RNA–Protein interactions for RNA: ENST00000484077.1

RIF1-210, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-210ENST00000484077 LMOD2Q6P5Q4 547 aa11.83□□□□□ -0.52
RIF1-210ENST00000484077 HPS5Q9UPZ3 1129 aa11.83□□□□□ -0.52
RIF1-210ENST00000484077 EIF4G1Q04637 1599 aaKnown RBP11.83□□□□□ -0.52
RIF1-210ENST00000484077 PPP4CP60510 307 aa11.82□□□□□ -0.52
RIF1-210ENST00000484077 PXYLP1Q8TE99 480 aa11.82□□□□□ -0.52
RIF1-210ENST00000484077 TMEM134Q9H6X4 195 aa11.81□□□□□ -0.52
RIF1-210ENST00000484077 SWT1Q5T5J6 900 aaKnown RBP11.8□□□□□ -0.52
RIF1-210ENST00000484077 METTL3Q86U44 580 aaKnown RBP11.8□□□□□ -0.52
RIF1-210ENST00000484077 WBP1LQ9NX94 342 aa11.8□□□□□ -0.52
RIF1-210ENST00000484077 RCCD1A6NED2 376 aa11.79□□□□□ -0.52
RIF1-210ENST00000484077 FECHP22830 423 aa11.79□□□□□ -0.52
RIF1-210ENST00000484077 MAP2K5Q13163 448 aa11.79□□□□□ -0.52
RIF1-210ENST00000484077 IFFO2Q5TF58 517 aa11.79□□□□□ -0.52
RIF1-210ENST00000484077 PLA2G2EQ9NZK7 142 aa11.78□□□□□ -0.52
RIF1-210ENST00000484077 CC2D2AQ9P2K1 1620 aa11.77□□□□□ -0.53
RIF1-210ENST00000484077 MINK1Q8N4C8 1332 aaPredicted RBP11.76□□□□□ -0.53
RIF1-210ENST00000484077 FAM161AQ3B820 660 aa11.75□□□□□ -0.53
RIF1-210ENST00000484077 PRR14Q9BWN1 585 aa11.75□□□□□ -0.53
RIF1-210ENST00000484077 ITGBL1O95965 494 aaPredicted RBP11.74□□□□□ -0.53
RIF1-210ENST00000484077 RNF40O75150 1001 aa11.73□□□□□ -0.53
RIF1-210ENST00000484077 BCANQ96GW7 911 aa11.73□□□□□ -0.53
RIF1-210ENST00000484077 IRF6O14896 467 aa11.72□□□□□ -0.53
RIF1-210ENST00000484077 RSPH4AQ5TD94 716 aa11.71□□□□□ -0.53
RIF1-210ENST00000484077 DAXXQ9UER7 740 aaPredicted RBP11.71□□□□□ -0.53
RIF1-210ENST00000484077 ZMYND10O75800 440 aa11.68□□□□□ -0.54
RIF1-210ENST00000484077 BARGINQ6ZT62 677 aa11.68□□□□□ -0.54
RIF1-210ENST00000484077 ZC3H15Q8WU90 426 aaKnown RBP11.68□□□□□ -0.54
RIF1-210ENST00000484077 KMT5BQ4FZB7 885 aa11.67□□□□□ -0.54
RIF1-210ENST00000484077 KCNC4Q03721 635 aa11.66□□□□□ -0.54
RIF1-210ENST00000484077 APLP1P51693 650 aa11.65□□□□□ -0.54
RIF1-210ENST00000484077 SULF1Q8IWU6 871 aa11.65□□□□□ -0.54
RIF1-210ENST00000484077 CCDC102AQ96A19 550 aa11.64□□□□□ -0.55
RIF1-210ENST00000484077 CECR2Q9BXF3 1484 aa11.63□□□□□ -0.55
RIF1-210ENST00000484077 PHOX2BQ99453 314 aa11.63□□□□□ -0.55
RIF1-210ENST00000484077 IL21Q9HBE4 155 aa11.63□□□□□ -0.55
RIF1-210ENST00000484077 SMARCA4P51532 1647 aa11.63□□□□□ -0.55
RIF1-210ENST00000484077 KRI1Q8N9T8 703 aaKnown RBP11.62□□□□□ -0.55
RIF1-210ENST00000484077 ACTN4O43707 911 aaKnown RBP11.61□□□□□ -0.55
RIF1-210ENST00000484077 SLC10A3P09131 477 aa11.61□□□□□ -0.55
RIF1-210ENST00000484077 TJAP1Q5JTD0 557 aa11.61□□□□□ -0.55
RIF1-210ENST00000484077 CFHP08603 1231 aa11.6□□□□□ -0.55
RIF1-210ENST00000484077 MTRQ99707 1265 aa11.6□□□□□ -0.55
RIF1-210ENST00000484077 BAZ1AQ9NRL2 1556 aaPredicted RBP11.58□□□□□ -0.55
RIF1-210ENST00000484077 PCDHB3Q9Y5E6 796 aa11.58□□□□□ -0.56
RIF1-210ENST00000484077 A0A0G2JS52 829 aa11.57□□□□□ -0.56
RIF1-210ENST00000484077 RGS20O76081 388 aa11.57□□□□□ -0.56
RIF1-210ENST00000484077 CLCN1P35523 988 aa11.57□□□□□ -0.56
RIF1-210ENST00000484077 DDX11L8A8MPP1 907 aa11.56□□□□□ -0.56
RIF1-210ENST00000484077 RDH13Q8NBN7 331 aa11.56□□□□□ -0.56
RIF1-210ENST00000484077 GPCPD1Q9NPB8 672 aa11.55□□□□□ -0.56
RIF1-210ENST00000484077 NLRP7Q8WX94 980 aa11.54□□□□□ -0.56
RIF1-210ENST00000484077 GCGRP47871 477 aa11.53□□□□□ -0.56
RIF1-210ENST00000484077 MDM2Q00987 491 aaPredicted RBP11.53□□□□□ -0.56
RIF1-210ENST00000484077 AMHR2Q16671 573 aa11.53□□□□□ -0.56
RIF1-210ENST00000484077 TMUB1Q9BVT8 246 aa11.53□□□□□ -0.56
RIF1-210ENST00000484077 CD46P15529 392 aa11.52□□□□□ -0.57
RIF1-210ENST00000484077 AK7Q96M32 723 aa11.52□□□□□ -0.57
RIF1-210ENST00000484077 SMARCA2P51531 1590 aa11.52□□□□□ -0.57
RIF1-210ENST00000484077 ZPR1O75312 459 aa11.51□□□□□ -0.57
RIF1-210ENST00000484077 HMGXB3Q12766 1538 aa11.5□□□□□ -0.57
RIF1-210ENST00000484077 PEG3Q9GZU2 1588 aa11.5□□□□□ -0.57
RIF1-210ENST00000484077 NR1I2O75469 434 aa11.5□□□□□ -0.57
RIF1-210ENST00000484077 COPS2P61201 443 aa11.5□□□□□ -0.57
RIF1-210ENST00000484077 GRIPAP1Q4V328 841 aa11.49□□□□□ -0.57
RIF1-210ENST00000484077 BLOC1S3Q6QNY0 202 aa11.49□□□□□ -0.57
RIF1-210ENST00000484077 ATP6V1AP38606 617 aa11.48□□□□□ -0.57
RIF1-210ENST00000484077 ZNF516Q92618 1163 aa11.48□□□□□ -0.57
RIF1-210ENST00000484077 FAM217BQ9NTX9 383 aaPredicted RBP11.48□□□□□ -0.57
RIF1-210ENST00000484077 ATAD2BQ9ULI0 1458 aa11.48□□□□□ -0.57
RIF1-210ENST00000484077 MROH2BQ7Z745 1585 aa11.47□□□□□ -0.57
RIF1-210ENST00000484077 USP46P62068 366 aa11.46□□□□□ -0.57
RIF1-210ENST00000484077 NCAPD3P42695 1498 aa11.45□□□□□ -0.58
RIF1-210ENST00000484077 TRIM66O15016 1216 aa11.45□□□□□ -0.58
RIF1-210ENST00000484077 GGCXP38435 758 aa11.45□□□□□ -0.58
RIF1-210ENST00000484077 FUT2Q10981 343 aa11.44□□□□□ -0.58
RIF1-210ENST00000484077 TTLL12Q14166 644 aaPredicted RBP11.44□□□□□ -0.58
RIF1-210ENST00000484077 MORN1Q5T089 497 aa11.44□□□□□ -0.58
RIF1-210ENST00000484077 SALL2Q9Y467 1007 aaPredicted RBP11.43□□□□□ -0.58
RIF1-210ENST00000484077 BAZ1BQ9UIG0 1483 aaKnown RBP11.43□□□□□ -0.58
RIF1-210ENST00000484077 KDM4AO75164 1064 aa11.42□□□□□ -0.58
RIF1-210ENST00000484077 SCUBE3Q8IX30 993 aa11.42□□□□□ -0.58
RIF1-210ENST00000484077 SSTR3P32745 418 aaPredicted RBP11.41□□□□□ -0.58
RIF1-210ENST00000484077 REPIN1Q9BWE0 567 aaKnown RBP11.41□□□□□ -0.58
RIF1-210ENST00000484077 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.41□□□□□ -0.58
RIF1-210ENST00000484077 WIZO95785 1651 aa11.4□□□□□ -0.58
RIF1-210ENST00000484077 ADH1BP00325 375 aa11.4□□□□□ -0.58
RIF1-210ENST00000484077 PPP1R18Q6NYC8 613 aa11.4□□□□□ -0.58
RIF1-210ENST00000484077 SLC24A3Q9HC58 644 aa11.4□□□□□ -0.58
RIF1-210ENST00000484077 PUS10Q3MIT2 529 aaKnown RBP11.39□□□□□ -0.59
RIF1-210ENST00000484077 GIGYF2Q6Y7W6 1299 aaKnown RBP11.39□□□□□ -0.59
RIF1-210ENST00000484077 NKX2-3Q8TAU0 364 aa11.39□□□□□ -0.59
RIF1-210ENST00000484077 PARP9Q8IXQ6 854 aa11.38□□□□□ -0.59
RIF1-210ENST00000484077 Q3C1V9 767 aa11.37□□□□□ -0.59
RIF1-210ENST00000484077 FMNL1O95466 1100 aaPredicted RBP11.36□□□□□ -0.59
RIF1-210ENST00000484077 PDE4DQ08499 809 aa11.36□□□□□ -0.59
RIF1-210ENST00000484077 DIXDC1Q155Q3 683 aa11.36□□□□□ -0.59
RIF1-210ENST00000484077 NUTM1Q86Y26 1132 aa11.36□□□□□ -0.59
RIF1-210ENST00000484077 SPSB2Q99619 263 aa11.36□□□□□ -0.59
RIF1-210ENST00000484077 SLC27A5Q9Y2P5 690 aa11.36□□□□□ -0.59
RIF1-210ENST00000484077 TLL1O43897 1013 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms