RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 CDHR5Q9HBB8 845 aa11.63□□□□□ -0.55
VPS8-223ENST00000485024 BLOC1S3Q6QNY0 202 aa11.62□□□□□ -0.55
VPS8-223ENST00000485024 ANKLE1Q8NAG6 615 aa11.62□□□□□ -0.55
VPS8-223ENST00000485024 NECTIN2Q92692 538 aa11.62□□□□□ -0.55
VPS8-223ENST00000485024 SLF2Q8IX21 1173 aa11.61□□□□□ -0.55
VPS8-223ENST00000485024 DACH1Q9UI36 760 aa11.6□□□□□ -0.55
VPS8-223ENST00000485024 PCDHB3Q9Y5E6 796 aa11.6□□□□□ -0.55
VPS8-223ENST00000485024 LOC100996750A0A140TA64 210 aa11.58□□□□□ -0.56
VPS8-223ENST00000485024 S1PR4O95977 384 aa11.58□□□□□ -0.56
VPS8-223ENST00000485024 KRTAP4-6Q9BYQ5 205 aa11.58□□□□□ -0.56
VPS8-223ENST00000485024 RBM27Q9P2N5 1060 aaKnown RBP11.58□□□□□ -0.56
VPS8-223ENST00000485024 NFX1Q12986 1120 aaKnown RBP11.57□□□□□ -0.56
VPS8-223ENST00000485024 WIPF1O43516 503 aa11.56□□□□□ -0.56
VPS8-223ENST00000485024 TTC13Q8NBP0 860 aa11.56□□□□□ -0.56
VPS8-223ENST00000485024 PLA2G2CQ5R387 149 aa11.54□□□□□ -0.56
VPS8-223ENST00000485024 LCE2CQ5TA81 110 aa11.54□□□□□ -0.56
VPS8-223ENST00000485024 SPDYE16A6NNV3 312 aaPredicted RBP11.53□□□□□ -0.56
VPS8-223ENST00000485024 CRIPAKQ8N1N5 446 aa11.53□□□□□ -0.56
VPS8-223ENST00000485024 GMPR2Q9P2T1 348 aaKnown RBP11.53□□□□□ -0.56
VPS8-223ENST00000485024 PKD2L1Q9P0L9 805 aa11.52□□□□□ -0.57
VPS8-223ENST00000485024 GRXCR2A6NFK2 248 aa11.51□□□□□ -0.57
VPS8-223ENST00000485024 PADI6Q6TGC4 694 aa11.51□□□□□ -0.57
VPS8-223ENST00000485024 PRR14Q9BWN1 585 aa11.51□□□□□ -0.57
VPS8-223ENST00000485024 INSM1Q01101 510 aaPredicted RBP11.5□□□□□ -0.57
VPS8-223ENST00000485024 C11orf95C9JLR9 678 aaPredicted RBP11.48□□□□□ -0.57
VPS8-223ENST00000485024 OSBPP22059 807 aa11.48□□□□□ -0.57
VPS8-223ENST00000485024 EYA1Q99502 592 aa11.47□□□□□ -0.57
VPS8-223ENST00000485024 AVPP01185 164 aa11.46□□□□□ -0.57
VPS8-223ENST00000485024 FOXC1Q12948 553 aa11.46□□□□□ -0.57
VPS8-223ENST00000485024 NPDC1Q9NQX5 325 aaPredicted RBP11.46□□□□□ -0.57
VPS8-223ENST00000485024 SLC4A3P48751 1232 aa11.44□□□□□ -0.58
VPS8-223ENST00000485024 ADH1BP00325 375 aa11.43□□□□□ -0.58
VPS8-223ENST00000485024 AXIN1O15169 862 aa11.42□□□□□ -0.58
VPS8-223ENST00000485024 LMOD2Q6P5Q4 547 aa11.41□□□□□ -0.58
VPS8-223ENST00000485024 TOR4AQ9NXH8 423 aa11.41□□□□□ -0.58
VPS8-223ENST00000485024 ACTN4O43707 911 aaKnown RBP11.4□□□□□ -0.58
VPS8-223ENST00000485024 SLC6A16Q9GZN6 736 aa11.39□□□□□ -0.59
VPS8-223ENST00000485024 SMCPP49901 116 aaPredicted RBP11.36□□□□□ -0.59
VPS8-223ENST00000485024 CTC1Q2NKJ3 1217 aa11.36□□□□□ -0.59
VPS8-223ENST00000485024 TERTO14746 1132 aaKnown RBP11.34□□□□□ -0.59
VPS8-223ENST00000485024 CFHP08603 1231 aa11.34□□□□□ -0.59
VPS8-223ENST00000485024 SNRPBP14678 240 aaKnown RBP11.34□□□□□ -0.59
VPS8-223ENST00000485024 KMT5BQ4FZB7 885 aa11.34□□□□□ -0.59
VPS8-223ENST00000485024 ARIH1Q9Y4X5 557 aaPredicted RBP11.34□□□□□ -0.59
VPS8-223ENST00000485024 DNAJB2P25686 324 aa11.32□□□□□ -0.6
VPS8-223ENST00000485024 TMEM134Q9H6X4 195 aa11.32□□□□□ -0.6
VPS8-223ENST00000485024 CYP4X1Q8N118 509 aa11.31□□□□□ -0.6
VPS8-223ENST00000485024 NR1I2O75469 434 aa11.3□□□□□ -0.6
VPS8-223ENST00000485024 RPIAP49247 311 aa11.28□□□□□ -0.6
VPS8-223ENST00000485024 E2F4Q16254 413 aa11.28□□□□□ -0.6
VPS8-223ENST00000485024 ATP13A2Q9NQ11 1180 aa11.28□□□□□ -0.6
VPS8-223ENST00000485024 SLC10A3P09131 477 aa11.27□□□□□ -0.61
VPS8-223ENST00000485024 SCUBE3Q8IX30 993 aa11.26□□□□□ -0.61
VPS8-223ENST00000485024 LORP23490 312 aaPredicted RBP11.25□□□□□ -0.61
VPS8-223ENST00000485024 TRIM47Q96LD4 638 aa11.24□□□□□ -0.61
VPS8-223ENST00000485024 SPSB2Q99619 263 aa11.23□□□□□ -0.61
VPS8-223ENST00000485024 PUS10Q3MIT2 529 aaKnown RBP11.22□□□□□ -0.61
VPS8-223ENST00000485024 FCF1Q9Y324 198 aaKnown RBP11.22□□□□□ -0.61
VPS8-223ENST00000485024 RCCD1A6NED2 376 aa11.21□□□□□ -0.61
VPS8-223ENST00000485024 DCAF8L2P0C7V8 631 aa11.21□□□□□ -0.61
VPS8-223ENST00000485024 ADGRG1Q9Y653 693 aa11.21□□□□□ -0.61
VPS8-223ENST00000485024 CD2BP2O95400 341 aaKnown RBP11.2□□□□□ -0.62
VPS8-223ENST00000485024 SMPD1P17405 629 aa11.2□□□□□ -0.62
VPS8-223ENST00000485024 RBM46Q8TBY0 533 aaKnown RBP11.2□□□□□ -0.62
VPS8-223ENST00000485024 TTC24A2A3L6 582 aaPredicted RBP11.19□□□□□ -0.62
VPS8-223ENST00000485024 FAM181BA6NEQ2 426 aa11.19□□□□□ -0.62
VPS8-223ENST00000485024 SUZ12Q15022 739 aaKnown RBP11.18□□□□□ -0.62
VPS8-223ENST00000485024 FAM161AQ3B820 660 aa11.18□□□□□ -0.62
VPS8-223ENST00000485024 SENP2Q9HC62 589 aa11.17□□□□□ -0.62
VPS8-223ENST00000485024 GMPRP36959 345 aa11.15□□□□□ -0.62
VPS8-223ENST00000485024 ZSCAN1Q8NBB4 408 aa11.15□□□□□ -0.62
VPS8-223ENST00000485024 PTGDRQ13258 359 aa11.13□□□□□ -0.63
VPS8-223ENST00000485024 J3QL48 77 aa11.12□□□□□ -0.63
VPS8-223ENST00000485024 THAP11Q96EK4 314 aa11.12□□□□□ -0.63
VPS8-223ENST00000485024 FAM160A2Q8N612 972 aaPredicted RBP11.11□□□□□ -0.63
VPS8-223ENST00000485024 SNIP1Q8TAD8 396 aaKnown RBP11.11□□□□□ -0.63
VPS8-223ENST00000485024 PRDM9Q9NQV7 894 aa11.11□□□□□ -0.63
VPS8-223ENST00000485024 WNT7AO00755 349 aa11.1□□□□□ -0.63
VPS8-223ENST00000485024 HPS1Q92902 700 aa11.09□□□□□ -0.63
VPS8-223ENST00000485024 KIFC2Q96AC6 838 aa11.09□□□□□ -0.63
VPS8-223ENST00000485024 SLC16A10Q8TF71 515 aa11.08□□□□□ -0.64
VPS8-223ENST00000485024 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.06□□□□□ -0.64
VPS8-223ENST00000485024 MORN1Q5T089 497 aa11.06□□□□□ -0.64
VPS8-223ENST00000485024 MRGPRX2Q96LB1 330 aa11.06□□□□□ -0.64
VPS8-223ENST00000485024 NXF1Q9UBU9 619 aaKnown RBP11.06□□□□□ -0.64
VPS8-223ENST00000485024 MLLT3P42568 568 aaPredicted RBP11.05□□□□□ -0.64
VPS8-223ENST00000485024 WDR70Q9NW82 654 aa11.03□□□□□ -0.64
VPS8-223ENST00000485024 ZBTB24O43167 697 aaPredicted RBP11.02□□□□□ -0.65
VPS8-223ENST00000485024 VEGFBP49765 207 aa11.02□□□□□ -0.65
VPS8-223ENST00000485024 TRIM32Q13049 653 aa11.01□□□□□ -0.65
VPS8-223ENST00000485024 IRF7Q92985 503 aa11.01□□□□□ -0.65
VPS8-223ENST00000485024 ERBB4Q15303 1308 aa11.01□□□□□ -0.65
VPS8-223ENST00000485024 FMNL1O95466 1100 aaPredicted RBP11□□□□□ -0.65
VPS8-223ENST00000485024 SLC27A5Q9Y2P5 690 aa11□□□□□ -0.65
VPS8-223ENST00000485024 FUT2Q10981 343 aa10.99□□□□□ -0.65
VPS8-223ENST00000485024 PXYLP1Q8TE99 480 aa10.99□□□□□ -0.65
VPS8-223ENST00000485024 H3BM21 787 aa10.97□□□□□ -0.65
VPS8-223ENST00000485024 NPAS3Q8IXF0 933 aa10.97□□□□□ -0.65
VPS8-223ENST00000485024 BRICD5Q6PL45 260 aa10.96□□□□□ -0.65
VPS8-223ENST00000485024 MSS51Q4VC12 460 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms