RNA–Protein interactions for RNA: ENST00000484621.1

RNF38-207, Transcript of ring finger protein 38, humanhuman

TSL 4

Gene RNF38, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-207ENST00000484621 TXNDC2Q86VQ3 553 aa26.93■■□□□ 1.9
RNF38-207ENST00000484621 RBM33Q96EV2 1170 aaKnown RBP26.93■■□□□ 1.9
RNF38-207ENST00000484621 FAM135BQ49AJ0 1406 aa26.92■■□□□ 1.9
RNF38-207ENST00000484621 IDI1Q13907 227 aa26.91■■□□□ 1.9
RNF38-207ENST00000484621 HFM1A2PYH4 1435 aa26.9■■□□□ 1.9
RNF38-207ENST00000484621 TMEM94Q12767 1356 aa26.89■■□□□ 1.9
RNF38-207ENST00000484621 KDM5AP29375 1690 aaKnown RBP26.89■■□□□ 1.89
RNF38-207ENST00000484621 SLC52A1Q9NWF4 448 aa26.88■■□□□ 1.89
RNF38-207ENST00000484621 ADGRB3O60242 1522 aa26.84■■□□□ 1.89
RNF38-207ENST00000484621 EID1Q9Y6B2 187 aa26.83■■□□□ 1.89
RNF38-207ENST00000484621 MYO5BQ9ULV0 1848 aa26.82■■□□□ 1.88
RNF38-207ENST00000484621 TRIM52Q96A61 297 aa26.82■■□□□ 1.88
RNF38-207ENST00000484621 TMEM2Q9UHN6 1383 aa26.81■■□□□ 1.88
RNF38-207ENST00000484621 SPHKAPQ2M3C7 1700 aa26.79■■□□□ 1.88
RNF38-207ENST00000484621 PHLPP1O60346 1717 aa26.77■■□□□ 1.88
RNF38-207ENST00000484621 CHGAP10645 457 aaKnown RBP26.77■■□□□ 1.88
RNF38-207ENST00000484621 SLC26A8Q96RN1 970 aa26.77■■□□□ 1.88
RNF38-207ENST00000484621 NWD1Q149M9 1564 aa26.76■■□□□ 1.87
RNF38-207ENST00000484621 TMEM131LA2VDJ0 1609 aa26.75■■□□□ 1.87
RNF38-207ENST00000484621 LRP6O75581 1613 aa26.74■■□□□ 1.87
RNF38-207ENST00000484621 KCNA6P17658 529 aa26.73■■□□□ 1.87
RNF38-207ENST00000484621 PROSER2Q86WR7 435 aaPredicted RBP26.73■■□□□ 1.87
RNF38-207ENST00000484621 COL16A1Q07092 1604 aaPredicted RBP26.72■■□□□ 1.87
RNF38-207ENST00000484621 SLC4A1APQ9BWU0 796 aaKnown RBP26.69■■□□□ 1.86
RNF38-207ENST00000484621 NKTRP30414 1462 aaKnown RBP26.68■■□□□ 1.86
RNF38-207ENST00000484621 RIMS2Q9UQ26 1411 aa26.66■■□□□ 1.86
RNF38-207ENST00000484621 HDGFP51858 240 aaKnown RBP26.66■■□□□ 1.86
RNF38-207ENST00000484621 PPP1R15AO75807 674 aaPredicted RBP26.65■■□□□ 1.86
RNF38-207ENST00000484621 BCANQ96GW7 911 aa26.65■■□□□ 1.86
RNF38-207ENST00000484621 ZFYVE9O95405 1425 aa26.65■■□□□ 1.86
RNF38-207ENST00000484621 JCADQ9P266 1359 aa26.64■■□□□ 1.86
RNF38-207ENST00000484621 SETD5Q9C0A6 1442 aa26.64■■□□□ 1.85
RNF38-207ENST00000484621 UPF1Q92900 1129 aaKnown RBP eCLIP26.63■■□□□ 1.85
RNF38-207ENST00000484621 TRPM2O94759 1503 aa26.63■■□□□ 1.85
RNF38-207ENST00000484621 CLTCL1P53675 1640 aa26.62■■□□□ 1.85
RNF38-207ENST00000484621 KIF1BO60333 1816 aa26.61■■□□□ 1.85
RNF38-207ENST00000484621 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.61■■□□□ 1.85
RNF38-207ENST00000484621 SLAIN2Q9P270 581 aa26.61■■□□□ 1.85
RNF38-207ENST00000484621 MSH6P52701 1360 aa26.6■■□□□ 1.85
RNF38-207ENST00000484621 CHD2O14647 1828 aaKnown RBP26.59■■□□□ 1.85
RNF38-207ENST00000484621 NUTM2DQ5VT03 806 aaPredicted RBP26.58■■□□□ 1.85
RNF38-207ENST00000484621 PLEKHG1Q9ULL1 1385 aa26.58■■□□□ 1.84
RNF38-207ENST00000484621 ZNF326Q5BKZ1 582 aaKnown RBP26.57■■□□□ 1.84
RNF38-207ENST00000484621 ACIN1Q9UKV3 1341 aaKnown RBP26.57■■□□□ 1.84
RNF38-207ENST00000484621 MPHOSPH9Q99550 1183 aa26.56■■□□□ 1.84
RNF38-207ENST00000484621 FOXD1Q16676 465 aa26.55■■□□□ 1.84
RNF38-207ENST00000484621 RAB3GAP2Q9H2M9 1393 aa26.54■■□□□ 1.84
RNF38-207ENST00000484621 SHPRHQ149N8 1683 aa26.51■■□□□ 1.83
RNF38-207ENST00000484621 AHDC1Q5TGY3 1603 aaPredicted RBP26.5■■□□□ 1.83
RNF38-207ENST00000484621 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.49■■□□□ 1.83
RNF38-207ENST00000484621 DIP2AQ14689 1571 aa26.48■■□□□ 1.83
RNF38-207ENST00000484621 MEX3CQ5U5Q3 659 aaKnown RBP26.46■■□□□ 1.83
RNF38-207ENST00000484621 SPATA31A6Q5VVP1 1343 aa26.45■■□□□ 1.83
RNF38-207ENST00000484621 TBX22Q9Y458 520 aa26.45■■□□□ 1.82
RNF38-207ENST00000484621 CCDC144AA2RUR9 1427 aa26.44■■□□□ 1.82
RNF38-207ENST00000484621 NEXMIFQ5QGS0 1516 aa26.44■■□□□ 1.82
RNF38-207ENST00000484621 ADAMTS13Q76LX8 1427 aa26.43■■□□□ 1.82
RNF38-207ENST00000484621 ZNF772Q68DY9 489 aaPredicted RBP26.42■■□□□ 1.82
RNF38-207ENST00000484621 SETBP1Q9Y6X0 1596 aa26.38■■□□□ 1.81
RNF38-207ENST00000484621 NUTM2BA6NNL0 878 aaPredicted RBP26.38■■□□□ 1.81
RNF38-207ENST00000484621 NUTM2EB1AL46 878 aaPredicted RBP26.38■■□□□ 1.81
RNF38-207ENST00000484621 NUTM2AQ8IVF1 878 aaPredicted RBP26.38■■□□□ 1.81
RNF38-207ENST00000484621 NRXN3Q9Y4C0 1643 aa26.38■■□□□ 1.81
RNF38-207ENST00000484621 PPLO60437 1756 aa26.37■■□□□ 1.81
RNF38-207ENST00000484621 RXRBP28702 533 aa26.36■■□□□ 1.81
RNF38-207ENST00000484621 C14orf37Q86TY3 774 aa26.36■■□□□ 1.81
RNF38-207ENST00000484621 RPGRIP1LQ68CZ1 1315 aa26.36■■□□□ 1.81
RNF38-207ENST00000484621 PIK3R4Q99570 1358 aa26.35■■□□□ 1.81
RNF38-207ENST00000484621 RGS12O14924 1447 aa26.35■■□□□ 1.81
RNF38-207ENST00000484621 VGFO15240 615 aaPredicted RBP26.35■■□□□ 1.81
RNF38-207ENST00000484621 HRCP23327 699 aa26.35■■□□□ 1.81
RNF38-207ENST00000484621 PTPRUQ92729 1446 aa26.35■■□□□ 1.81
RNF38-207ENST00000484621 BRINP3Q76B58 766 aa26.34■■□□□ 1.81
RNF38-207ENST00000484621 CDK12Q9NYV4 1490 aaPredicted RBP26.34■■□□□ 1.81
RNF38-207ENST00000484621 AFF2P51816 1311 aa26.34■■□□□ 1.81
RNF38-207ENST00000484621 NCOA3Q9Y6Q9 1424 aa26.33■■□□□ 1.81
RNF38-207ENST00000484621 RGL3Q3MIN7 710 aa26.33■■□□□ 1.81
RNF38-207ENST00000484621 ASXL1Q8IXJ9 1541 aa26.31■■□□□ 1.8
RNF38-207ENST00000484621 AMOTL2Q9Y2J4 779 aa26.29■■□□□ 1.8
RNF38-207ENST00000484621 SPATA31E1Q6ZUB1 1445 aa26.29■■□□□ 1.8
RNF38-207ENST00000484621 NHSL1Q5SYE7 1610 aa26.28■■□□□ 1.8
RNF38-207ENST00000484621 CADPS2Q86UW7 1296 aa26.28■■□□□ 1.8
RNF38-207ENST00000484621 C19orf44Q9H6X5 657 aa26.28■■□□□ 1.8
RNF38-207ENST00000484621 ATF3P18847 181 aa26.27■■□□□ 1.8
RNF38-207ENST00000484621 DDX17Q92841 729 aaKnown RBP26.26■■□□□ 1.79
RNF38-207ENST00000484621 IFT172Q9UG01 1749 aa26.25■■□□□ 1.79
RNF38-207ENST00000484621 METP08581 1390 aa26.25■■□□□ 1.79
RNF38-207ENST00000484621 XRN1Q8IZH2 1706 aaKnown RBP26.24■■□□□ 1.79
RNF38-207ENST00000484621 MST1RQ04912 1400 aa26.23■■□□□ 1.79
RNF38-207ENST00000484621 ANKRD30BQ9BXX2 1392 aa26.22■■□□□ 1.79
RNF38-207ENST00000484621 C8orf37Q96NL8 207 aa26.2■■□□□ 1.78
RNF38-207ENST00000484621 ADGRF5Q8IZF2 1346 aa26.19■■□□□ 1.78
RNF38-207ENST00000484621 PNPLA6Q8IY17 1366 aa26.19■■□□□ 1.78
RNF38-207ENST00000484621 SRCAPQ6ZRS2 3230 aa26.17■■□□□ 1.78
RNF38-207ENST00000484621 QTRT2Q9H974 415 aaKnown RBP26.16■■□□□ 1.78
RNF38-207ENST00000484621 DCCP43146 1447 aa26.15■■□□□ 1.78
RNF38-207ENST00000484621 NALCNQ8IZF0 1738 aa26.14■■□□□ 1.78
RNF38-207ENST00000484621 RBM6P78332 1123 aaKnown RBP26.13■■□□□ 1.77
RNF38-207ENST00000484621 PIK3C2GO75747 1445 aa26.1■■□□□ 1.77
RNF38-207ENST00000484621 ADAMTS2O95450 1211 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms