RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 RIMS2Q9UQ26 1411 aa18.08■□□□□ 0.49
SNRNP200-206ENST00000484372 PROSER2Q86WR7 435 aaPredicted RBP18.08■□□□□ 0.48
SNRNP200-206ENST00000484372 PLEKHG1Q9ULL1 1385 aa18.07■□□□□ 0.48
SNRNP200-206ENST00000484372 RRBP1Q9P2E9 1410 aaKnown RBP18.06■□□□□ 0.48
SNRNP200-206ENST00000484372 ZFYVE9O95405 1425 aa18.06■□□□□ 0.48
SNRNP200-206ENST00000484372 E9PCH4 1651 aa18.06■□□□□ 0.48
SNRNP200-206ENST00000484372 TMEM94Q12767 1356 aa18.05■□□□□ 0.48
SNRNP200-206ENST00000484372 ILDR2Q71H61 639 aa18.05■□□□□ 0.48
SNRNP200-206ENST00000484372 TMEM131LA2VDJ0 1609 aa18.04■□□□□ 0.48
SNRNP200-206ENST00000484372 SENP3Q9H4L4 574 aaPredicted RBP18.03■□□□□ 0.48
SNRNP200-206ENST00000484372 TBX22Q9Y458 520 aa18.03■□□□□ 0.48
SNRNP200-206ENST00000484372 NKTRP30414 1462 aaKnown RBP18.02■□□□□ 0.48
SNRNP200-206ENST00000484372 ALKQ9UM73 1620 aa18.02■□□□□ 0.48
SNRNP200-206ENST00000484372 SOCS7O14512 581 aa18.01■□□□□ 0.47
SNRNP200-206ENST00000484372 MYO5BQ9ULV0 1848 aa18■□□□□ 0.47
SNRNP200-206ENST00000484372 NUTM2DQ5VT03 806 aaPredicted RBP18■□□□□ 0.47
SNRNP200-206ENST00000484372 MSH6P52701 1360 aa18■□□□□ 0.47
SNRNP200-206ENST00000484372 PHF23Q9BUL5 403 aaPredicted RBP17.99■□□□□ 0.47
SNRNP200-206ENST00000484372 ZNF326Q5BKZ1 582 aaKnown RBP17.98■□□□□ 0.47
SNRNP200-206ENST00000484372 TRIM52Q96A61 297 aa17.98■□□□□ 0.47
SNRNP200-206ENST00000484372 NWD1Q149M9 1564 aa17.98■□□□□ 0.47
SNRNP200-206ENST00000484372 FAM135BQ49AJ0 1406 aa17.98■□□□□ 0.47
SNRNP200-206ENST00000484372 RBM33Q96EV2 1170 aaKnown RBP17.97■□□□□ 0.47
SNRNP200-206ENST00000484372 XIRP1Q702N8 1843 aaKnown RBP17.97■□□□□ 0.47
SNRNP200-206ENST00000484372 NAIPQ13075 1403 aa17.97■□□□□ 0.47
SNRNP200-206ENST00000484372 PIK3R4Q99570 1358 aa17.96■□□□□ 0.47
SNRNP200-206ENST00000484372 C14orf37Q86TY3 774 aa17.96■□□□□ 0.47
SNRNP200-206ENST00000484372 MED1Q15648 1581 aaPredicted RBP17.96■□□□□ 0.46
SNRNP200-206ENST00000484372 DIP2AQ14689 1571 aa17.95■□□□□ 0.46
SNRNP200-206ENST00000484372 SPHKAPQ2M3C7 1700 aa17.94■□□□□ 0.46
SNRNP200-206ENST00000484372 CHD2O14647 1828 aaKnown RBP17.93■□□□□ 0.46
SNRNP200-206ENST00000484372 HFM1A2PYH4 1435 aa17.93■□□□□ 0.46
SNRNP200-206ENST00000484372 ADAMTS13Q76LX8 1427 aa17.93■□□□□ 0.46
SNRNP200-206ENST00000484372 NCOA3Q9Y6Q9 1424 aa17.93■□□□□ 0.46
SNRNP200-206ENST00000484372 SLAIN2Q9P270 581 aa17.92■□□□□ 0.46
SNRNP200-206ENST00000484372 SLC4A1APQ9BWU0 796 aaKnown RBP17.91■□□□□ 0.46
SNRNP200-206ENST00000484372 TRPM2O94759 1503 aa17.91■□□□□ 0.46
SNRNP200-206ENST00000484372 AMOTL2Q9Y2J4 779 aa17.9■□□□□ 0.46
SNRNP200-206ENST00000484372 ATF3P18847 181 aa17.89■□□□□ 0.45
SNRNP200-206ENST00000484372 CADPS2Q86UW7 1296 aa17.89■□□□□ 0.45
SNRNP200-206ENST00000484372 C19orf44Q9H6X5 657 aa17.89■□□□□ 0.45
SNRNP200-206ENST00000484372 ROBO1Q9Y6N7 1651 aa17.87■□□□□ 0.45
SNRNP200-206ENST00000484372 VGFO15240 615 aaPredicted RBP17.85■□□□□ 0.45
SNRNP200-206ENST00000484372 SETBP1Q9Y6X0 1596 aa17.84■□□□□ 0.45
SNRNP200-206ENST00000484372 ACIN1Q9UKV3 1341 aaKnown RBP17.84■□□□□ 0.45
SNRNP200-206ENST00000484372 CLTCL1P53675 1640 aa17.83■□□□□ 0.45
SNRNP200-206ENST00000484372 RPGRIP1LQ68CZ1 1315 aa17.83■□□□□ 0.44
SNRNP200-206ENST00000484372 KIF1BO60333 1816 aa17.83■□□□□ 0.44
SNRNP200-206ENST00000484372 PTPRUQ92729 1446 aa17.81■□□□□ 0.44
SNRNP200-206ENST00000484372 JCADQ9P266 1359 aa17.79■□□□□ 0.44
SNRNP200-206ENST00000484372 NEXMIFQ5QGS0 1516 aa17.79■□□□□ 0.44
SNRNP200-206ENST00000484372 METP08581 1390 aa17.79■□□□□ 0.44
SNRNP200-206ENST00000484372 NRXN3Q9Y4C0 1643 aa17.78■□□□□ 0.44
SNRNP200-206ENST00000484372 DCCP43146 1447 aa17.78■□□□□ 0.44
SNRNP200-206ENST00000484372 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.78■□□□□ 0.44
SNRNP200-206ENST00000484372 PHLPP1O60346 1717 aa17.77■□□□□ 0.44
SNRNP200-206ENST00000484372 CCDC144AA2RUR9 1427 aa17.75■□□□□ 0.43
SNRNP200-206ENST00000484372 MPHOSPH9Q99550 1183 aa17.75■□□□□ 0.43
SNRNP200-206ENST00000484372 XRN1Q8IZH2 1706 aaKnown RBP17.75■□□□□ 0.43
SNRNP200-206ENST00000484372 FOXD1Q16676 465 aa17.74■□□□□ 0.43
SNRNP200-206ENST00000484372 BRINP3Q76B58 766 aa17.72■□□□□ 0.43
SNRNP200-206ENST00000484372 SPATA31A6Q5VVP1 1343 aa17.72■□□□□ 0.43
SNRNP200-206ENST00000484372 RGS17Q9UGC6 210 aaPredicted RBP17.71■□□□□ 0.43
SNRNP200-206ENST00000484372 ADGRL3Q9HAR2 1447 aa17.71■□□□□ 0.43
SNRNP200-206ENST00000484372 RGL3Q3MIN7 710 aa17.7■□□□□ 0.42
SNRNP200-206ENST00000484372 MEX3CQ5U5Q3 659 aaKnown RBP17.7■□□□□ 0.42
SNRNP200-206ENST00000484372 SETD5Q9C0A6 1442 aa17.7■□□□□ 0.42
SNRNP200-206ENST00000484372 AHDC1Q5TGY3 1603 aaPredicted RBP17.69■□□□□ 0.42
SNRNP200-206ENST00000484372 PTCH1Q13635 1447 aa17.69■□□□□ 0.42
SNRNP200-206ENST00000484372 COL16A1Q07092 1604 aaPredicted RBP17.69■□□□□ 0.42
SNRNP200-206ENST00000484372 ANKRD30BQ9BXX2 1392 aa17.68■□□□□ 0.42
SNRNP200-206ENST00000484372 MST1RQ04912 1400 aa17.68■□□□□ 0.42
SNRNP200-206ENST00000484372 LRRC59Q96AG4 307 aaKnown RBP17.66■□□□□ 0.42
SNRNP200-206ENST00000484372 ASXL1Q8IXJ9 1541 aa17.66■□□□□ 0.42
SNRNP200-206ENST00000484372 PPLO60437 1756 aa17.66■□□□□ 0.42
SNRNP200-206ENST00000484372 ROBO2Q9HCK4 1378 aa17.65■□□□□ 0.42
SNRNP200-206ENST00000484372 POTEAQ6S8J7 498 aa17.64■□□□□ 0.41
SNRNP200-206ENST00000484372 ADGRF5Q8IZF2 1346 aa17.64■□□□□ 0.41
SNRNP200-206ENST00000484372 ZNF772Q68DY9 489 aaPredicted RBP17.63■□□□□ 0.41
SNRNP200-206ENST00000484372 SPATA31E1Q6ZUB1 1445 aa17.63■□□□□ 0.41
SNRNP200-206ENST00000484372 PRAG1Q86YV5 1406 aa17.63■□□□□ 0.41
SNRNP200-206ENST00000484372 NUTM2BA6NNL0 878 aaPredicted RBP17.61■□□□□ 0.41
SNRNP200-206ENST00000484372 NUTM2EB1AL46 878 aaPredicted RBP17.61■□□□□ 0.41
SNRNP200-206ENST00000484372 NUTM2AQ8IVF1 878 aaPredicted RBP17.61■□□□□ 0.41
SNRNP200-206ENST00000484372 C1orf167Q5SNV9 1468 aa17.61■□□□□ 0.41
SNRNP200-206ENST00000484372 SHPRHQ149N8 1683 aa17.61■□□□□ 0.41
SNRNP200-206ENST00000484372 SETD1AO15047 1707 aaKnown RBP17.61■□□□□ 0.41
SNRNP200-206ENST00000484372 NALCNQ8IZF0 1738 aa17.61■□□□□ 0.41
SNRNP200-206ENST00000484372 STK26Q9P289 416 aa17.6■□□□□ 0.41
SNRNP200-206ENST00000484372 RAB3GAP2Q9H2M9 1393 aa17.6■□□□□ 0.41
SNRNP200-206ENST00000484372 NHSL1Q5SYE7 1610 aa17.58■□□□□ 0.4
SNRNP200-206ENST00000484372 LRPPRCP42704 1394 aaKnown RBP17.57■□□□□ 0.4
SNRNP200-206ENST00000484372 LRP6O75581 1613 aa17.57■□□□□ 0.4
SNRNP200-206ENST00000484372 ABCC11Q96J66 1382 aa17.56■□□□□ 0.4
SNRNP200-206ENST00000484372 DDX17Q92841 729 aaKnown RBP17.56■□□□□ 0.4
SNRNP200-206ENST00000484372 ORAI2Q96SN7 254 aa17.56■□□□□ 0.4
SNRNP200-206ENST00000484372 PIK3C2GO75747 1445 aa17.55■□□□□ 0.4
SNRNP200-206ENST00000484372 ESCO1Q5FWF5 840 aa17.55■□□□□ 0.4
SNRNP200-206ENST00000484372 TMEM132EQ6IEE7 984 aa17.55■□□□□ 0.4
SNRNP200-206ENST00000484372 TECPR2O15040 1411 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms