RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 IFT172Q9UG01 1749 aa21.4■■□□□ 1.02
PHGDH-205ENST00000482968 VGFO15240 615 aaPredicted RBP21.39■■□□□ 1.01
PHGDH-205ENST00000482968 UBR1Q8IWV7 1749 aa21.39■■□□□ 1.01
PHGDH-205ENST00000482968 MYO3AQ8NEV4 1616 aa21.39■■□□□ 1.01
PHGDH-205ENST00000482968 NEXMIFQ5QGS0 1516 aa21.39■■□□□ 1.01
PHGDH-205ENST00000482968 KDM5AP29375 1690 aaKnown RBP21.36■■□□□ 1.01
PHGDH-205ENST00000482968 MYOM2P54296 1465 aa21.36■■□□□ 1.01
PHGDH-205ENST00000482968 THEMISQ8N1K5 641 aaPredicted RBP21.36■■□□□ 1.01
PHGDH-205ENST00000482968 SENP3Q9H4L4 574 aaPredicted RBP21.36■■□□□ 1.01
PHGDH-205ENST00000482968 RIMS2Q9UQ26 1411 aa21.35■■□□□ 1.01
PHGDH-205ENST00000482968 CEP170BQ9Y4F5 1589 aaPredicted RBP21.33■■□□□ 1.01
PHGDH-205ENST00000482968 TMEM2Q9UHN6 1383 aa21.33■■□□□ 1.01
PHGDH-205ENST00000482968 HDGFP51858 240 aaKnown RBP21.33■■□□□ 1.01
PHGDH-205ENST00000482968 NBPF1Q3BBV0 1214 aa21.33■■□□□ 1.01
PHGDH-205ENST00000482968 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.32■■□□□ 1
PHGDH-205ENST00000482968 CFAP70Q5T0N1 1121 aa21.31■■□□□ 1
PHGDH-205ENST00000482968 ZFYVE9O95405 1425 aa21.31■■□□□ 1
PHGDH-205ENST00000482968 NRXN1Q9ULB1 1477 aa21.31■■□□□ 1
PHGDH-205ENST00000482968 TRPM1Q7Z4N2 1603 aa21.31■■□□□ 1
PHGDH-205ENST00000482968 ROCK2O75116 1388 aaKnown RBP21.31■■□□□ 1
PHGDH-205ENST00000482968 RALGAPBQ86X10 1494 aa21.3■■□□□ 1
PHGDH-205ENST00000482968 CARD11Q9BXL7 1154 aa21.3■■□□□ 1
PHGDH-205ENST00000482968 TXNDC2Q86VQ3 553 aa21.29■■□□□ 1
PHGDH-205ENST00000482968 PIK3C2GO75747 1445 aa21.29■■□□□ 1
PHGDH-205ENST00000482968 LTKP29376 864 aa21.28■■□□□ 1
PHGDH-205ENST00000482968 EID1Q9Y6B2 187 aa21.28■■□□□ 1
PHGDH-205ENST00000482968 ZNF142P52746 1687 aaPredicted RBP21.27■■□□□ 1
PHGDH-205ENST00000482968 HIRIP3Q9BW71 556 aaPredicted RBP21.27■■□□□ 1
PHGDH-205ENST00000482968 C14orf93Q9H972 538 aaKnown RBP21.27■■□□□ 1
PHGDH-205ENST00000482968 BCANQ96GW7 911 aa21.25■□□□□ 0.99
PHGDH-205ENST00000482968 SLIT1O75093 1534 aa21.25■□□□□ 0.99
PHGDH-205ENST00000482968 EIF4G2P78344 907 aaKnown RBP eCLIP21.25■□□□□ 0.99
PHGDH-205ENST00000482968 ARHGAP23Q9P227 1491 aa21.24■□□□□ 0.99
PHGDH-205ENST00000482968 KIAA1210Q9ULL0 1709 aa21.23■□□□□ 0.99
PHGDH-205ENST00000482968 HSPA5P11021 654 aaKnown RBP21.23■□□□□ 0.99
PHGDH-205ENST00000482968 ZNF316A6NFI3 1004 aaPredicted RBP21.22■□□□□ 0.99
PHGDH-205ENST00000482968 TMEM132EQ6IEE7 984 aa21.22■□□□□ 0.99
PHGDH-205ENST00000482968 GPRASP1Q5JY77 1395 aa21.21■□□□□ 0.99
PHGDH-205ENST00000482968 ANKLE2Q86XL3 938 aa21.2■□□□□ 0.99
PHGDH-205ENST00000482968 USP47Q96K76 1375 aa21.19■□□□□ 0.98
PHGDH-205ENST00000482968 ALKQ9UM73 1620 aa21.18■□□□□ 0.98
PHGDH-205ENST00000482968 SCAF11Q99590 1463 aaKnown RBP21.18■□□□□ 0.98
PHGDH-205ENST00000482968 PLEKHG1Q9ULL1 1385 aa21.17■□□□□ 0.98
PHGDH-205ENST00000482968 LAMC1P11047 1609 aa21.16■□□□□ 0.98
PHGDH-205ENST00000482968 SETBP1Q9Y6X0 1596 aa21.15■□□□□ 0.98
PHGDH-205ENST00000482968 HSPA2P54652 639 aa21.15■□□□□ 0.98
PHGDH-205ENST00000482968 SLC26A8Q96RN1 970 aa21.15■□□□□ 0.98
PHGDH-205ENST00000482968 NRXN3Q9Y4C0 1643 aa21.15■□□□□ 0.98
PHGDH-205ENST00000482968 IQGAP1P46940 1657 aa21.14■□□□□ 0.98
PHGDH-205ENST00000482968 ST20-MTHFSA0A0A6YYL1 179 aa21.14■□□□□ 0.97
PHGDH-205ENST00000482968 TRAK1Q9UPV9 953 aa21.13■□□□□ 0.97
PHGDH-205ENST00000482968 ADGRB1O14514 1584 aa21.13■□□□□ 0.97
PHGDH-205ENST00000482968 NCKAP5LQ9HCH0 1330 aa21.13■□□□□ 0.97
PHGDH-205ENST00000482968 STK26Q9P289 416 aa21.13■□□□□ 0.97
PHGDH-205ENST00000482968 ADAMTS13Q76LX8 1427 aa21.11■□□□□ 0.97
PHGDH-205ENST00000482968 LMTK3Q96Q04 1460 aa21.1■□□□□ 0.97
PHGDH-205ENST00000482968 METP08581 1390 aa21.1■□□□□ 0.97
PHGDH-205ENST00000482968 SETD1AO15047 1707 aaKnown RBP21.09■□□□□ 0.97
PHGDH-205ENST00000482968 ASXL1Q8IXJ9 1541 aa21.09■□□□□ 0.97
PHGDH-205ENST00000482968 TBX22Q9Y458 520 aa21.08■□□□□ 0.97
PHGDH-205ENST00000482968 YTHDC2Q9H6S0 1430 aaKnown RBP21.07■□□□□ 0.96
PHGDH-205ENST00000482968 POLR1AO95602 1720 aaPredicted RBP21.06■□□□□ 0.96
PHGDH-205ENST00000482968 MED14O60244 1454 aa21.06■□□□□ 0.96
PHGDH-205ENST00000482968 EIF3AQ14152 1382 aaKnown RBP21.06■□□□□ 0.96
PHGDH-205ENST00000482968 NPHP4O75161 1426 aaPredicted RBP21.05■□□□□ 0.96
PHGDH-205ENST00000482968 C11orf95C9JLR9 678 aaPredicted RBP21.03■□□□□ 0.96
PHGDH-205ENST00000482968 LRPPRCP42704 1394 aaKnown RBP21.03■□□□□ 0.96
PHGDH-205ENST00000482968 TESK2Q96S53 571 aa21.02■□□□□ 0.96
PHGDH-205ENST00000482968 CENPJQ9HC77 1338 aaPredicted RBP21.01■□□□□ 0.95
PHGDH-205ENST00000482968 ABCC11Q96J66 1382 aa21.01■□□□□ 0.95
PHGDH-205ENST00000482968 SAFB2Q14151 953 aaKnown RBP eCLIP21■□□□□ 0.95
PHGDH-205ENST00000482968 DIP2AQ14689 1571 aa21■□□□□ 0.95
PHGDH-205ENST00000482968 PRAM1Q96QH2 718 aa21■□□□□ 0.95
PHGDH-205ENST00000482968 POGKQ9P215 609 aa21■□□□□ 0.95
PHGDH-205ENST00000482968 AMOTL2Q9Y2J4 779 aa21■□□□□ 0.95
PHGDH-205ENST00000482968 ARHGEF28Q8N1W1 1705 aaKnown RBP20.99■□□□□ 0.95
PHGDH-205ENST00000482968 PTPRUQ92729 1446 aa20.98■□□□□ 0.95
PHGDH-205ENST00000482968 WAPLQ7Z5K2 1190 aa20.98■□□□□ 0.95
PHGDH-205ENST00000482968 WASHC2AQ641Q2 1341 aa20.98■□□□□ 0.95
PHGDH-205ENST00000482968 POLR3GLQ9BT43 218 aa20.97■□□□□ 0.95
PHGDH-205ENST00000482968 TMF1P82094 1093 aa20.96■□□□□ 0.95
PHGDH-205ENST00000482968 STRCQ7RTU9 1775 aa20.95■□□□□ 0.94
PHGDH-205ENST00000482968 KIF7Q2M1P5 1343 aa20.95■□□□□ 0.94
PHGDH-205ENST00000482968 PIK3R4Q99570 1358 aa20.95■□□□□ 0.94
PHGDH-205ENST00000482968 QRICH2Q9H0J4 1663 aa20.94■□□□□ 0.94
PHGDH-205ENST00000482968 DLC1Q96QB1 1528 aa20.94■□□□□ 0.94
PHGDH-205ENST00000482968 CCDC7Q96M83 1385 aa20.93■□□□□ 0.94
PHGDH-205ENST00000482968 SIRT1Q96EB6 747 aa20.93■□□□□ 0.94
PHGDH-205ENST00000482968 ROBO2Q9HCK4 1378 aa20.93■□□□□ 0.94
PHGDH-205ENST00000482968 DISP3Q9P2K9 1392 aa20.93■□□□□ 0.94
PHGDH-205ENST00000482968 PLEKHH1Q9ULM0 1364 aa20.93■□□□□ 0.94
PHGDH-205ENST00000482968 TECPR2O15040 1411 aa20.93■□□□□ 0.94
PHGDH-205ENST00000482968 SLC24A1O60721 1099 aa20.92■□□□□ 0.94
PHGDH-205ENST00000482968 KCNA6P17658 529 aa20.92■□□□□ 0.94
PHGDH-205ENST00000482968 DDX10Q13206 875 aaKnown RBP20.92■□□□□ 0.94
PHGDH-205ENST00000482968 KNDC1Q76NI1 1749 aa20.92■□□□□ 0.94
PHGDH-205ENST00000482968 CHD2O14647 1828 aaKnown RBP20.92■□□□□ 0.94
PHGDH-205ENST00000482968 MINK1Q8N4C8 1332 aaPredicted RBP20.92■□□□□ 0.94
PHGDH-205ENST00000482968 SBNO2Q9Y2G9 1366 aa20.9■□□□□ 0.94
PHGDH-205ENST00000482968 FAM135BQ49AJ0 1406 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms