RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 EFCAB6Q5THR3 1501 aa17.86■□□□□ 0.45
TSPAN1-208ENST00000482928 CLTCQ00610 1675 aaKnown RBP17.86■□□□□ 0.45
TSPAN1-208ENST00000482928 ZMYM3Q14202 1370 aa17.85■□□□□ 0.45
TSPAN1-208ENST00000482928 ABCC3O15438 1527 aa17.84■□□□□ 0.45
TSPAN1-208ENST00000482928 CDK12Q9NYV4 1490 aaPredicted RBP17.84■□□□□ 0.45
TSPAN1-208ENST00000482928 ZNF772Q68DY9 489 aaPredicted RBP17.84■□□□□ 0.45
TSPAN1-208ENST00000482928 SPHKAPQ2M3C7 1700 aa17.83■□□□□ 0.44
TSPAN1-208ENST00000482928 A2ML1A8K2U0 1454 aa17.82■□□□□ 0.44
TSPAN1-208ENST00000482928 ROBO1Q9Y6N7 1651 aa17.81■□□□□ 0.44
TSPAN1-208ENST00000482928 LRP5O75197 1615 aa17.81■□□□□ 0.44
TSPAN1-208ENST00000482928 RXRBP28702 533 aa17.81■□□□□ 0.44
TSPAN1-208ENST00000482928 PPP1R15AO75807 674 aaPredicted RBP17.8■□□□□ 0.44
TSPAN1-208ENST00000482928 TRPM2O94759 1503 aa17.8■□□□□ 0.44
TSPAN1-208ENST00000482928 FAM135BQ49AJ0 1406 aa17.8■□□□□ 0.44
TSPAN1-208ENST00000482928 L3MBTL2Q969R5 705 aa17.79■□□□□ 0.44
TSPAN1-208ENST00000482928 IQGAP1P46940 1657 aa17.79■□□□□ 0.44
TSPAN1-208ENST00000482928 XIRP1Q702N8 1843 aaKnown RBP17.79■□□□□ 0.44
TSPAN1-208ENST00000482928 PHLPP1O60346 1717 aa17.76■□□□□ 0.43
TSPAN1-208ENST00000482928 MEX3CQ5U5Q3 659 aaKnown RBP17.76■□□□□ 0.43
TSPAN1-208ENST00000482928 NPHP4O75161 1426 aaPredicted RBP17.74■□□□□ 0.43
TSPAN1-208ENST00000482928 ARHGAP31Q2M1Z3 1444 aa17.74■□□□□ 0.43
TSPAN1-208ENST00000482928 LRP6O75581 1613 aa17.73■□□□□ 0.43
TSPAN1-208ENST00000482928 CLTCL1P53675 1640 aa17.72■□□□□ 0.43
TSPAN1-208ENST00000482928 JCADQ9P266 1359 aa17.72■□□□□ 0.43
TSPAN1-208ENST00000482928 RGL3Q3MIN7 710 aa17.72■□□□□ 0.43
TSPAN1-208ENST00000482928 ZNF326Q5BKZ1 582 aaKnown RBP17.71■□□□□ 0.43
TSPAN1-208ENST00000482928 DCAF11Q8TEB1 546 aa17.7■□□□□ 0.42
TSPAN1-208ENST00000482928 RGS12O14924 1447 aa17.7■□□□□ 0.42
TSPAN1-208ENST00000482928 KIF1BO60333 1816 aa17.7■□□□□ 0.42
TSPAN1-208ENST00000482928 MED14O60244 1454 aa17.69■□□□□ 0.42
TSPAN1-208ENST00000482928 ZNF316A6NFI3 1004 aaPredicted RBP17.69■□□□□ 0.42
TSPAN1-208ENST00000482928 NUTM2BA6NNL0 878 aaPredicted RBP17.69■□□□□ 0.42
TSPAN1-208ENST00000482928 NUTM2EB1AL46 878 aaPredicted RBP17.69■□□□□ 0.42
TSPAN1-208ENST00000482928 CHGAP10645 457 aaKnown RBP17.69■□□□□ 0.42
TSPAN1-208ENST00000482928 YY1P25490 414 aa17.69■□□□□ 0.42
TSPAN1-208ENST00000482928 NUTM2DQ5VT03 806 aaPredicted RBP17.69■□□□□ 0.42
TSPAN1-208ENST00000482928 ANKLE2Q86XL3 938 aa17.69■□□□□ 0.42
TSPAN1-208ENST00000482928 NUTM2AQ8IVF1 878 aaPredicted RBP17.69■□□□□ 0.42
TSPAN1-208ENST00000482928 KDM2AQ9Y2K7 1162 aa17.69■□□□□ 0.42
TSPAN1-208ENST00000482928 CFAP65Q6ZU64 1925 aaKnown RBP17.68■□□□□ 0.42
TSPAN1-208ENST00000482928 UGGT1Q9NYU2 1555 aa17.66■□□□□ 0.42
TSPAN1-208ENST00000482928 NOS1P29475 1434 aa17.65■□□□□ 0.42
TSPAN1-208ENST00000482928 SLC52A1Q9NWF4 448 aa17.64■□□□□ 0.41
TSPAN1-208ENST00000482928 ATAD2Q6PL18 1390 aa17.64■□□□□ 0.41
TSPAN1-208ENST00000482928 SPATA31E1Q6ZUB1 1445 aa17.64■□□□□ 0.41
TSPAN1-208ENST00000482928 ERVK-7P63135 1459 aa17.63■□□□□ 0.41
TSPAN1-208ENST00000482928 STAC3Q96MF2 364 aa17.63■□□□□ 0.41
TSPAN1-208ENST00000482928 STAG3Q9UJ98 1225 aa17.62■□□□□ 0.41
TSPAN1-208ENST00000482928 SENP3-EIF4A1A0A087X0R7 540 aa17.61■□□□□ 0.41
TSPAN1-208ENST00000482928 NBPF8Q3BBV2 869 aa17.6■□□□□ 0.41
TSPAN1-208ENST00000482928 SPATA31A6Q5VVP1 1343 aa17.6■□□□□ 0.41
TSPAN1-208ENST00000482928 PIK3C2BO00750 1634 aa17.59■□□□□ 0.41
TSPAN1-208ENST00000482928 COL16A1Q07092 1604 aaPredicted RBP17.59■□□□□ 0.41
TSPAN1-208ENST00000482928 ADGRB3O60242 1522 aa17.59■□□□□ 0.41
TSPAN1-208ENST00000482928 FBXO31Q5XUX0 539 aaPredicted RBP17.59■□□□□ 0.41
TSPAN1-208ENST00000482928 RALGAPBQ86X10 1494 aa17.57■□□□□ 0.4
TSPAN1-208ENST00000482928 PRAG1Q86YV5 1406 aa17.57■□□□□ 0.4
TSPAN1-208ENST00000482928 EIF4G2P78344 907 aaKnown RBP eCLIP17.57■□□□□ 0.4
TSPAN1-208ENST00000482928 RPGRIP1LQ68CZ1 1315 aa17.56■□□□□ 0.4
TSPAN1-208ENST00000482928 ROCK2O75116 1388 aaKnown RBP17.55■□□□□ 0.4
TSPAN1-208ENST00000482928 SHPRHQ149N8 1683 aa17.55■□□□□ 0.4
TSPAN1-208ENST00000482928 IDI1Q13907 227 aa17.55■□□□□ 0.4
TSPAN1-208ENST00000482928 TNRQ92752 1358 aa17.54■□□□□ 0.4
TSPAN1-208ENST00000482928 CARD11Q9BXL7 1154 aa17.54■□□□□ 0.4
TSPAN1-208ENST00000482928 MYOM2P54296 1465 aa17.53■□□□□ 0.4
TSPAN1-208ENST00000482928 NHSL1Q5SYE7 1610 aa17.53■□□□□ 0.4
TSPAN1-208ENST00000482928 TRPM1Q7Z4N2 1603 aa17.51■□□□□ 0.39
TSPAN1-208ENST00000482928 THEMISQ8N1K5 641 aaPredicted RBP17.51■□□□□ 0.39
TSPAN1-208ENST00000482928 IFT172Q9UG01 1749 aa17.51■□□□□ 0.39
TSPAN1-208ENST00000482928 HSPA5P11021 654 aaKnown RBP17.5■□□□□ 0.39
TSPAN1-208ENST00000482928 PPLO60437 1756 aa17.5■□□□□ 0.39
TSPAN1-208ENST00000482928 AFF2P51816 1311 aa17.49■□□□□ 0.39
TSPAN1-208ENST00000482928 VGFO15240 615 aaPredicted RBP17.49■□□□□ 0.39
TSPAN1-208ENST00000482928 RBM6P78332 1123 aaKnown RBP17.49■□□□□ 0.39
TSPAN1-208ENST00000482928 TMEM131LA2VDJ0 1609 aa17.49■□□□□ 0.39
TSPAN1-208ENST00000482928 USP47Q96K76 1375 aa17.48■□□□□ 0.39
TSPAN1-208ENST00000482928 HIRIP3Q9BW71 556 aaPredicted RBP17.47■□□□□ 0.39
TSPAN1-208ENST00000482928 NLRP1Q9C000 1473 aa17.47■□□□□ 0.39
TSPAN1-208ENST00000482928 HDGFP51858 240 aaKnown RBP17.46■□□□□ 0.39
TSPAN1-208ENST00000482928 MYO5BQ9ULV0 1848 aa17.46■□□□□ 0.39
TSPAN1-208ENST00000482928 NWD1Q149M9 1564 aa17.45■□□□□ 0.38
TSPAN1-208ENST00000482928 DIEXFQ68CQ4 756 aaKnown RBP17.45■□□□□ 0.38
TSPAN1-208ENST00000482928 LAMC1P11047 1609 aa17.45■□□□□ 0.38
TSPAN1-208ENST00000482928 NEXMIFQ5QGS0 1516 aa17.45■□□□□ 0.38
TSPAN1-208ENST00000482928 ADGRF5Q8IZF2 1346 aa17.45■□□□□ 0.38
TSPAN1-208ENST00000482928 KIAA1210Q9ULL0 1709 aa17.44■□□□□ 0.38
TSPAN1-208ENST00000482928 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.43■□□□□ 0.38
TSPAN1-208ENST00000482928 TMEM94Q12767 1356 aa17.42■□□□□ 0.38
TSPAN1-208ENST00000482928 GPRASP1Q5JY77 1395 aa17.42■□□□□ 0.38
TSPAN1-208ENST00000482928 NBPF1Q3BBV0 1214 aa17.42■□□□□ 0.38
TSPAN1-208ENST00000482928 CCDC125Q86Z20 511 aa17.42■□□□□ 0.38
TSPAN1-208ENST00000482928 NRXN1Q9ULB1 1477 aa17.42■□□□□ 0.38
TSPAN1-208ENST00000482928 KDM5AP29375 1690 aaKnown RBP17.42■□□□□ 0.38
TSPAN1-208ENST00000482928 RIMS2Q9UQ26 1411 aa17.41■□□□□ 0.38
TSPAN1-208ENST00000482928 QTRT2Q9H974 415 aaKnown RBP17.41■□□□□ 0.38
TSPAN1-208ENST00000482928 EIF3AQ14152 1382 aaKnown RBP17.4■□□□□ 0.38
TSPAN1-208ENST00000482928 EP400Q96L91 3159 aa17.4■□□□□ 0.38
TSPAN1-208ENST00000482928 PIK3C2GO75747 1445 aa17.4■□□□□ 0.38
TSPAN1-208ENST00000482928 ZFYVE9O95405 1425 aa17.4■□□□□ 0.38
TSPAN1-208ENST00000482928 CFAP70Q5T0N1 1121 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms