RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 STRCQ7RTU9 1775 aa9.4□□□□□ -0.9
NCL-209ENST00000484328 TMEM2Q9UHN6 1383 aa9.4□□□□□ -0.9
NCL-209ENST00000484328 SETD1AO15047 1707 aaKnown RBP9.4□□□□□ -0.9
NCL-209ENST00000484328 LAMC1P11047 1609 aa9.4□□□□□ -0.9
NCL-209ENST00000484328 IQGAP1P46940 1657 aa9.39□□□□□ -0.91
NCL-209ENST00000484328 SETBP1Q9Y6X0 1596 aa9.39□□□□□ -0.91
NCL-209ENST00000484328 MED14O60244 1454 aa9.39□□□□□ -0.91
NCL-209ENST00000484328 CCER1Q8TC90 406 aaPredicted RBP9.38□□□□□ -0.91
NCL-209ENST00000484328 KIAA1210Q9ULL0 1709 aa9.38□□□□□ -0.91
NCL-209ENST00000484328 SCAF11Q99590 1463 aaKnown RBP9.38□□□□□ -0.91
NCL-209ENST00000484328 RIMS2Q9UQ26 1411 aa9.38□□□□□ -0.91
NCL-209ENST00000484328 DIP2AQ14689 1571 aa9.37□□□□□ -0.91
NCL-209ENST00000484328 SIN3AQ96ST3 1273 aa9.37□□□□□ -0.91
NCL-209ENST00000484328 TRPM1Q7Z4N2 1603 aa9.36□□□□□ -0.91
NCL-209ENST00000484328 THEMISQ8N1K5 641 aaPredicted RBP9.36□□□□□ -0.91
NCL-209ENST00000484328 PIK3C2GO75747 1445 aa9.36□□□□□ -0.91
NCL-209ENST00000484328 RPGRIP1LQ68CZ1 1315 aa9.35□□□□□ -0.91
NCL-209ENST00000484328 PLEKHG1Q9ULL1 1385 aa9.35□□□□□ -0.91
NCL-209ENST00000484328 PRAG1Q86YV5 1406 aa9.34□□□□□ -0.91
NCL-209ENST00000484328 ASXL1Q8IXJ9 1541 aa9.34□□□□□ -0.91
NCL-209ENST00000484328 TONSLQ96HA7 1378 aa9.34□□□□□ -0.91
NCL-209ENST00000484328 TIMELESSQ9UNS1 1208 aa9.33□□□□□ -0.92
NCL-209ENST00000484328 KNDC1Q76NI1 1749 aa9.33□□□□□ -0.92
NCL-209ENST00000484328 ADGRB1O14514 1584 aa9.33□□□□□ -0.92
NCL-209ENST00000484328 NWD1Q149M9 1564 aa9.33□□□□□ -0.92
NCL-209ENST00000484328 NPHP4O75161 1426 aaPredicted RBP9.32□□□□□ -0.92
NCL-209ENST00000484328 ADAMTS13Q76LX8 1427 aa9.32□□□□□ -0.92
NCL-209ENST00000484328 ALKQ9UM73 1620 aa9.32□□□□□ -0.92
NCL-209ENST00000484328 XRN1Q8IZH2 1706 aaKnown RBP9.32□□□□□ -0.92
NCL-209ENST00000484328 CHGAP10645 457 aaKnown RBP9.32□□□□□ -0.92
NCL-209ENST00000484328 STAC3Q96MF2 364 aa9.32□□□□□ -0.92
NCL-209ENST00000484328 STAG3Q9UJ98 1225 aa9.32□□□□□ -0.92
NCL-209ENST00000484328 ADRA2BP18089 450 aa9.31□□□□□ -0.92
NCL-209ENST00000484328 LTKP29376 864 aa9.31□□□□□ -0.92
NCL-209ENST00000484328 HSPA2P54652 639 aa9.31□□□□□ -0.92
NCL-209ENST00000484328 NEUROD1Q13562 356 aa9.31□□□□□ -0.92
NCL-209ENST00000484328 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.31□□□□□ -0.92
NCL-209ENST00000484328 L3MBTL2Q969R5 705 aa9.31□□□□□ -0.92
NCL-209ENST00000484328 RALGAPBQ86X10 1494 aa9.31□□□□□ -0.92
NCL-209ENST00000484328 RGL3Q3MIN7 710 aa9.3□□□□□ -0.92
NCL-209ENST00000484328 ZNF326Q5BKZ1 582 aaKnown RBP9.3□□□□□ -0.92
NCL-209ENST00000484328 CHD2O14647 1828 aaKnown RBP9.3□□□□□ -0.92
NCL-209ENST00000484328 ADGRF5Q8IZF2 1346 aa9.3□□□□□ -0.92
NCL-209ENST00000484328 VGFO15240 615 aaPredicted RBP9.29□□□□□ -0.92
NCL-209ENST00000484328 TXNDC2Q86VQ3 553 aa9.29□□□□□ -0.92
NCL-209ENST00000484328 ANKLE2Q86XL3 938 aa9.29□□□□□ -0.92
NCL-209ENST00000484328 EID1Q9Y6B2 187 aa9.29□□□□□ -0.92
NCL-209ENST00000484328 CPS1P31327 1500 aa9.29□□□□□ -0.92
NCL-209ENST00000484328 STRCP1A6NGW2 1772 aa9.29□□□□□ -0.92
NCL-209ENST00000484328 HDGFP51858 240 aaKnown RBP9.28□□□□□ -0.92
NCL-209ENST00000484328 DCAF11Q8TEB1 546 aa9.28□□□□□ -0.92
NCL-209ENST00000484328 ARHGEF28Q8N1W1 1705 aaKnown RBP9.28□□□□□ -0.92
NCL-209ENST00000484328 GPRASP1Q5JY77 1395 aa9.27□□□□□ -0.93
NCL-209ENST00000484328 PIK3R4Q99570 1358 aa9.27□□□□□ -0.93
NCL-209ENST00000484328 NCKAP5LQ9HCH0 1330 aa9.27□□□□□ -0.93
NCL-209ENST00000484328 TECPR2O15040 1411 aa9.26□□□□□ -0.93
NCL-209ENST00000484328 PPP1R15AO75807 674 aaPredicted RBP9.26□□□□□ -0.93
NCL-209ENST00000484328 NUTM2DQ5VT03 806 aaPredicted RBP9.26□□□□□ -0.93
NCL-209ENST00000484328 NKTRP30414 1462 aaKnown RBP9.26□□□□□ -0.93
NCL-209ENST00000484328 DLC1Q96QB1 1528 aa9.26□□□□□ -0.93
NCL-209ENST00000484328 C14orf93Q9H972 538 aaKnown RBP9.25□□□□□ -0.93
NCL-209ENST00000484328 METP08581 1390 aa9.24□□□□□ -0.93
NCL-209ENST00000484328 PTCH1Q13635 1447 aa9.24□□□□□ -0.93
NCL-209ENST00000484328 PTPRUQ92729 1446 aa9.24□□□□□ -0.93
NCL-209ENST00000484328 NBPF8Q3BBV2 869 aa9.24□□□□□ -0.93
NCL-209ENST00000484328 TBX22Q9Y458 520 aa9.24□□□□□ -0.93
NCL-209ENST00000484328 XIRP1Q702N8 1843 aaKnown RBP9.24□□□□□ -0.93
NCL-209ENST00000484328 YTHDC2Q9H6S0 1430 aaKnown RBP9.23□□□□□ -0.93
NCL-209ENST00000484328 KDM2AQ9Y2K7 1162 aa9.23□□□□□ -0.93
NCL-209ENST00000484328 LTBP4Q8N2S1 1624 aa9.23□□□□□ -0.93
NCL-209ENST00000484328 LRPPRCP42704 1394 aaKnown RBP9.23□□□□□ -0.93
NCL-209ENST00000484328 ADGRB2O60241 1585 aa9.22□□□□□ -0.93
NCL-209ENST00000484328 CFAP70Q5T0N1 1121 aa9.22□□□□□ -0.93
NCL-209ENST00000484328 QRICH2Q9H0J4 1663 aa9.22□□□□□ -0.93
NCL-209ENST00000484328 NALCNQ8IZF0 1738 aa9.22□□□□□ -0.93
NCL-209ENST00000484328 SLC26A8Q96RN1 970 aa9.21□□□□□ -0.94
NCL-209ENST00000484328 DMRT2Q9Y5R5 561 aa9.21□□□□□ -0.94
NCL-209ENST00000484328 ROCK2O75116 1388 aaKnown RBP9.21□□□□□ -0.94
NCL-209ENST00000484328 ABCC11Q96J66 1382 aa9.21□□□□□ -0.94
NCL-209ENST00000484328 FAM135BQ49AJ0 1406 aa9.2□□□□□ -0.94
NCL-209ENST00000484328 ZEB1P37275 1124 aaPredicted RBP9.19□□□□□ -0.94
NCL-209ENST00000484328 CDC42BPGQ6DT37 1551 aa9.19□□□□□ -0.94
NCL-209ENST00000484328 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.19□□□□□ -0.94
NCL-209ENST00000484328 NBPF1Q3BBV0 1214 aa9.18□□□□□ -0.94
NCL-209ENST00000484328 LRRC7Q96NW7 1537 aa9.18□□□□□ -0.94
NCL-209ENST00000484328 ROBO2Q9HCK4 1378 aa9.18□□□□□ -0.94
NCL-209ENST00000484328 ZNF335Q9H4Z2 1342 aaPredicted RBP9.17□□□□□ -0.94
NCL-209ENST00000484328 KCNA6P17658 529 aa9.17□□□□□ -0.94
NCL-209ENST00000484328 TMEM132EQ6IEE7 984 aa9.17□□□□□ -0.94
NCL-209ENST00000484328 IQSEC2Q5JU85 1478 aa9.16□□□□□ -0.94
NCL-209ENST00000484328 NCOA3Q9Y6Q9 1424 aa9.16□□□□□ -0.94
NCL-209ENST00000484328 EIF3AQ14152 1382 aaKnown RBP9.16□□□□□ -0.94
NCL-209ENST00000484328 USP47Q96K76 1375 aa9.16□□□□□ -0.94
NCL-209ENST00000484328 SBNO2Q9Y2G9 1366 aa9.16□□□□□ -0.94
NCL-209ENST00000484328 SIRT1Q96EB6 747 aa9.16□□□□□ -0.94
NCL-209ENST00000484328 BCANQ96GW7 911 aa9.16□□□□□ -0.94
NCL-209ENST00000484328 FMN2Q9NZ56 1722 aa9.16□□□□□ -0.94
NCL-209ENST00000484328 ADGRL3Q9HAR2 1447 aa9.15□□□□□ -0.94
NCL-209ENST00000484328 AMOTL2Q9Y2J4 779 aa9.15□□□□□ -0.94
NCL-209ENST00000484328 TOPAZ1Q8N9V7 1692 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms