RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 POTEMA6NI47 508 aa14.82□□□□□ -0.04
MCF2-207ENST00000483690 ST18O60284 1047 aa14.82□□□□□ -0.04
MCF2-207ENST00000483690 EMP3P54852 163 aa14.82□□□□□ -0.04
MCF2-207ENST00000483690 NUTM1Q86Y26 1132 aa14.81□□□□□ -0.04
MCF2-207ENST00000483690 SPIRE2Q8WWL2 714 aa14.81□□□□□ -0.04
MCF2-207ENST00000483690 RABGEF1Q9UJ41 708 aa14.81□□□□□ -0.04
MCF2-207ENST00000483690 PBX2P40425 430 aa14.8□□□□□ -0.04
MCF2-207ENST00000483690 POTEGQ6S5H5 508 aa14.8□□□□□ -0.04
MCF2-207ENST00000483690 SLC4A5Q9BY07 1137 aa14.8□□□□□ -0.04
MCF2-207ENST00000483690 RDH13Q8NBN7 331 aa14.79□□□□□ -0.04
MCF2-207ENST00000483690 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.79□□□□□ -0.04
MCF2-207ENST00000483690 AXIN2Q9Y2T1 843 aa14.78□□□□□ -0.04
MCF2-207ENST00000483690 RSPH4AQ5TD94 716 aa14.77□□□□□ -0.05
MCF2-207ENST00000483690 POTEEQ6S8J3 1075 aa14.77□□□□□ -0.05
MCF2-207ENST00000483690 MARVELD3Q96A59 401 aa14.77□□□□□ -0.05
MCF2-207ENST00000483690 DMRTA1Q5VZB9 504 aa14.76□□□□□ -0.05
MCF2-207ENST00000483690 RIC3Q7Z5B4 369 aa14.76□□□□□ -0.05
MCF2-207ENST00000483690 SEPT9Q9UHD8 586 aaPredicted RBP14.75□□□□□ -0.05
MCF2-207ENST00000483690 LIMD1Q9UGP4 676 aa14.74□□□□□ -0.05
MCF2-207ENST00000483690 FAM205CA6NFA0 338 aa14.73□□□□□ -0.05
MCF2-207ENST00000483690 HDGFP51858 240 aaKnown RBP14.73□□□□□ -0.05
MCF2-207ENST00000483690 ZNF687Q8N1G0 1237 aa14.73□□□□□ -0.05
MCF2-207ENST00000483690 MCM6Q14566 821 aa14.72□□□□□ -0.05
MCF2-207ENST00000483690 SWT1Q5T5J6 900 aaKnown RBP14.72□□□□□ -0.05
MCF2-207ENST00000483690 SPTLC1O15269 473 aa14.71□□□□□ -0.05
MCF2-207ENST00000483690 SLC4A3P48751 1232 aa14.71□□□□□ -0.05
MCF2-207ENST00000483690 FAM98CQ17RN3 349 aaKnown RBP14.71□□□□□ -0.05
MCF2-207ENST00000483690 RSBN1LQ6PCB5 846 aaPredicted RBP14.71□□□□□ -0.05
MCF2-207ENST00000483690 VPS9D1Q9Y2B5 631 aa14.71□□□□□ -0.05
MCF2-207ENST00000483690 MOXD2PA6NHM9 499 aa14.7□□□□□ -0.06
MCF2-207ENST00000483690 TUSC1Q2TAM9 212 aa14.7□□□□□ -0.06
MCF2-207ENST00000483690 KDM4AO75164 1064 aa14.69□□□□□ -0.06
MCF2-207ENST00000483690 UBTFP17480 764 aaKnown RBP14.69□□□□□ -0.06
MCF2-207ENST00000483690 GJA5P36382 358 aa14.68□□□□□ -0.06
MCF2-207ENST00000483690 RFC5P40937 340 aa14.68□□□□□ -0.06
MCF2-207ENST00000483690 NBPF3Q9H094 633 aa14.68□□□□□ -0.06
MCF2-207ENST00000483690 GCGRP47871 477 aa14.67□□□□□ -0.06
MCF2-207ENST00000483690 USP46P62068 366 aa14.67□□□□□ -0.06
MCF2-207ENST00000483690 NDUFV2P19404 249 aa14.66□□□□□ -0.06
MCF2-207ENST00000483690 CSPP1Q1MSJ5 1256 aa14.66□□□□□ -0.06
MCF2-207ENST00000483690 PPP2R2DQ66LE6 453 aa14.66□□□□□ -0.06
MCF2-207ENST00000483690 LAPTM4BQ86VI4 370 aa14.66□□□□□ -0.06
MCF2-207ENST00000483690 ARXQ96QS3 562 aa14.66□□□□□ -0.06
MCF2-207ENST00000483690 SLC10A3P09131 477 aa14.64□□□□□ -0.07
MCF2-207ENST00000483690 TMEM259Q4ZIN3 620 aa14.64□□□□□ -0.07
MCF2-207ENST00000483690 SLF2Q8IX21 1173 aa14.64□□□□□ -0.07
MCF2-207ENST00000483690 HS3ST6Q96QI5 342 aa14.64□□□□□ -0.07
MCF2-207ENST00000483690 BANK1Q8NDB2 785 aa14.63□□□□□ -0.07
MCF2-207ENST00000483690 SPDYE5A6NIY4 337 aa14.62□□□□□ -0.07
MCF2-207ENST00000483690 A6NJR5 290 aa14.62□□□□□ -0.07
MCF2-207ENST00000483690 TK2O00142 265 aa14.62□□□□□ -0.07
MCF2-207ENST00000483690 SAMD7Q7Z3H4 446 aa14.62□□□□□ -0.07
MCF2-207ENST00000483690 HOXA2O43364 376 aa14.61□□□□□ -0.07
MCF2-207ENST00000483690 FBXO31Q5XUX0 539 aaPredicted RBP14.61□□□□□ -0.07
MCF2-207ENST00000483690 CLUAP1Q96AJ1 413 aa14.61□□□□□ -0.07
MCF2-207ENST00000483690 PCDH10Q9P2E7 1040 aa14.6□□□□□ -0.07
MCF2-207ENST00000483690 PCDHB15Q9Y5E8 787 aa14.6□□□□□ -0.07
MCF2-207ENST00000483690 BHMG1C9JSJ3 638 aaPredicted RBP14.59□□□□□ -0.07
MCF2-207ENST00000483690 LILRB3O75022 631 aa14.59□□□□□ -0.07
MCF2-207ENST00000483690 QPCTQ16769 361 aa14.59□□□□□ -0.07
MCF2-207ENST00000483690 NUTM2BA6NNL0 878 aaPredicted RBP14.58□□□□□ -0.08
MCF2-207ENST00000483690 NUTM2EB1AL46 878 aaPredicted RBP14.58□□□□□ -0.08
MCF2-207ENST00000483690 RNF40O75150 1001 aa14.58□□□□□ -0.08
MCF2-207ENST00000483690 NUTM2DQ5VT03 806 aaPredicted RBP14.58□□□□□ -0.08
MCF2-207ENST00000483690 NUTM2AQ8IVF1 878 aaPredicted RBP14.58□□□□□ -0.08
MCF2-207ENST00000483690 RAD21O60216 631 aa14.57□□□□□ -0.08
MCF2-207ENST00000483690 FDX1P10109 184 aa14.57□□□□□ -0.08
MCF2-207ENST00000483690 PRPF38BQ5VTL8 546 aaKnown RBP14.57□□□□□ -0.08
MCF2-207ENST00000483690 MRPL50Q8N5N7 158 aaKnown RBP14.57□□□□□ -0.08
MCF2-207ENST00000483690 ZFRQ96KR1 1074 aaKnown RBP14.57□□□□□ -0.08
MCF2-207ENST00000483690 POTEB3A0JP26 581 aa14.56□□□□□ -0.08
MCF2-207ENST00000483690 POTEBQ6S5H4 581 aa14.56□□□□□ -0.08
MCF2-207ENST00000483690 CFHP08603 1231 aa14.55□□□□□ -0.08
MCF2-207ENST00000483690 GRIPAP1Q4V328 841 aa14.55□□□□□ -0.08
MCF2-207ENST00000483690 ZBTB3Q9H5J0 574 aa14.55□□□□□ -0.08
MCF2-207ENST00000483690 SNRKQ9NRH2 765 aa14.55□□□□□ -0.08
MCF2-207ENST00000483690 LSM11P83369 360 aaKnown RBP eCLIP14.54□□□□□ -0.08
MCF2-207ENST00000483690 ADGRD1Q6QNK2 874 aa14.54□□□□□ -0.08
MCF2-207ENST00000483690 CABLES1Q8TDN4 633 aa14.54□□□□□ -0.08
MCF2-207ENST00000483690 RTL5Q5HYW3 569 aaPredicted RBP14.53□□□□□ -0.08
MCF2-207ENST00000483690 TRAK2O60296 914 aa14.52□□□□□ -0.09
MCF2-207ENST00000483690 HRCP23327 699 aa14.52□□□□□ -0.09
MCF2-207ENST00000483690 HOMEZQ8IX15 550 aa14.52□□□□□ -0.09
MCF2-207ENST00000483690 AP1G2O75843 785 aa14.51□□□□□ -0.09
MCF2-207ENST00000483690 GUCA2AQ02747 115 aa14.51□□□□□ -0.09
MCF2-207ENST00000483690 FUT2Q10981 343 aa14.51□□□□□ -0.09
MCF2-207ENST00000483690 PROSER2Q86WR7 435 aaPredicted RBP14.51□□□□□ -0.09
MCF2-207ENST00000483690 NECTIN2Q92692 538 aa14.51□□□□□ -0.09
MCF2-207ENST00000483690 HLA-CQ95604 372 aa14.51□□□□□ -0.09
MCF2-207ENST00000483690 POM121Q96HA1 1249 aa14.51□□□□□ -0.09
MCF2-207ENST00000483690 LRCH3Q96II8 777 aa14.51□□□□□ -0.09
MCF2-207ENST00000483690 PCDHGC3Q9UN70 934 aa14.51□□□□□ -0.09
MCF2-207ENST00000483690 APBB1O00213 710 aa14.5□□□□□ -0.09
MCF2-207ENST00000483690 KMT5BQ4FZB7 885 aa14.5□□□□□ -0.09
MCF2-207ENST00000483690 ARID3CA6NKF2 412 aa14.49□□□□□ -0.09
MCF2-207ENST00000483690 STAC3Q96MF2 364 aa14.49□□□□□ -0.09
MCF2-207ENST00000483690 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.48□□□□□ -0.09
MCF2-207ENST00000483690 ATP6V1AP38606 617 aa14.47□□□□□ -0.09
MCF2-207ENST00000483690 MTMR2Q13614 643 aa14.47□□□□□ -0.09
MCF2-207ENST00000483690 MTMR14Q8NCE2 650 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms