RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 MTRQ99707 1265 aa8.65□□□□□ -1.02
LAPTM4A-202ENST00000483117 DNAJB2P25686 324 aa8.64□□□□□ -1.03
LAPTM4A-202ENST00000483117 LCE2AQ5TA79 106 aaPredicted RBP8.64□□□□□ -1.03
LAPTM4A-202ENST00000483117 RCCD1A6NED2 376 aa8.63□□□□□ -1.03
LAPTM4A-202ENST00000483117 TREML4Q6UXN2 200 aa8.63□□□□□ -1.03
LAPTM4A-202ENST00000483117 VSIG10Q8N0Z9 540 aa8.63□□□□□ -1.03
LAPTM4A-202ENST00000483117 ZNF516Q92618 1163 aa8.63□□□□□ -1.03
LAPTM4A-202ENST00000483117 STK17AQ9UEE5 414 aa8.63□□□□□ -1.03
LAPTM4A-202ENST00000483117 FECHP22830 423 aa8.62□□□□□ -1.03
LAPTM4A-202ENST00000483117 HIC1Q14526 733 aa8.62□□□□□ -1.03
LAPTM4A-202ENST00000483117 TMEM134Q9H6X4 195 aa8.62□□□□□ -1.03
LAPTM4A-202ENST00000483117 GPR37O15354 613 aa8.61□□□□□ -1.03
LAPTM4A-202ENST00000483117 SLC4A3P48751 1232 aa8.61□□□□□ -1.03
LAPTM4A-202ENST00000483117 NECTIN2Q92692 538 aa8.61□□□□□ -1.03
LAPTM4A-202ENST00000483117 IL21Q9HBE4 155 aa8.61□□□□□ -1.03
LAPTM4A-202ENST00000483117 PXYLP1Q8TE99 480 aa8.6□□□□□ -1.03
LAPTM4A-202ENST00000483117 GNPATO15228 680 aa8.59□□□□□ -1.03
LAPTM4A-202ENST00000483117 COPS2P61201 443 aa8.59□□□□□ -1.03
LAPTM4A-202ENST00000483117 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.57□□□□□ -1.04
LAPTM4A-202ENST00000483117 OATP04181 439 aa8.57□□□□□ -1.04
LAPTM4A-202ENST00000483117 METTL3Q86U44 580 aaKnown RBP8.57□□□□□ -1.04
LAPTM4A-202ENST00000483117 NKX2-3Q8TAU0 364 aa8.57□□□□□ -1.04
LAPTM4A-202ENST00000483117 GPIHBP1Q8IV16 184 aa8.56□□□□□ -1.04
LAPTM4A-202ENST00000483117 SLC10A3P09131 477 aa8.55□□□□□ -1.04
LAPTM4A-202ENST00000483117 PCDHB3Q9Y5E6 796 aa8.55□□□□□ -1.04
LAPTM4A-202ENST00000483117 CFHP08603 1231 aa8.54□□□□□ -1.04
LAPTM4A-202ENST00000483117 SUZ12Q15022 739 aaKnown RBP8.54□□□□□ -1.04
LAPTM4A-202ENST00000483117 PPP1R18Q6NYC8 613 aa8.54□□□□□ -1.04
LAPTM4A-202ENST00000483117 BLOC1S3Q6QNY0 202 aa8.54□□□□□ -1.04
LAPTM4A-202ENST00000483117 NLRP7Q8WX94 980 aa8.54□□□□□ -1.04
LAPTM4A-202ENST00000483117 PRR14Q9BWN1 585 aa8.54□□□□□ -1.04
LAPTM4A-202ENST00000483117 ZPR1O75312 459 aa8.52□□□□□ -1.05
LAPTM4A-202ENST00000483117 KMT5BQ4FZB7 885 aa8.52□□□□□ -1.05
LAPTM4A-202ENST00000483117 PHOX2BQ99453 314 aa8.51□□□□□ -1.05
LAPTM4A-202ENST00000483117 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.51□□□□□ -1.05
LAPTM4A-202ENST00000483117 ACTN4O43707 911 aaKnown RBP8.5□□□□□ -1.05
LAPTM4A-202ENST00000483117 PRKD2Q9BZL6 878 aa8.5□□□□□ -1.05
LAPTM4A-202ENST00000483117 POTECB2RU33 542 aa8.49□□□□□ -1.05
LAPTM4A-202ENST00000483117 TLL1O43897 1013 aa8.49□□□□□ -1.05
LAPTM4A-202ENST00000483117 DAXXQ9UER7 740 aaPredicted RBP8.48□□□□□ -1.05
LAPTM4A-202ENST00000483117 TULP1O00294 542 aaPredicted RBP8.47□□□□□ -1.05
LAPTM4A-202ENST00000483117 DDX11L8A8MPP1 907 aa8.46□□□□□ -1.06
LAPTM4A-202ENST00000483117 PUS10Q3MIT2 529 aaKnown RBP8.46□□□□□ -1.06
LAPTM4A-202ENST00000483117 RDH13Q8NBN7 331 aa8.46□□□□□ -1.06
LAPTM4A-202ENST00000483117 RSPH4AQ5TD94 716 aa8.45□□□□□ -1.06
LAPTM4A-202ENST00000483117 PDZRN3Q9UPQ7 1066 aa8.45□□□□□ -1.06
LAPTM4A-202ENST00000483117 GGCXP38435 758 aa8.44□□□□□ -1.06
LAPTM4A-202ENST00000483117 MAP2K5Q13163 448 aa8.43□□□□□ -1.06
LAPTM4A-202ENST00000483117 RNF223E7ERA6 249 aa8.42□□□□□ -1.06
LAPTM4A-202ENST00000483117 NR1I2O75469 434 aa8.42□□□□□ -1.06
LAPTM4A-202ENST00000483117 SCUBE3Q8IX30 993 aa8.42□□□□□ -1.06
LAPTM4A-202ENST00000483117 TMUB1Q9BVT8 246 aa8.42□□□□□ -1.06
LAPTM4A-202ENST00000483117 V9GY48 417 aaPredicted RBP8.42□□□□□ -1.06
LAPTM4A-202ENST00000483117 PPEF1O14829 653 aaPredicted RBP8.41□□□□□ -1.06
LAPTM4A-202ENST00000483117 S1PR4O95977 384 aa8.41□□□□□ -1.06
LAPTM4A-202ENST00000483117 INSM1Q01101 510 aaPredicted RBP8.41□□□□□ -1.06
LAPTM4A-202ENST00000483117 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.41□□□□□ -1.06
LAPTM4A-202ENST00000483117 IRF6O14896 467 aa8.4□□□□□ -1.06
LAPTM4A-202ENST00000483117 ADH1BP00325 375 aa8.4□□□□□ -1.06
LAPTM4A-202ENST00000483117 FUT2Q10981 343 aa8.4□□□□□ -1.06
LAPTM4A-202ENST00000483117 SULF1Q8IWU6 871 aa8.4□□□□□ -1.06
LAPTM4A-202ENST00000483117 GCGRP47871 477 aa8.39□□□□□ -1.07
LAPTM4A-202ENST00000483117 MINK1Q8N4C8 1332 aaPredicted RBP8.38□□□□□ -1.07
LAPTM4A-202ENST00000483117 MORN1Q5T089 497 aa8.38□□□□□ -1.07
LAPTM4A-202ENST00000483117 CCDC102AQ96A19 550 aa8.38□□□□□ -1.07
LAPTM4A-202ENST00000483117 EMID1Q96A84 441 aaPredicted RBP8.38□□□□□ -1.07
LAPTM4A-202ENST00000483117 MDM2Q00987 491 aaPredicted RBP8.37□□□□□ -1.07
LAPTM4A-202ENST00000483117 LMOD2Q6P5Q4 547 aa8.37□□□□□ -1.07
LAPTM4A-202ENST00000483117 SLC6A16Q9GZN6 736 aa8.37□□□□□ -1.07
LAPTM4A-202ENST00000483117 WIPF1O43516 503 aa8.36□□□□□ -1.07
LAPTM4A-202ENST00000483117 ATP6V1AP38606 617 aa8.36□□□□□ -1.07
LAPTM4A-202ENST00000483117 ANKLE1Q8NAG6 615 aa8.36□□□□□ -1.07
LAPTM4A-202ENST00000483117 SPSB2Q99619 263 aa8.36□□□□□ -1.07
LAPTM4A-202ENST00000483117 WFS1O76024 890 aa8.35□□□□□ -1.07
LAPTM4A-202ENST00000483117 CD46P15529 392 aa8.35□□□□□ -1.07
LAPTM4A-202ENST00000483117 SLC19A1P41440 591 aa8.35□□□□□ -1.07
LAPTM4A-202ENST00000483117 SLC27A5Q9Y2P5 690 aa8.35□□□□□ -1.07
LAPTM4A-202ENST00000483117 MYT1Q01538 1121 aa8.34□□□□□ -1.07
LAPTM4A-202ENST00000483117 THAP11Q96EK4 314 aa8.34□□□□□ -1.07
LAPTM4A-202ENST00000483117 LIAT1Q6ZQX7 453 aa8.33□□□□□ -1.08
LAPTM4A-202ENST00000483117 PLA2G2CQ5R387 149 aa8.32□□□□□ -1.08
LAPTM4A-202ENST00000483117 FMNL1O95466 1100 aaPredicted RBP8.31□□□□□ -1.08
LAPTM4A-202ENST00000483117 SPRYD7Q5W111 196 aa8.3□□□□□ -1.08
LAPTM4A-202ENST00000483117 RNF19BQ6ZMZ0 732 aa8.3□□□□□ -1.08
LAPTM4A-202ENST00000483117 FAM160A2Q8N612 972 aaPredicted RBP8.3□□□□□ -1.08
LAPTM4A-202ENST00000483117 KRI1Q8N9T8 703 aaKnown RBP8.3□□□□□ -1.08
LAPTM4A-202ENST00000483117 KDM4AO75164 1064 aa8.29□□□□□ -1.08
LAPTM4A-202ENST00000483117 GRIPAP1Q4V328 841 aa8.29□□□□□ -1.08
LAPTM4A-202ENST00000483117 BRICD5Q6PL45 260 aa8.29□□□□□ -1.08
LAPTM4A-202ENST00000483117 TRIM67Q6ZTA4 783 aa8.29□□□□□ -1.08
LAPTM4A-202ENST00000483117 ZC3H15Q8WU90 426 aaKnown RBP8.29□□□□□ -1.08
LAPTM4A-202ENST00000483117 HLA-CQ95604 372 aa8.29□□□□□ -1.08
LAPTM4A-202ENST00000483117 REPIN1Q9BWE0 567 aaKnown RBP8.29□□□□□ -1.08
LAPTM4A-202ENST00000483117 GPCPD1Q9NPB8 672 aa8.29□□□□□ -1.08
LAPTM4A-202ENST00000483117 PRDM9Q9NQV7 894 aa8.29□□□□□ -1.08
LAPTM4A-202ENST00000483117 ZMYND10O75800 440 aa8.28□□□□□ -1.08
LAPTM4A-202ENST00000483117 CLCN1P35523 988 aa8.28□□□□□ -1.08
LAPTM4A-202ENST00000483117 BARGINQ6ZT62 677 aa8.28□□□□□ -1.08
LAPTM4A-202ENST00000483117 ZNF598Q86UK7 904 aaKnown RBP8.28□□□□□ -1.08
LAPTM4A-202ENST00000483117 FAM217BQ9NTX9 383 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms