RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 PPLO60437 1756 aa24.77■■□□□ 1.56
CCDC78-214ENST00000485091 NEXMIFQ5QGS0 1516 aa24.76■■□□□ 1.55
CCDC78-214ENST00000485091 SENP3Q9H4L4 574 aaPredicted RBP24.75■■□□□ 1.55
CCDC78-214ENST00000485091 MYOM2P54296 1465 aa24.75■■□□□ 1.55
CCDC78-214ENST00000485091 RALGAPBQ86X10 1494 aa24.75■■□□□ 1.55
CCDC78-214ENST00000485091 NBPF1Q3BBV0 1214 aa24.74■■□□□ 1.55
CCDC78-214ENST00000485091 NLRP1Q9C000 1473 aa24.74■■□□□ 1.55
CCDC78-214ENST00000485091 ROCK2O75116 1388 aaKnown RBP24.74■■□□□ 1.55
CCDC78-214ENST00000485091 TRPM1Q7Z4N2 1603 aa24.73■■□□□ 1.55
CCDC78-214ENST00000485091 CARD11Q9BXL7 1154 aa24.73■■□□□ 1.55
CCDC78-214ENST00000485091 VGFO15240 615 aaPredicted RBP24.72■■□□□ 1.55
CCDC78-214ENST00000485091 UBR1Q8IWV7 1749 aa24.7■■□□□ 1.54
CCDC78-214ENST00000485091 EIF4G2P78344 907 aaKnown RBP eCLIP24.69■■□□□ 1.54
CCDC78-214ENST00000485091 CFAP70Q5T0N1 1121 aa24.69■■□□□ 1.54
CCDC78-214ENST00000485091 MYO3AQ8NEV4 1616 aa24.69■■□□□ 1.54
CCDC78-214ENST00000485091 RIMS2Q9UQ26 1411 aa24.69■■□□□ 1.54
CCDC78-214ENST00000485091 HSPA5P11021 654 aaKnown RBP24.69■■□□□ 1.54
CCDC78-214ENST00000485091 NRXN1Q9ULB1 1477 aa24.67■■□□□ 1.54
CCDC78-214ENST00000485091 PIK3C2GO75747 1445 aa24.65■■□□□ 1.54
CCDC78-214ENST00000485091 KDM5AP29375 1690 aaKnown RBP24.64■■□□□ 1.53
CCDC78-214ENST00000485091 USP47Q96K76 1375 aa24.63■■□□□ 1.53
CCDC78-214ENST00000485091 TMEM2Q9UHN6 1383 aa24.63■■□□□ 1.53
CCDC78-214ENST00000485091 ZFYVE9O95405 1425 aa24.63■■□□□ 1.53
CCDC78-214ENST00000485091 THEMISQ8N1K5 641 aaPredicted RBP24.62■■□□□ 1.53
CCDC78-214ENST00000485091 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.62■■□□□ 1.53
CCDC78-214ENST00000485091 CEP170BQ9Y4F5 1589 aaPredicted RBP24.62■■□□□ 1.53
CCDC78-214ENST00000485091 HDGFP51858 240 aaKnown RBP24.61■■□□□ 1.53
CCDC78-214ENST00000485091 C14orf93Q9H972 538 aaKnown RBP24.61■■□□□ 1.53
CCDC78-214ENST00000485091 GPRASP1Q5JY77 1395 aa24.61■■□□□ 1.53
CCDC78-214ENST00000485091 KIAA1210Q9ULL0 1709 aa24.6■■□□□ 1.53
CCDC78-214ENST00000485091 TMEM132EQ6IEE7 984 aa24.58■■□□□ 1.52
CCDC78-214ENST00000485091 TXNDC2Q86VQ3 553 aa24.58■■□□□ 1.52
CCDC78-214ENST00000485091 BCANQ96GW7 911 aa24.58■■□□□ 1.52
CCDC78-214ENST00000485091 LTKP29376 864 aa24.56■■□□□ 1.52
CCDC78-214ENST00000485091 SETD1BQ9UPS6 1966 aaKnown RBP24.56■■□□□ 1.52
CCDC78-214ENST00000485091 EID1Q9Y6B2 187 aa24.55■■□□□ 1.52
CCDC78-214ENST00000485091 LAMC1P11047 1609 aa24.55■■□□□ 1.52
CCDC78-214ENST00000485091 ST20-MTHFSA0A0A6YYL1 179 aa24.54■■□□□ 1.52
CCDC78-214ENST00000485091 ZNF142P52746 1687 aaPredicted RBP24.53■■□□□ 1.52
CCDC78-214ENST00000485091 LMTK3Q96Q04 1460 aa24.52■■□□□ 1.52
CCDC78-214ENST00000485091 SLIT1O75093 1534 aa24.52■■□□□ 1.52
CCDC78-214ENST00000485091 ARHGAP23Q9P227 1491 aa24.52■■□□□ 1.51
CCDC78-214ENST00000485091 SCAF11Q99590 1463 aaKnown RBP24.5■■□□□ 1.51
CCDC78-214ENST00000485091 ALKQ9UM73 1620 aa24.5■■□□□ 1.51
CCDC78-214ENST00000485091 SETBP1Q9Y6X0 1596 aa24.5■■□□□ 1.51
CCDC78-214ENST00000485091 TRAK1Q9UPV9 953 aa24.49■■□□□ 1.51
CCDC78-214ENST00000485091 IQGAP1P46940 1657 aa24.48■■□□□ 1.51
CCDC78-214ENST00000485091 ADGRB1O14514 1584 aa24.48■■□□□ 1.51
CCDC78-214ENST00000485091 HSPA2P54652 639 aa24.47■■□□□ 1.51
CCDC78-214ENST00000485091 STK26Q9P289 416 aa24.47■■□□□ 1.51
CCDC78-214ENST00000485091 PLEKHG1Q9ULL1 1385 aa24.46■■□□□ 1.51
CCDC78-214ENST00000485091 C11orf95C9JLR9 678 aaPredicted RBP24.46■■□□□ 1.51
CCDC78-214ENST00000485091 NRXN3Q9Y4C0 1643 aa24.46■■□□□ 1.51
CCDC78-214ENST00000485091 ASXL1Q8IXJ9 1541 aa24.45■■□□□ 1.5
CCDC78-214ENST00000485091 ANKLE2Q86XL3 938 aa24.44■■□□□ 1.5
CCDC78-214ENST00000485091 SLC26A8Q96RN1 970 aa24.43■■□□□ 1.5
CCDC78-214ENST00000485091 EIF3AQ14152 1382 aaKnown RBP24.43■■□□□ 1.5
CCDC78-214ENST00000485091 POLR3GLQ9BT43 218 aa24.41■■□□□ 1.5
CCDC78-214ENST00000485091 WASHC2AQ641Q2 1341 aa24.41■■□□□ 1.5
CCDC78-214ENST00000485091 DIEXFQ68CQ4 756 aaKnown RBP24.41■■□□□ 1.5
CCDC78-214ENST00000485091 ADAMTS13Q76LX8 1427 aa24.4■■□□□ 1.5
CCDC78-214ENST00000485091 SETD1AO15047 1707 aaKnown RBP24.39■■□□□ 1.5
CCDC78-214ENST00000485091 METP08581 1390 aa24.39■■□□□ 1.5
CCDC78-214ENST00000485091 YTHDC2Q9H6S0 1430 aaKnown RBP24.39■■□□□ 1.49
CCDC78-214ENST00000485091 DDX10Q13206 875 aaKnown RBP24.38■■□□□ 1.49
CCDC78-214ENST00000485091 TESK2Q96S53 571 aa24.38■■□□□ 1.49
CCDC78-214ENST00000485091 KIF7Q2M1P5 1343 aa24.37■■□□□ 1.49
CCDC78-214ENST00000485091 NCKAP5LQ9HCH0 1330 aa24.37■■□□□ 1.49
CCDC78-214ENST00000485091 CCDC7Q96M83 1385 aa24.37■■□□□ 1.49
CCDC78-214ENST00000485091 CENPJQ9HC77 1338 aaPredicted RBP24.35■■□□□ 1.49
CCDC78-214ENST00000485091 SAFB2Q14151 953 aaKnown RBP eCLIP24.35■■□□□ 1.49
CCDC78-214ENST00000485091 LRPPRCP42704 1394 aaKnown RBP24.33■■□□□ 1.49
CCDC78-214ENST00000485091 TMF1P82094 1093 aa24.32■■□□□ 1.48
CCDC78-214ENST00000485091 ARHGEF28Q8N1W1 1705 aaKnown RBP24.32■■□□□ 1.48
CCDC78-214ENST00000485091 TBX22Q9Y458 520 aa24.32■■□□□ 1.48
CCDC78-214ENST00000485091 MED14O60244 1454 aa24.31■■□□□ 1.48
CCDC78-214ENST00000485091 DISP3Q9P2K9 1392 aa24.31■■□□□ 1.48
CCDC78-214ENST00000485091 POGKQ9P215 609 aa24.31■■□□□ 1.48
CCDC78-214ENST00000485091 PRAM1Q96QH2 718 aa24.3■■□□□ 1.48
CCDC78-214ENST00000485091 NPHP4O75161 1426 aaPredicted RBP24.29■■□□□ 1.48
CCDC78-214ENST00000485091 POLR1AO95602 1720 aaPredicted RBP24.29■■□□□ 1.48
CCDC78-214ENST00000485091 QRICH2Q9H0J4 1663 aa24.28■■□□□ 1.48
CCDC78-214ENST00000485091 ABCC11Q96J66 1382 aa24.28■■□□□ 1.48
CCDC78-214ENST00000485091 WAPLQ7Z5K2 1190 aa24.27■■□□□ 1.48
CCDC78-214ENST00000485091 DIP2AQ14689 1571 aa24.27■■□□□ 1.48
CCDC78-214ENST00000485091 PTPRUQ92729 1446 aa24.26■■□□□ 1.47
CCDC78-214ENST00000485091 AMOTL2Q9Y2J4 779 aa24.25■■□□□ 1.47
CCDC78-214ENST00000485091 MINK1Q8N4C8 1332 aaPredicted RBP24.24■■□□□ 1.47
CCDC78-214ENST00000485091 PLEKHH1Q9ULM0 1364 aa24.23■■□□□ 1.47
CCDC78-214ENST00000485091 DLC1Q96QB1 1528 aa24.23■■□□□ 1.47
CCDC78-214ENST00000485091 SBNO2Q9Y2G9 1366 aa24.21■■□□□ 1.47
CCDC78-214ENST00000485091 SLC24A1O60721 1099 aa24.21■■□□□ 1.47
CCDC78-214ENST00000485091 DMRT2Q9Y5R5 561 aa24.21■■□□□ 1.47
CCDC78-214ENST00000485091 KNDC1Q76NI1 1749 aa24.2■■□□□ 1.46
CCDC78-214ENST00000485091 ROBO2Q9HCK4 1378 aa24.2■■□□□ 1.46
CCDC78-214ENST00000485091 CDCA8Q53HL2 280 aa24.19■■□□□ 1.46
CCDC78-214ENST00000485091 STRCQ7RTU9 1775 aa24.19■■□□□ 1.46
CCDC78-214ENST00000485091 TECPR2O15040 1411 aa24.18■■□□□ 1.46
CCDC78-214ENST00000485091 CPS1P31327 1500 aa24.18■■□□□ 1.46
CCDC78-214ENST00000485091 SIRT1Q96EB6 747 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 384.6 ms