RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 RPGRIP1LQ68CZ1 1315 aa18.23■□□□□ 0.51
CPNE1-225ENST00000483495 PPP6R1Q9UPN7 881 aa18.22■□□□□ 0.51
CPNE1-225ENST00000483495 ADGRF5Q8IZF2 1346 aa18.22■□□□□ 0.51
CPNE1-225ENST00000483495 DISP3Q9P2K9 1392 aa18.22■□□□□ 0.51
CPNE1-225ENST00000483495 TMF1P82094 1093 aa18.2■□□□□ 0.5
CPNE1-225ENST00000483495 PPLO60437 1756 aa18.19■□□□□ 0.5
CPNE1-225ENST00000483495 ARHGEF40Q8TER5 1519 aa18.19■□□□□ 0.5
CPNE1-225ENST00000483495 EIF3AQ14152 1382 aaKnown RBP18.18■□□□□ 0.5
CPNE1-225ENST00000483495 SLC52A1Q9NWF4 448 aa18.18■□□□□ 0.5
CPNE1-225ENST00000483495 PIK3C2GO75747 1445 aa18.18■□□□□ 0.5
CPNE1-225ENST00000483495 KTN1Q86UP2 1357 aaKnown RBP18.18■□□□□ 0.5
CPNE1-225ENST00000483495 SETBP1Q9Y6X0 1596 aa18.18■□□□□ 0.5
CPNE1-225ENST00000483495 CCDC184Q52MB2 194 aa18.18■□□□□ 0.5
CPNE1-225ENST00000483495 CFAP70Q5T0N1 1121 aa18.18■□□□□ 0.5
CPNE1-225ENST00000483495 CFAP65Q6ZU64 1925 aaKnown RBP18.17■□□□□ 0.5
CPNE1-225ENST00000483495 PREX1Q8TCU6 1659 aa18.16■□□□□ 0.5
CPNE1-225ENST00000483495 CHGAP10645 457 aaKnown RBP18.16■□□□□ 0.5
CPNE1-225ENST00000483495 IDI1Q13907 227 aa18.14■□□□□ 0.49
CPNE1-225ENST00000483495 MRS2Q9HD23 443 aa18.14■□□□□ 0.49
CPNE1-225ENST00000483495 NEXMIFQ5QGS0 1516 aa18.14■□□□□ 0.49
CPNE1-225ENST00000483495 C14orf93Q9H972 538 aaKnown RBP18.14■□□□□ 0.49
CPNE1-225ENST00000483495 PER1O15534 1290 aaPredicted RBP18.13■□□□□ 0.49
CPNE1-225ENST00000483495 SLC24A1O60721 1099 aa18.13■□□□□ 0.49
CPNE1-225ENST00000483495 ZFYVE9O95405 1425 aa18.12■□□□□ 0.49
CPNE1-225ENST00000483495 ERVK-7P63135 1459 aa18.12■□□□□ 0.49
CPNE1-225ENST00000483495 RALBP1Q15311 655 aa18.12■□□□□ 0.49
CPNE1-225ENST00000483495 CDCA8Q53HL2 280 aa18.12■□□□□ 0.49
CPNE1-225ENST00000483495 ADGRB1O14514 1584 aa18.11■□□□□ 0.49
CPNE1-225ENST00000483495 MYO3AQ8NEV4 1616 aa18.11■□□□□ 0.49
CPNE1-225ENST00000483495 SBNO2Q9Y2G9 1366 aa18.1■□□□□ 0.49
CPNE1-225ENST00000483495 TMEM131LA2VDJ0 1609 aa18.1■□□□□ 0.49
CPNE1-225ENST00000483495 VGFO15240 615 aaPredicted RBP18.09■□□□□ 0.49
CPNE1-225ENST00000483495 PARD3Q8TEW0 1356 aa18.08■□□□□ 0.48
CPNE1-225ENST00000483495 SPATA31D1Q6ZQQ2 1576 aa18.07■□□□□ 0.48
CPNE1-225ENST00000483495 CLTCQ00610 1675 aaKnown RBP18.07■□□□□ 0.48
CPNE1-225ENST00000483495 HNRNPUQ00839 825 aaKnown RBP eCLIP18.07■□□□□ 0.48
CPNE1-225ENST00000483495 FBXO31Q5XUX0 539 aaPredicted RBP18.07■□□□□ 0.48
CPNE1-225ENST00000483495 PANK3Q9H999 370 aa18.07■□□□□ 0.48
CPNE1-225ENST00000483495 MYBBP1AQ9BQG0 1328 aaKnown RBP18.07■□□□□ 0.48
CPNE1-225ENST00000483495 BRD4O60885 1362 aaPredicted RBP18.05■□□□□ 0.48
CPNE1-225ENST00000483495 FAM9BQ8IZU0 186 aa18.03■□□□□ 0.48
CPNE1-225ENST00000483495 CENPJQ9HC77 1338 aaPredicted RBP18.02■□□□□ 0.48
CPNE1-225ENST00000483495 KDM5AP29375 1690 aaKnown RBP18.02■□□□□ 0.47
CPNE1-225ENST00000483495 MYOM1P52179 1685 aa18.01■□□□□ 0.47
CPNE1-225ENST00000483495 PNISRQ8TF01 805 aaKnown RBP18.01■□□□□ 0.47
CPNE1-225ENST00000483495 MYO5BQ9ULV0 1848 aa18.01■□□□□ 0.47
CPNE1-225ENST00000483495 CNGB1Q14028 1251 aaPredicted RBP18■□□□□ 0.47
CPNE1-225ENST00000483495 MLECQ14165 292 aa17.99■□□□□ 0.47
CPNE1-225ENST00000483495 NLRP13Q86W25 1043 aa17.99■□□□□ 0.47
CPNE1-225ENST00000483495 TMC1Q8TDI8 760 aa17.99■□□□□ 0.47
CPNE1-225ENST00000483495 ZBED9Q6R2W3 1325 aa17.98■□□□□ 0.47
CPNE1-225ENST00000483495 TMEM132EQ6IEE7 984 aa17.98■□□□□ 0.47
CPNE1-225ENST00000483495 TRAK1Q9UPV9 953 aa17.98■□□□□ 0.47
CPNE1-225ENST00000483495 ZMYM3Q14202 1370 aa17.98■□□□□ 0.47
CPNE1-225ENST00000483495 NUTM2DQ5VT03 806 aaPredicted RBP17.97■□□□□ 0.47
CPNE1-225ENST00000483495 LRPPRCP42704 1394 aaKnown RBP17.97■□□□□ 0.47
CPNE1-225ENST00000483495 A2ML1A8K2U0 1454 aa17.97■□□□□ 0.47
CPNE1-225ENST00000483495 NPC1L1Q9UHC9 1359 aa17.96■□□□□ 0.47
CPNE1-225ENST00000483495 ASXL1Q8IXJ9 1541 aa17.96■□□□□ 0.47
CPNE1-225ENST00000483495 QRICH2Q9H0J4 1663 aa17.96■□□□□ 0.47
CPNE1-225ENST00000483495 AMER1Q5JTC6 1135 aaPredicted RBP17.95■□□□□ 0.46
CPNE1-225ENST00000483495 KNSTRNQ9Y448 316 aa17.95■□□□□ 0.46
CPNE1-225ENST00000483495 ARHGEF28Q8N1W1 1705 aaKnown RBP17.94■□□□□ 0.46
CPNE1-225ENST00000483495 PUS7Q96PZ0 661 aaKnown RBP17.94■□□□□ 0.46
CPNE1-225ENST00000483495 ESF1Q9H501 851 aaKnown RBP17.94■□□□□ 0.46
CPNE1-225ENST00000483495 CC2D1BQ5T0F9 858 aaKnown RBP17.93■□□□□ 0.46
CPNE1-225ENST00000483495 STAG3Q9UJ98 1225 aa17.92■□□□□ 0.46
CPNE1-225ENST00000483495 SUPT16HQ9Y5B9 1047 aaKnown RBP17.92■□□□□ 0.46
CPNE1-225ENST00000483495 ALKQ9UM73 1620 aa17.91■□□□□ 0.46
CPNE1-225ENST00000483495 RIMS2Q9UQ26 1411 aa17.9■□□□□ 0.46
CPNE1-225ENST00000483495 INSRP06213 1382 aa17.89■□□□□ 0.46
CPNE1-225ENST00000483495 YTHDC2Q9H6S0 1430 aaKnown RBP17.88■□□□□ 0.45
CPNE1-225ENST00000483495 TNRQ92752 1358 aa17.88■□□□□ 0.45
CPNE1-225ENST00000483495 PTPRMP28827 1452 aa17.87■□□□□ 0.45
CPNE1-225ENST00000483495 TULP4Q9NRJ4 1543 aa17.87■□□□□ 0.45
CPNE1-225ENST00000483495 EVC2Q86UK5 1308 aa17.86■□□□□ 0.45
CPNE1-225ENST00000483495 CARD14Q9BXL6 1004 aa17.86■□□□□ 0.45
CPNE1-225ENST00000483495 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.85■□□□□ 0.45
CPNE1-225ENST00000483495 PPP2R1AP30153 589 aa17.84■□□□□ 0.45
CPNE1-225ENST00000483495 SETD1AO15047 1707 aaKnown RBP17.83■□□□□ 0.45
CPNE1-225ENST00000483495 DLC1Q96QB1 1528 aa17.83■□□□□ 0.44
CPNE1-225ENST00000483495 TRHP20396 242 aaPredicted RBP17.82■□□□□ 0.44
CPNE1-225ENST00000483495 NRXN3Q9Y4C0 1643 aa17.81■□□□□ 0.44
CPNE1-225ENST00000483495 STK26Q9P289 416 aa17.81■□□□□ 0.44
CPNE1-225ENST00000483495 NLRP1Q9C000 1473 aa17.8■□□□□ 0.44
CPNE1-225ENST00000483495 NEFLP07196 543 aa17.8■□□□□ 0.44
CPNE1-225ENST00000483495 HDGFP51858 240 aaKnown RBP17.8■□□□□ 0.44
CPNE1-225ENST00000483495 SMG6Q86US8 1419 aaKnown RBP17.8■□□□□ 0.44
CPNE1-225ENST00000483495 SLC12A5Q9H2X9 1139 aa17.8■□□□□ 0.44
CPNE1-225ENST00000483495 NINLQ9Y2I6 1382 aa17.8■□□□□ 0.44
CPNE1-225ENST00000483495 BLMP54132 1417 aaPredicted RBP17.8■□□□□ 0.44
CPNE1-225ENST00000483495 FKBP8Q14318 412 aa17.8■□□□□ 0.44
CPNE1-225ENST00000483495 USP32Q8NFA0 1604 aa17.79■□□□□ 0.44
CPNE1-225ENST00000483495 UBR1Q8IWV7 1749 aa17.79■□□□□ 0.44
CPNE1-225ENST00000483495 PRAM1Q96QH2 718 aa17.79■□□□□ 0.44
CPNE1-225ENST00000483495 ABCC11Q96J66 1382 aa17.79■□□□□ 0.44
CPNE1-225ENST00000483495 TMEM2Q9UHN6 1383 aa17.79■□□□□ 0.44
CPNE1-225ENST00000483495 NSD3Q9BZ95 1437 aa17.78■□□□□ 0.44
CPNE1-225ENST00000483495 ANKRD36BQ8N2N9 1353 aa17.78■□□□□ 0.44
CPNE1-225ENST00000483495 SENP3Q9H4L4 574 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms