RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 KANK1Q14678 1352 aa10.36□□□□□ -0.75
BRCA1-216ENST00000484087 PLA2R1Q13018 1463 aa10.36□□□□□ -0.75
BRCA1-216ENST00000484087 NLRP1Q9C000 1473 aa10.36□□□□□ -0.75
BRCA1-216ENST00000484087 NAIPQ13075 1403 aa10.35□□□□□ -0.75
BRCA1-216ENST00000484087 ARHGAP31Q2M1Z3 1444 aa10.35□□□□□ -0.75
BRCA1-216ENST00000484087 ILDR1Q86SU0 546 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-216ENST00000484087 IQGAP1P46940 1657 aa10.34□□□□□ -0.75
BRCA1-216ENST00000484087 LTBP4Q8N2S1 1624 aa10.34□□□□□ -0.75
BRCA1-216ENST00000484087 HAX1O00165 279 aa10.33□□□□□ -0.76
BRCA1-216ENST00000484087 STRCP1A6NGW2 1772 aa10.33□□□□□ -0.76
BRCA1-216ENST00000484087 PTPRTO14522 1441 aa10.33□□□□□ -0.76
BRCA1-216ENST00000484087 ZNF335Q9H4Z2 1342 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-216ENST00000484087 ADGRB3O60242 1522 aa10.32□□□□□ -0.76
BRCA1-216ENST00000484087 SPHKAPQ2M3C7 1700 aa10.32□□□□□ -0.76
BRCA1-216ENST00000484087 NOS1P29475 1434 aa10.32□□□□□ -0.76
BRCA1-216ENST00000484087 NUP155O75694 1391 aa10.32□□□□□ -0.76
BRCA1-216ENST00000484087 IDI1Q13907 227 aa10.3□□□□□ -0.76
BRCA1-216ENST00000484087 HFM1A2PYH4 1435 aa10.29□□□□□ -0.76
BRCA1-216ENST00000484087 TMEM131LA2VDJ0 1609 aa10.29□□□□□ -0.76
BRCA1-216ENST00000484087 NPHP4O75161 1426 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-216ENST00000484087 REM2Q8IYK8 340 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-216ENST00000484087 CLTCL1P53675 1640 aa10.28□□□□□ -0.76
BRCA1-216ENST00000484087 RPRD2Q5VT52 1461 aaKnown RBP10.28□□□□□ -0.76
BRCA1-216ENST00000484087 LTKP29376 864 aa10.28□□□□□ -0.76
BRCA1-216ENST00000484087 CCER1Q8TC90 406 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-216ENST00000484087 CERKQ8TCT0 537 aa10.28□□□□□ -0.76
BRCA1-216ENST00000484087 SLIT1O75093 1534 aa10.28□□□□□ -0.76
BRCA1-216ENST00000484087 SCAF11Q99590 1463 aaKnown RBP10.27□□□□□ -0.76
BRCA1-216ENST00000484087 ARHGAP23Q9P227 1491 aa10.27□□□□□ -0.76
BRCA1-216ENST00000484087 KDM5AP29375 1690 aaKnown RBP10.27□□□□□ -0.77
BRCA1-216ENST00000484087 PKD2Q13563 968 aa10.27□□□□□ -0.77
BRCA1-216ENST00000484087 THEMISQ8N1K5 641 aaPredicted RBP10.27□□□□□ -0.77
BRCA1-216ENST00000484087 NUTM2DQ5VT03 806 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-216ENST00000484087 STAG3Q9UJ98 1225 aa10.26□□□□□ -0.77
BRCA1-216ENST00000484087 MED14O60244 1454 aa10.26□□□□□ -0.77
BRCA1-216ENST00000484087 CHGAP10645 457 aaKnown RBP10.25□□□□□ -0.77
BRCA1-216ENST00000484087 ANKLE2Q86XL3 938 aa10.25□□□□□ -0.77
BRCA1-216ENST00000484087 TRIM52Q96A61 297 aa10.25□□□□□ -0.77
BRCA1-216ENST00000484087 TMEM2Q9UHN6 1383 aa10.24□□□□□ -0.77
BRCA1-216ENST00000484087 XIRP1Q702N8 1843 aaKnown RBP10.24□□□□□ -0.77
BRCA1-216ENST00000484087 TXNDC2Q86VQ3 553 aa10.23□□□□□ -0.77
BRCA1-216ENST00000484087 TRPM2O94759 1503 aa10.23□□□□□ -0.77
BRCA1-216ENST00000484087 FBXO41Q8TF61 875 aa10.23□□□□□ -0.77
BRCA1-216ENST00000484087 ZFYVE9O95405 1425 aa10.22□□□□□ -0.77
BRCA1-216ENST00000484087 KIF1BO60333 1816 aa10.22□□□□□ -0.77
BRCA1-216ENST00000484087 RIMS2Q9UQ26 1411 aa10.22□□□□□ -0.77
BRCA1-216ENST00000484087 FXR2P51116 673 aaKnown RBP eCLIP10.21□□□□□ -0.78
BRCA1-216ENST00000484087 SLC26A8Q96RN1 970 aa10.21□□□□□ -0.78
BRCA1-216ENST00000484087 NRXN3Q9Y4C0 1643 aa10.2□□□□□ -0.78
BRCA1-216ENST00000484087 RAB3GAP2Q9H2M9 1393 aa10.2□□□□□ -0.78
BRCA1-216ENST00000484087 ALKQ9UM73 1620 aa10.19□□□□□ -0.78
BRCA1-216ENST00000484087 PITPNM1O00562 1244 aa10.19□□□□□ -0.78
BRCA1-216ENST00000484087 RBM33Q96EV2 1170 aaKnown RBP10.19□□□□□ -0.78
BRCA1-216ENST00000484087 SLC52A1Q9NWF4 448 aa10.19□□□□□ -0.78
BRCA1-216ENST00000484087 CPS1P31327 1500 aa10.18□□□□□ -0.78
BRCA1-216ENST00000484087 NEXMIFQ5QGS0 1516 aa10.18□□□□□ -0.78
BRCA1-216ENST00000484087 LRRC7Q96NW7 1537 aa10.18□□□□□ -0.78
BRCA1-216ENST00000484087 EID1Q9Y6B2 187 aa10.18□□□□□ -0.78
BRCA1-216ENST00000484087 SETD5Q9C0A6 1442 aa10.18□□□□□ -0.78
BRCA1-216ENST00000484087 BCANQ96GW7 911 aa10.17□□□□□ -0.78
BRCA1-216ENST00000484087 CHD2O14647 1828 aaKnown RBP10.17□□□□□ -0.78
BRCA1-216ENST00000484087 PPP1R15AO75807 674 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-216ENST00000484087 PPLO60437 1756 aa10.16□□□□□ -0.78
BRCA1-216ENST00000484087 NWD1Q149M9 1564 aa10.16□□□□□ -0.78
BRCA1-216ENST00000484087 EVX2Q03828 476 aa10.16□□□□□ -0.78
BRCA1-216ENST00000484087 ADAMTS13Q76LX8 1427 aa10.16□□□□□ -0.78
BRCA1-216ENST00000484087 UBAP1LF5GYI3 381 aa10.15□□□□□ -0.78
BRCA1-216ENST00000484087 ZNF326Q5BKZ1 582 aaKnown RBP10.15□□□□□ -0.78
BRCA1-216ENST00000484087 PLEKHG1Q9ULL1 1385 aa10.15□□□□□ -0.78
BRCA1-216ENST00000484087 IQSEC2Q5JU85 1478 aa10.15□□□□□ -0.79
BRCA1-216ENST00000484087 IFT172Q9UG01 1749 aa10.15□□□□□ -0.79
BRCA1-216ENST00000484087 SETD1AO15047 1707 aaKnown RBP10.14□□□□□ -0.79
BRCA1-216ENST00000484087 ATXN8OSP0DMR3 200 aa10.14□□□□□ -0.79
BRCA1-216ENST00000484087 AMER1Q5JTC6 1135 aaPredicted RBP10.14□□□□□ -0.79
BRCA1-216ENST00000484087 MPHOSPH9Q99550 1183 aa10.14□□□□□ -0.79
BRCA1-216ENST00000484087 PIP4K2BP78356 416 aa10.13□□□□□ -0.79
BRCA1-216ENST00000484087 SLC24A1O60721 1099 aa10.12□□□□□ -0.79
BRCA1-216ENST00000484087 SETBP1Q9Y6X0 1596 aa10.12□□□□□ -0.79
BRCA1-216ENST00000484087 PTPRUQ92729 1446 aa10.12□□□□□ -0.79
BRCA1-216ENST00000484087 CLSPNQ9HAW4 1339 aa10.11□□□□□ -0.79
BRCA1-216ENST00000484087 CCDC144AA2RUR9 1427 aa10.11□□□□□ -0.79
BRCA1-216ENST00000484087 XRN1Q8IZH2 1706 aaKnown RBP10.11□□□□□ -0.79
BRCA1-216ENST00000484087 TMEM94Q12767 1356 aa10.11□□□□□ -0.79
BRCA1-216ENST00000484087 DIP2AQ14689 1571 aa10.1□□□□□ -0.79
BRCA1-216ENST00000484087 RGL3Q3MIN7 710 aa10.1□□□□□ -0.79
BRCA1-216ENST00000484087 RTN4Q9NQC3 1192 aaKnown RBP10.1□□□□□ -0.79
BRCA1-216ENST00000484087 METP08581 1390 aa10.09□□□□□ -0.79
BRCA1-216ENST00000484087 KCNA6P17658 529 aa10.09□□□□□ -0.79
BRCA1-216ENST00000484087 NKTRP30414 1462 aaKnown RBP10.09□□□□□ -0.79
BRCA1-216ENST00000484087 SPATA31E1Q6ZUB1 1445 aa10.09□□□□□ -0.79
BRCA1-216ENST00000484087 NALCNQ8IZF0 1738 aa10.08□□□□□ -0.8
BRCA1-216ENST00000484087 ASXL1Q8IXJ9 1541 aa10.07□□□□□ -0.8
BRCA1-216ENST00000484087 ROBO1Q9Y6N7 1651 aa10.07□□□□□ -0.8
BRCA1-216ENST00000484087 PROSER2Q86WR7 435 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-216ENST00000484087 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.07□□□□□ -0.8
BRCA1-216ENST00000484087 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-216ENST00000484087 ADGRF5Q8IZF2 1346 aa10.06□□□□□ -0.8
BRCA1-216ENST00000484087 HSPA1LP34931 641 aa10.05□□□□□ -0.8
BRCA1-216ENST00000484087 DHX57Q6P158 1386 aaKnown RBP10.05□□□□□ -0.8
BRCA1-216ENST00000484087 SPDYE2BA6NHP3 402 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 250.3 ms