RNA–Protein interactions for RNA: ENST00000483326.1

LTN1-205, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 1,753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-205ENST00000483326 SUPT5HO00267 1087 aaKnown RBP7.04□□□□□ -1.28
LTN1-205ENST00000483326 RBM46Q8TBY0 533 aaKnown RBP7.04□□□□□ -1.28
LTN1-205ENST00000483326 RNF40O75150 1001 aa7.03□□□□□ -1.28
LTN1-205ENST00000483326 SWT1Q5T5J6 900 aaKnown RBP7.03□□□□□ -1.28
LTN1-205ENST00000483326 DNAJB2P25686 324 aa7.01□□□□□ -1.29
LTN1-205ENST00000483326 ADGRG1Q9Y653 693 aa7.01□□□□□ -1.29
LTN1-205ENST00000483326 HIC1Q14526 733 aa7□□□□□ -1.29
LTN1-205ENST00000483326 TJAP1Q5JTD0 557 aa7□□□□□ -1.29
LTN1-205ENST00000483326 PRR14Q9BWN1 585 aa7□□□□□ -1.29
LTN1-205ENST00000483326 IL21Q9HBE4 155 aa7□□□□□ -1.29
LTN1-205ENST00000483326 OATP04181 439 aa6.99□□□□□ -1.29
LTN1-205ENST00000483326 RBM26Q5T8P6 1007 aaKnown RBP6.98□□□□□ -1.29
LTN1-205ENST00000483326 MTRQ99707 1265 aa6.98□□□□□ -1.29
LTN1-205ENST00000483326 TTBK1Q5TCY1 1321 aaPredicted RBP6.98□□□□□ -1.29
LTN1-205ENST00000483326 APLP1P51693 650 aa6.97□□□□□ -1.29
LTN1-205ENST00000483326 TMEM134Q9H6X4 195 aa6.97□□□□□ -1.29
LTN1-205ENST00000483326 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.97□□□□□ -1.29
LTN1-205ENST00000483326 RCCD1A6NED2 376 aa6.97□□□□□ -1.29
LTN1-205ENST00000483326 NPM2Q86SE8 214 aaKnown RBP6.97□□□□□ -1.29
LTN1-205ENST00000483326 GNPATO15228 680 aa6.95□□□□□ -1.3
LTN1-205ENST00000483326 BRPF1P55201 1214 aaPredicted RBP6.94□□□□□ -1.3
LTN1-205ENST00000483326 FAM161AQ3B820 660 aa6.94□□□□□ -1.3
LTN1-205ENST00000483326 KMT5BQ4FZB7 885 aa6.94□□□□□ -1.3
LTN1-205ENST00000483326 RSPH4AQ5TD94 716 aa6.94□□□□□ -1.3
LTN1-205ENST00000483326 PXYLP1Q8TE99 480 aa6.94□□□□□ -1.3
LTN1-205ENST00000483326 IRX2Q9BZI1 471 aaPredicted RBP6.93□□□□□ -1.3
LTN1-205ENST00000483326 PCDHB3Q9Y5E6 796 aa6.92□□□□□ -1.3
LTN1-205ENST00000483326 UBTFP17480 764 aaKnown RBP6.92□□□□□ -1.3
LTN1-205ENST00000483326 TRIM26Q12899 539 aaPredicted RBP6.92□□□□□ -1.3
LTN1-205ENST00000483326 METTL3Q86U44 580 aaKnown RBP6.92□□□□□ -1.3
LTN1-205ENST00000483326 GPIHBP1Q8IV16 184 aa6.92□□□□□ -1.3
LTN1-205ENST00000483326 ZNF516Q92618 1163 aa6.92□□□□□ -1.3
LTN1-205ENST00000483326 GPR37O15354 613 aa6.91□□□□□ -1.3
LTN1-205ENST00000483326 ACTN4O43707 911 aaKnown RBP6.91□□□□□ -1.3
LTN1-205ENST00000483326 GGCXP38435 758 aa6.91□□□□□ -1.3
LTN1-205ENST00000483326 COPS2P61201 443 aa6.91□□□□□ -1.3
LTN1-205ENST00000483326 ZPR1O75312 459 aa6.9□□□□□ -1.31
LTN1-205ENST00000483326 CFHP08603 1231 aa6.9□□□□□ -1.31
LTN1-205ENST00000483326 PPP1R18Q6NYC8 613 aa6.9□□□□□ -1.31
LTN1-205ENST00000483326 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.9□□□□□ -1.31
LTN1-205ENST00000483326 FECHP22830 423 aa6.89□□□□□ -1.31
LTN1-205ENST00000483326 NISCHQ9Y2I1 1504 aa6.89□□□□□ -1.31
LTN1-205ENST00000483326 LMOD2Q6P5Q4 547 aa6.88□□□□□ -1.31
LTN1-205ENST00000483326 TMUB1Q9BVT8 246 aa6.88□□□□□ -1.31
LTN1-205ENST00000483326 SLC10A3P09131 477 aa6.87□□□□□ -1.31
LTN1-205ENST00000483326 BLOC1S3Q6QNY0 202 aa6.87□□□□□ -1.31
LTN1-205ENST00000483326 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.87□□□□□ -1.31
LTN1-205ENST00000483326 NKX2-3Q8TAU0 364 aa6.87□□□□□ -1.31
LTN1-205ENST00000483326 NR1I2O75469 434 aa6.86□□□□□ -1.31
LTN1-205ENST00000483326 SULF1Q8IWU6 871 aa6.85□□□□□ -1.31
LTN1-205ENST00000483326 PRKD2Q9BZL6 878 aa6.85□□□□□ -1.31
LTN1-205ENST00000483326 V9GY48 417 aaPredicted RBP6.85□□□□□ -1.31
LTN1-205ENST00000483326 LAPTM4AQ15012 233 aa6.85□□□□□ -1.31
LTN1-205ENST00000483326 NEUROD2Q15784 382 aa6.85□□□□□ -1.31
LTN1-205ENST00000483326 RDH13Q8NBN7 331 aa6.84□□□□□ -1.31
LTN1-205ENST00000483326 HRCP23327 699 aa6.83□□□□□ -1.32
LTN1-205ENST00000483326 MAP2K5Q13163 448 aa6.83□□□□□ -1.32
LTN1-205ENST00000483326 DDX11L8A8MPP1 907 aa6.82□□□□□ -1.32
LTN1-205ENST00000483326 MINK1Q8N4C8 1332 aaPredicted RBP6.82□□□□□ -1.32
LTN1-205ENST00000483326 SCUBE3Q8IX30 993 aa6.81□□□□□ -1.32
LTN1-205ENST00000483326 IRF6O14896 467 aa6.8□□□□□ -1.32
LTN1-205ENST00000483326 ADH1BP00325 375 aa6.8□□□□□ -1.32
LTN1-205ENST00000483326 PHOX2BQ99453 314 aa6.8□□□□□ -1.32
LTN1-205ENST00000483326 TLL1O43897 1013 aa6.8□□□□□ -1.32
LTN1-205ENST00000483326 ATP6V1AP38606 617 aa6.8□□□□□ -1.32
LTN1-205ENST00000483326 GCGRP47871 477 aa6.8□□□□□ -1.32
LTN1-205ENST00000483326 NLRP7Q8WX94 980 aa6.8□□□□□ -1.32
LTN1-205ENST00000483326 ZMYND15Q9H091 742 aa6.8□□□□□ -1.32
LTN1-205ENST00000483326 RSPH6AQ9H0K4 717 aa6.8□□□□□ -1.32
LTN1-205ENST00000483326 RNF223E7ERA6 249 aa6.79□□□□□ -1.32
LTN1-205ENST00000483326 GFRA3O60609 400 aa6.79□□□□□ -1.32
LTN1-205ENST00000483326 GRIPAP1Q4V328 841 aa6.79□□□□□ -1.32
LTN1-205ENST00000483326 ANKLE1Q8NAG6 615 aa6.79□□□□□ -1.32
LTN1-205ENST00000483326 PUS10Q3MIT2 529 aaKnown RBP6.78□□□□□ -1.32
LTN1-205ENST00000483326 Q6ZNB5 142 aa6.78□□□□□ -1.32
LTN1-205ENST00000483326 SLC6A16Q9GZN6 736 aa6.78□□□□□ -1.32
LTN1-205ENST00000483326 S1PR4O95977 384 aa6.77□□□□□ -1.33
LTN1-205ENST00000483326 SLC19A1P41440 591 aa6.77□□□□□ -1.33
LTN1-205ENST00000483326 MORN1Q5T089 497 aa6.77□□□□□ -1.33
LTN1-205ENST00000483326 FUT2Q10981 343 aa6.77□□□□□ -1.33
LTN1-205ENST00000483326 SPSB2Q99619 263 aa6.77□□□□□ -1.33
LTN1-205ENST00000483326 NRG2O14511 850 aaPredicted RBP6.76□□□□□ -1.33
LTN1-205ENST00000483326 FMNL1O95466 1100 aaPredicted RBP6.75□□□□□ -1.33
LTN1-205ENST00000483326 ZC3H15Q8WU90 426 aaKnown RBP6.75□□□□□ -1.33
LTN1-205ENST00000483326 SALL2Q9Y467 1007 aaPredicted RBP6.75□□□□□ -1.33
LTN1-205ENST00000483326 CD46P15529 392 aa6.74□□□□□ -1.33
LTN1-205ENST00000483326 CCDC102AQ96A19 550 aa6.74□□□□□ -1.33
LTN1-205ENST00000483326 CCDC9Q9Y3X0 531 aaKnown RBP6.74□□□□□ -1.33
LTN1-205ENST00000483326 PPEF1O14829 653 aaPredicted RBP6.74□□□□□ -1.33
LTN1-205ENST00000483326 CLCN1P35523 988 aa6.74□□□□□ -1.33
LTN1-205ENST00000483326 MDM2Q00987 491 aaPredicted RBP6.74□□□□□ -1.33
LTN1-205ENST00000483326 PDZRN3Q9UPQ7 1066 aa6.74□□□□□ -1.33
LTN1-205ENST00000483326 SLC27A5Q9Y2P5 690 aa6.74□□□□□ -1.33
LTN1-205ENST00000483326 KRI1Q8N9T8 703 aaKnown RBP6.73□□□□□ -1.33
LTN1-205ENST00000483326 THAP11Q96EK4 314 aa6.73□□□□□ -1.33
LTN1-205ENST00000483326 USP46P62068 366 aa6.72□□□□□ -1.33
LTN1-205ENST00000483326 Q3C1V9 767 aa6.72□□□□□ -1.33
LTN1-205ENST00000483326 SPRYD7Q5W111 196 aa6.72□□□□□ -1.33
LTN1-205ENST00000483326 ZNF598Q86UK7 904 aaKnown RBP6.72□□□□□ -1.33
LTN1-205ENST00000483326 SLC24A3Q9HC58 644 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms