□□□ 0.61
USP9X-207ENST00000485180 KMT5BQ4FZB7 885 aa18.86■□□□□ 0.61
USP9X-207ENST00000485180 BCANQ96GW7 911 aa18.86■□□□□ 0.61
USP9X-207ENST00000485180 IL21Q9HBE4 155 aa18.86■□□□□ 0.61
USP9X-207ENST00000485180 A0A0G2JS52 829 aa18.84■□□□□ 0.61
USP9X-207ENST00000485180 RSPH4AQ5TD94 716 aa18.84■□□□□ 0.61
USP9X-207ENST00000485180 ACTN4O43707 911 aaKnown RBP18.83■□□□□ 0.6
USP9X-207ENST00000485180 SULF1Q8IWU6 871 aa18.82■□□□□ 0.6
USP9X-207ENST00000485180 KRI1Q8N9T8 703 aaKnown RBP18.82■□□□□ 0.6
USP9X-207ENST00000485180 DDX11L8A8MPP1 907 aa18.81■□□□□ 0.6
USP9X-207ENST00000485180 PCDHB3Q9Y5E6 796 aa18.81■□□□□ 0.6
USP9X-207ENST00000485180 COPS2P61201 443 aa18.79■□□□□ 0.6
USP9X-207ENST00000485180 RDH13Q8NBN7 331 aa18.79■□□□□ 0.6
USP9X-207ENST00000485180 MDM2Q00987 491 aaPredicted RBP18.77■□□□□ 0.6
USP9X-207ENST00000485180 ZNF516Q92618 1163 aa18.77■□□□□ 0.6
USP9X-207ENST00000485180 BLOC1S3Q6QNY0 202 aa18.75■□□□□ 0.59
USP9X-207ENST00000485180 ZPR1O75312 459 aa18.71■□□□□ 0.59
USP9X-207ENST00000485180 GPCPD1Q9NPB8 672 aa18.71■□□□□ 0.59
USP9X-207ENST00000485180 CLCN1P35523 988 aa18.7■□□□□ 0.58
USP9X-207ENST00000485180 GCGRP47871 477 aa18.7■□□□□ 0.58
USP9X-207ENST00000485180 CD46P15529 392 aa18.69■□□□□ 0.58
USP9X-207ENST00000485180 TMUB1Q9BVT8 246 aa18.69■□□□□ 0.58
USP9X-207ENST00000485180 NKX2-3Q8TAU0 364 aa18.65■□□□□ 0.58
USP9X-207ENST00000485180 RGS20O76081 388 aa18.64■□□□□ 0.57
USP9X-207ENST00000485180 AMHR2Q16671 573 aa18.64■□□□□ 0.57
USP9X-207ENST00000485180 FUT2Q10981 343 aa18.63■□□□□ 0.57
USP9X-207ENST00000485180 FAM217BQ9NTX9 383 aaPredicted RBP18.63■□□□□ 0.57
USP9X-207ENST00000485180 PUS10Q3MIT2 529 aaKnown RBP18.62■□□□□ 0.57
USP9X-207ENST00000485180 REPIN1Q9BWE0 567 aaKnown RBP18.62■□□□□ 0.57
USP9X-207ENST00000485180 NR1I2O75469 434 aa18.61■□□□□ 0.57
USP9X-207ENST00000485180 AK7Q96M32 723 aa18.6■□□□□ 0.57
USP9X-207ENST00000485180 TLL1O43897 1013 aa18.58■□□□□ 0.56
USP9X-207ENST00000485180 ATP6V1AP38606 617 aa18.58■□□□□ 0.56
USP9X-207ENST00000485180 MORN1Q5T089 497 aa18.58■□□□□ 0.56
USP9X-207ENST00000485180 PPP1R18Q6NYC8 613 aa18.58■□□□□ 0.56
USP9X-207ENST00000485180 TRIM66O15016 1216 aa18.57■□□□□ 0.56
USP9X-207ENST00000485180 SCUBE3Q8IX30 993 aa18.57■□□□□ 0.56
USP9X-207ENST00000485180 TTLL12Q14166 644 aaPredicted RBP18.56■□□□□ 0.56
USP9X-207ENST00000485180 SLC24A3Q9HC58 644 aa18.54■□□□□ 0.56
USP9X-207ENST00000485180 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.53■□□□□ 0.56
USP9X-207ENST00000485180 KDM4AO75164 1064 aa18.52■□□□□ 0.56
USP9X-207ENST00000485180 ADH1BP00325 375 aa18.51■□□□□ 0.55
USP9X-207ENST00000485180 GRIPAP1Q4V328 841 aa18.51■□□□□ 0.55
USP9X-207ENST00000485180 SSTR3P32745 418 aaPredicted RBP18.5■□□□□ 0.55
USP9X-207ENST00000485180 GIGYF2Q6Y7W6 1299 aaKnown RBP18.5■□□□□ 0.55
USP9X-207ENST00000485180 GGCXP38435 758 aa18.49■□□□□ 0.55
USP9X-207ENST00000485180 SLC27A5Q9Y2P5 690 aa18.49■□□□□ 0.55
USP9X-207ENST00000485180 PARP9Q8IXQ6 854 aa18.48■□□□□ 0.55
USP9X-207ENST00000485180 USP46P62068 366 aa18.46■□□□□ 0.55
USP9X-207ENST00000485180 THAP11Q96EK4 314 aa18.45■□□□□ 0.54
USP9X-207ENST00000485180 SPSB2Q99619 263 aa18.45■□□□□ 0.54
USP9X-207ENST00000485180 SALL2Q9Y467 1007 aaPredicted RBP18.43■□□□□ 0.54
USP9X-207ENST00000485180 HOXA2O43364 376 aa18.42■□□□□ 0.54
USP9X-207ENST00000485180 S1PR4O95977 384 aa18.42■□□□□ 0.54
USP9X-207ENST00000485180 PDE4DQ08499 809 aa18.42■□□□□ 0.54
USP9X-207ENST00000485180 FMNL1O95466 1100 aaPredicted RBP18.41■□□□□ 0.54
USP9X-207ENST00000485180 RNF223E7ERA6 249 aa18.4■□□□□ 0.54
USP9X-207ENST00000485180 SLC6A16Q9GZN6 736 aa18.4■□□□□ 0.54
USP9X-207ENST00000485180 NUTM1Q86Y26 1132 aa18.39■□□□□ 0.53
USP9X-207ENST00000485180 BRICD5Q6PL45 260 aa18.38■□□□□ 0.53
USP9X-207ENST00000485180 HLA-CQ95604 372 aa18.38■□□□□ 0.53
USP9X-207ENST00000485180 RNF19BQ6ZMZ0 732 aa18.37■□□□□ 0.53
USP9X-207ENST00000485180 MS4A1P11836 297 aa18.36■□□□□ 0.53
USP9X-207ENST00000485180 Q3C1V9 767 aa18.35■□□□□ 0.53
USP9X-207ENST00000485180 SPIRE2Q8WWL2 714 aa18.34■□□□□ 0.53
USP9X-207ENST00000485180 BEGAINQ9BUH8 593 aa18.34■□□□□ 0.53
USP9X-207ENST00000485180 FAM160A2Q8N612 972 aaPredicted RBP18.33■□□□□ 0.52
USP9X-207ENST00000485180 ANKLE1Q8NAG6 615 aa18.33■□□□□ 0.52
USP9X-207ENST00000485180 PRKD2Q9BZL6 878 aa18.33■□□□□ 0.52
USP9X-207ENST00000485180 PPEF1O14829 653 aaPredicted RBP18.32■□□□□ 0.52
USP9X-207ENST00000485180 GUCA2AQ02747 115 aa18.31■□□□□ 0.52
USP9X-207ENST00000485180 V9GY48 417 aaPredicted RBP18.31■□□□□ 0.52
USP9X-207ENST00000485180 MSS51Q4VC12 460 aa18.3■□□□□ 0.52
USP9X-207ENST00000485180 PRDM9Q9NQV7 894 aa18.27■□□□□ 0.52
USP9X-207ENST00000485180 FDX1P10109 184 aa18.24■□□□□ 0.51
USP9X-207ENST00000485180 EMID1Q96A84 441 aaPredicted RBP18.24■□□□□ 0.51
USP9X-207ENST00000485180 USB1Q9BQ65 265 aaKnown RBP18.24■□□□□ 0.51
USP9X-207ENST00000485180 MOXD2PA6NHM9 499 aa18.23■□□□□ 0.51
USP9X-207ENST00000485180 TBC1D2Q9BYX2 928 aa18.23■□□□□ 0.51
USP9X-207ENST00000485180 DIXDC1Q155Q3 683 aa18.22■□□□□ 0.51
USP9X-207ENST00000485180 PCDHGC3Q9UN70 934 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms