RNA–Protein interactions for RNA: ENST00000483148.5

APTX-226, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,764 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-226ENST00000483148 MAST1Q9Y2H9 1570 aa14.26□□□□□ -0.13
APTX-226ENST00000483148 TMEM2Q9UHN6 1383 aa14.25□□□□□ -0.13
APTX-226ENST00000483148 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.24□□□□□ -0.13
APTX-226ENST00000483148 EIF2AK4Q9P2K8 1649 aaKnown RBP14.24□□□□□ -0.13
APTX-226ENST00000483148 IDI1Q13907 227 aa14.23□□□□□ -0.13
APTX-226ENST00000483148 ARHGAP31Q2M1Z3 1444 aa14.23□□□□□ -0.13
APTX-226ENST00000483148 ROBO1Q9Y6N7 1651 aa14.23□□□□□ -0.13
APTX-226ENST00000483148 RRP7BPQ9NSQ0 103 aa14.22□□□□□ -0.13
APTX-226ENST00000483148 STAG3Q9UJ98 1225 aa14.22□□□□□ -0.13
APTX-226ENST00000483148 PIK3C2BO00750 1634 aa14.21□□□□□ -0.13
APTX-226ENST00000483148 SETD1AO15047 1707 aaKnown RBP14.21□□□□□ -0.13
APTX-226ENST00000483148 SLAIN2Q9P270 581 aa14.2□□□□□ -0.14
APTX-226ENST00000483148 ADGRL2O95490 1459 aa14.2□□□□□ -0.14
APTX-226ENST00000483148 TET3O43151 1660 aa14.2□□□□□ -0.14
APTX-226ENST00000483148 DUOX2Q9NRD8 1548 aa14.2□□□□□ -0.14
APTX-226ENST00000483148 FANCIQ9NVI1 1328 aa14.18□□□□□ -0.14
APTX-226ENST00000483148 FOXD1Q16676 465 aa14.18□□□□□ -0.14
APTX-226ENST00000483148 UPF1Q92900 1129 aaKnown RBP eCLIP14.18□□□□□ -0.14
APTX-226ENST00000483148 ROCK1Q13464 1354 aa14.17□□□□□ -0.14
APTX-226ENST00000483148 KIF15Q9NS87 1388 aa14.17□□□□□ -0.14
APTX-226ENST00000483148 NEFLP07196 543 aa14.17□□□□□ -0.14
APTX-226ENST00000483148 JCADQ9P266 1359 aa14.17□□□□□ -0.14
APTX-226ENST00000483148 PRDM15P57071 1507 aaPredicted RBP14.17□□□□□ -0.14
APTX-226ENST00000483148 ITGAEP38570 1179 aa14.16□□□□□ -0.14
APTX-226ENST00000483148 CHIC2Q9UKJ5 165 aa14.16□□□□□ -0.14
APTX-226ENST00000483148 EFCAB6Q5THR3 1501 aa14.16□□□□□ -0.14
APTX-226ENST00000483148 DHX57Q6P158 1386 aaKnown RBP14.15□□□□□ -0.14
APTX-226ENST00000483148 ANKRD30AQ9BXX3 1397 aa14.15□□□□□ -0.14
APTX-226ENST00000483148 FKBP8Q14318 412 aa14.15□□□□□ -0.14
APTX-226ENST00000483148 PHLPP1O60346 1717 aa14.15□□□□□ -0.14
APTX-226ENST00000483148 MSH6P52701 1360 aa14.15□□□□□ -0.14
APTX-226ENST00000483148 TRIM52Q96A61 297 aa14.14□□□□□ -0.15
APTX-226ENST00000483148 BCANQ96GW7 911 aa14.14□□□□□ -0.15
APTX-226ENST00000483148 ERBINQ96RT1 1412 aa14.13□□□□□ -0.15
APTX-226ENST00000483148 LRP6O75581 1613 aa14.12□□□□□ -0.15
APTX-226ENST00000483148 NWD1Q149M9 1564 aa14.12□□□□□ -0.15
APTX-226ENST00000483148 KANK1Q14678 1352 aa14.11□□□□□ -0.15
APTX-226ENST00000483148 NOS1P29475 1434 aa14.11□□□□□ -0.15
APTX-226ENST00000483148 NKTRP30414 1462 aaKnown RBP14.11□□□□□ -0.15
APTX-226ENST00000483148 KDM5AP29375 1690 aaKnown RBP14.11□□□□□ -0.15
APTX-226ENST00000483148 COL16A1Q07092 1604 aaPredicted RBP14.1□□□□□ -0.15
APTX-226ENST00000483148 HFM1A2PYH4 1435 aa14.09□□□□□ -0.15
APTX-226ENST00000483148 MEX3CQ5U5Q3 659 aaKnown RBP14.09□□□□□ -0.15
APTX-226ENST00000483148 LMTK2Q8IWU2 1503 aa14.09□□□□□ -0.15
APTX-226ENST00000483148 NAIPQ13075 1403 aa14.09□□□□□ -0.15
APTX-226ENST00000483148 ZNF772Q68DY9 489 aaPredicted RBP14.09□□□□□ -0.15
APTX-226ENST00000483148 GCC2Q8IWJ2 1684 aa14.08□□□□□ -0.15
APTX-226ENST00000483148 SPATA31A6Q5VVP1 1343 aa14.08□□□□□ -0.16
APTX-226ENST00000483148 MSH5O43196 834 aa14.08□□□□□ -0.16
APTX-226ENST00000483148 SLC52A1Q9NWF4 448 aa14.08□□□□□ -0.16
APTX-226ENST00000483148 ANKRD50Q9ULJ7 1429 aa14.08□□□□□ -0.16
APTX-226ENST00000483148 CHD2O14647 1828 aaKnown RBP14.07□□□□□ -0.16
APTX-226ENST00000483148 ADGRB3O60242 1522 aa14.07□□□□□ -0.16
APTX-226ENST00000483148 RXRBP28702 533 aa14.06□□□□□ -0.16
APTX-226ENST00000483148 TBX22Q9Y458 520 aa14.06□□□□□ -0.16
APTX-226ENST00000483148 ZFYVE9O95405 1425 aa14.06□□□□□ -0.16
APTX-226ENST00000483148 PLEKHG1Q9ULL1 1385 aa14.06□□□□□ -0.16
APTX-226ENST00000483148 NUTM2BA6NNL0 878 aaPredicted RBP14.05□□□□□ -0.16
APTX-226ENST00000483148 NUTM2EB1AL46 878 aaPredicted RBP14.05□□□□□ -0.16
APTX-226ENST00000483148 NUTM2AQ8IVF1 878 aaPredicted RBP14.05□□□□□ -0.16
APTX-226ENST00000483148 NUTM2DQ5VT03 806 aaPredicted RBP14.04□□□□□ -0.16
APTX-226ENST00000483148 C14orf37Q86TY3 774 aa14.04□□□□□ -0.16
APTX-226ENST00000483148 RIMS2Q9UQ26 1411 aa14.04□□□□□ -0.16
APTX-226ENST00000483148 PPP1R15AO75807 674 aaPredicted RBP14.04□□□□□ -0.16
APTX-226ENST00000483148 C19orf44Q9H6X5 657 aa14.04□□□□□ -0.16
APTX-226ENST00000483148 MYO5BQ9ULV0 1848 aa14.03□□□□□ -0.16
APTX-226ENST00000483148 NCOA3Q9Y6Q9 1424 aa14.02□□□□□ -0.16
APTX-226ENST00000483148 CADPS2Q86UW7 1296 aa14.02□□□□□ -0.16
APTX-226ENST00000483148 CCER2I3L3R5 266 aa14.01□□□□□ -0.17
APTX-226ENST00000483148 ATF3P18847 181 aa14.01□□□□□ -0.17
APTX-226ENST00000483148 ERICH6BQ5W0A0 696 aa14.01□□□□□ -0.17
APTX-226ENST00000483148 BRINP3Q76B58 766 aa14.01□□□□□ -0.17
APTX-226ENST00000483148 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.01□□□□□ -0.17
APTX-226ENST00000483148 AHDC1Q5TGY3 1603 aaPredicted RBP14.01□□□□□ -0.17
APTX-226ENST00000483148 ADAMTS13Q76LX8 1427 aa14.01□□□□□ -0.17
APTX-226ENST00000483148 SETD5Q9C0A6 1442 aa14.01□□□□□ -0.17
APTX-226ENST00000483148 HDGFP51858 240 aaKnown RBP14.01□□□□□ -0.17
APTX-226ENST00000483148 SHPRHQ149N8 1683 aa14□□□□□ -0.17
APTX-226ENST00000483148 AFF2P51816 1311 aa14□□□□□ -0.17
APTX-226ENST00000483148 UNC13BO14795 1591 aa14□□□□□ -0.17
APTX-226ENST00000483148 CHGAP10645 457 aaKnown RBP13.99□□□□□ -0.17
APTX-226ENST00000483148 TMEM131LA2VDJ0 1609 aa13.98□□□□□ -0.17
APTX-226ENST00000483148 DIP2AQ14689 1571 aa13.98□□□□□ -0.17
APTX-226ENST00000483148 AMOTL2Q9Y2J4 779 aa13.98□□□□□ -0.17
APTX-226ENST00000483148 PTPRUQ92729 1446 aa13.97□□□□□ -0.17
APTX-226ENST00000483148 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.97□□□□□ -0.17
APTX-226ENST00000483148 CDK12Q9NYV4 1490 aaPredicted RBP13.97□□□□□ -0.17
APTX-226ENST00000483148 RAB3GAP2Q9H2M9 1393 aa13.97□□□□□ -0.17
APTX-226ENST00000483148 QTRT2Q9H974 415 aaKnown RBP13.96□□□□□ -0.17
APTX-226ENST00000483148 RPRD2Q5VT52 1461 aaKnown RBP13.96□□□□□ -0.17
APTX-226ENST00000483148 DEKP35659 375 aaKnown RBP13.96□□□□□ -0.18
APTX-226ENST00000483148 DDX17Q92841 729 aaKnown RBP13.96□□□□□ -0.18
APTX-226ENST00000483148 PIK3R4Q99570 1358 aa13.94□□□□□ -0.18
APTX-226ENST00000483148 IQGAP3Q86VI3 1631 aa13.94□□□□□ -0.18
APTX-226ENST00000483148 C8orf37Q96NL8 207 aa13.94□□□□□ -0.18
APTX-226ENST00000483148 RGS12O14924 1447 aa13.93□□□□□ -0.18
APTX-226ENST00000483148 RBM6P78332 1123 aaKnown RBP13.93□□□□□ -0.18
APTX-226ENST00000483148 NUP155O75694 1391 aa13.92□□□□□ -0.18
APTX-226ENST00000483148 LRRC59Q96AG4 307 aaKnown RBP13.91□□□□□ -0.18
APTX-226ENST00000483148 ASXL1Q8IXJ9 1541 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms