RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 WDR7Q9Y4E6 1490 aa20.07■□□□□ 0.8
DDR1-244ENST00000482873 ZFYVE16Q7Z3T8 1539 aa20.07■□□□□ 0.8
DDR1-244ENST00000482873 SLC24A1O60721 1099 aa20.07■□□□□ 0.8
DDR1-244ENST00000482873 PPP2R1AP30153 589 aa20.07■□□□□ 0.8
DDR1-244ENST00000482873 RTN4Q9NQC3 1192 aaKnown RBP20.07■□□□□ 0.8
DDR1-244ENST00000482873 ADGRL1O94910 1474 aa20.06■□□□□ 0.8
DDR1-244ENST00000482873 USP35Q9P2H5 1018 aa20.06■□□□□ 0.8
DDR1-244ENST00000482873 KANK1Q14678 1352 aa20.06■□□□□ 0.8
DDR1-244ENST00000482873 MS4A1P11836 297 aa20.05■□□□□ 0.8
DDR1-244ENST00000482873 WDR43Q15061 677 aaKnown RBP eCLIP20.04■□□□□ 0.8
DDR1-244ENST00000482873 AMER1Q5JTC6 1135 aaPredicted RBP20.04■□□□□ 0.8
DDR1-244ENST00000482873 ASXL2Q76L83 1435 aa20.03■□□□□ 0.8
DDR1-244ENST00000482873 TNNT2P45379 298 aaPredicted RBP20.03■□□□□ 0.8
DDR1-244ENST00000482873 CLTCL1P53675 1640 aa20.03■□□□□ 0.8
DDR1-244ENST00000482873 EIF5BO60841 1220 aaKnown RBP20.01■□□□□ 0.79
DDR1-244ENST00000482873 TMEM132EQ6IEE7 984 aa20.01■□□□□ 0.79
DDR1-244ENST00000482873 ATP7AQ04656 1500 aa20.01■□□□□ 0.79
DDR1-244ENST00000482873 EIF2AK4Q9P2K8 1649 aaKnown RBP20.01■□□□□ 0.79
DDR1-244ENST00000482873 RTEL1-TNFRSF6BF6WH68 1400 aa20.01■□□□□ 0.79
DDR1-244ENST00000482873 NPM1P06748 294 aaKnown RBP eCLIP20.01■□□□□ 0.79
DDR1-244ENST00000482873 C20orf194Q5TEA3 1177 aa20.01■□□□□ 0.79
DDR1-244ENST00000482873 TRAK1Q9UPV9 953 aa20.01■□□□□ 0.79
DDR1-244ENST00000482873 PDE3BQ13370 1112 aa20■□□□□ 0.79
DDR1-244ENST00000482873 WASHC2CQ9Y4E1 1318 aa20■□□□□ 0.79
DDR1-244ENST00000482873 MADDQ8WXG6 1647 aa19.99■□□□□ 0.79
DDR1-244ENST00000482873 PPM1GO15355 546 aaPredicted RBP19.99■□□□□ 0.79
DDR1-244ENST00000482873 SCAF11Q99590 1463 aaKnown RBP19.98■□□□□ 0.79
DDR1-244ENST00000482873 TRPM2O94759 1503 aa19.98■□□□□ 0.79
DDR1-244ENST00000482873 CRBNQ96SW2 442 aa19.98■□□□□ 0.79
DDR1-244ENST00000482873 CFAP65Q6ZU64 1925 aaKnown RBP19.98■□□□□ 0.79
DDR1-244ENST00000482873 PTPRTO14522 1441 aa19.98■□□□□ 0.79
DDR1-244ENST00000482873 RAPGEF3O95398 923 aa19.97■□□□□ 0.79
DDR1-244ENST00000482873 PLEKHH1Q9ULM0 1364 aa19.96■□□□□ 0.79
DDR1-244ENST00000482873 CARD14Q9BXL6 1004 aa19.96■□□□□ 0.79
DDR1-244ENST00000482873 CDCA8Q53HL2 280 aa19.95■□□□□ 0.78
DDR1-244ENST00000482873 SPHKAPQ2M3C7 1700 aa19.94■□□□□ 0.78
DDR1-244ENST00000482873 SAFB2Q14151 953 aaKnown RBP eCLIP19.94■□□□□ 0.78
DDR1-244ENST00000482873 CYB5RLQ6IPT4 315 aa19.94■□□□□ 0.78
DDR1-244ENST00000482873 LAMC1P11047 1609 aa19.93■□□□□ 0.78
DDR1-244ENST00000482873 APAF1O14727 1248 aa19.93■□□□□ 0.78
DDR1-244ENST00000482873 RNF17Q9BXT8 1623 aaKnown RBP19.93■□□□□ 0.78
DDR1-244ENST00000482873 SPINK5Q9NQ38 1064 aaPredicted RBP19.92■□□□□ 0.78
DDR1-244ENST00000482873 BLMP54132 1417 aaPredicted RBP19.92■□□□□ 0.78
DDR1-244ENST00000482873 NEUROD2Q15784 382 aa19.9■□□□□ 0.78
DDR1-244ENST00000482873 SLC12A5Q9H2X9 1139 aa19.9■□□□□ 0.78
DDR1-244ENST00000482873 NOS1P29475 1434 aa19.9■□□□□ 0.78
DDR1-244ENST00000482873 DDRGK1Q96HY6 314 aa19.89■□□□□ 0.78
DDR1-244ENST00000482873 SLC4A3P48751 1232 aa19.89■□□□□ 0.77
DDR1-244ENST00000482873 EIF3AQ14152 1382 aaKnown RBP19.89■□□□□ 0.77
DDR1-244ENST00000482873 INO80Q9ULG1 1556 aaPredicted RBP19.89■□□□□ 0.77
DDR1-244ENST00000482873 ABCA9Q8IUA7 1624 aa19.88■□□□□ 0.77
DDR1-244ENST00000482873 CEP152O94986 1710 aa19.88■□□□□ 0.77
DDR1-244ENST00000482873 DUSP27Q5VZP5 1158 aa19.88■□□□□ 0.77
DDR1-244ENST00000482873 DMRT2Q9Y5R5 561 aa19.88■□□□□ 0.77
DDR1-244ENST00000482873 TET3O43151 1660 aa19.87■□□□□ 0.77
DDR1-244ENST00000482873 IQGAP1P46940 1657 aa19.87■□□□□ 0.77
DDR1-244ENST00000482873 NFKBIBQ15653 356 aa19.87■□□□□ 0.77
DDR1-244ENST00000482873 GSE1Q14687 1217 aa19.87■□□□□ 0.77
DDR1-244ENST00000482873 BRPF3Q9ULD4 1205 aa19.87■□□□□ 0.77
DDR1-244ENST00000482873 GOLGA2Q08379 1002 aa19.86■□□□□ 0.77
DDR1-244ENST00000482873 CD109Q6YHK3 1445 aa19.86■□□□□ 0.77
DDR1-244ENST00000482873 DEPDC5O75140 1603 aa19.85■□□□□ 0.77
DDR1-244ENST00000482873 MROH1Q8NDA8 1641 aa19.85■□□□□ 0.77
DDR1-244ENST00000482873 ARAP3Q8WWN8 1544 aa19.85■□□□□ 0.77
DDR1-244ENST00000482873 RRP7AQ9Y3A4 280 aaKnown RBP19.85■□□□□ 0.77
DDR1-244ENST00000482873 ASXL1Q8IXJ9 1541 aa19.85■□□□□ 0.77
DDR1-244ENST00000482873 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.84■□□□□ 0.77
DDR1-244ENST00000482873 ERVK-7P63135 1459 aa19.84■□□□□ 0.77
DDR1-244ENST00000482873 CENPJQ9HC77 1338 aaPredicted RBP19.84■□□□□ 0.77
DDR1-244ENST00000482873 STAC3Q96MF2 364 aa19.83■□□□□ 0.76
DDR1-244ENST00000482873 STK26Q9P289 416 aa19.83■□□□□ 0.76
DDR1-244ENST00000482873 KDM2BQ8NHM5 1336 aa19.83■□□□□ 0.76
DDR1-244ENST00000482873 KIDINS220Q9ULH0 1771 aa19.82■□□□□ 0.76
DDR1-244ENST00000482873 BCAR3O75815 825 aa19.82■□□□□ 0.76
DDR1-244ENST00000482873 ZMYM4Q5VZL5 1548 aa19.82■□□□□ 0.76
DDR1-244ENST00000482873 VWDEQ8N2E2 1590 aa19.81■□□□□ 0.76
DDR1-244ENST00000482873 ABCA6Q8N139 1617 aa19.81■□□□□ 0.76
DDR1-244ENST00000482873 NPATQ14207 1427 aa19.81■□□□□ 0.76
DDR1-244ENST00000482873 PPRC1Q5VV67 1664 aaKnown RBP19.8■□□□□ 0.76
DDR1-244ENST00000482873 ZNF518AQ6AHZ1 1483 aa19.8■□□□□ 0.76
DDR1-244ENST00000482873 MORC1Q86VD1 984 aa19.79■□□□□ 0.76
DDR1-244ENST00000482873 FRAT1Q92837 279 aaPredicted RBP19.79■□□□□ 0.76
DDR1-244ENST00000482873 MROH2AA6NES4 1674 aa19.79■□□□□ 0.76
DDR1-244ENST00000482873 INSRP06213 1382 aa19.79■□□□□ 0.76
DDR1-244ENST00000482873 SLFN5Q08AF3 891 aa19.79■□□□□ 0.76
DDR1-244ENST00000482873 MAP3K4Q9Y6R4 1608 aa19.78■□□□□ 0.76
DDR1-244ENST00000482873 SYNMO15061 1565 aa19.78■□□□□ 0.76
DDR1-244ENST00000482873 EFCAB6Q5THR3 1501 aa19.78■□□□□ 0.76
DDR1-244ENST00000482873 DAXXQ9UER7 740 aaPredicted RBP19.78■□□□□ 0.76
DDR1-244ENST00000482873 CABP2Q9NPB3 220 aa19.78■□□□□ 0.76
DDR1-244ENST00000482873 MYOM1P52179 1685 aa19.77■□□□□ 0.76
DDR1-244ENST00000482873 ZNF521Q96K83 1311 aa19.77■□□□□ 0.76
DDR1-244ENST00000482873 C8orf34Q49A92 452 aa19.77■□□□□ 0.75
DDR1-244ENST00000482873 C14orf93Q9H972 538 aaKnown RBP19.76■□□□□ 0.75
DDR1-244ENST00000482873 NSD3Q9BZ95 1437 aa19.76■□□□□ 0.75
DDR1-244ENST00000482873 CENPQQ7L2Z9 268 aaPredicted RBP19.76■□□□□ 0.75
DDR1-244ENST00000482873 PKNOX2Q96KN3 472 aa19.75■□□□□ 0.75
DDR1-244ENST00000482873 FAM161AQ3B820 660 aa19.75■□□□□ 0.75
DDR1-244ENST00000482873 KIF1BO60333 1816 aa19.74■□□□□ 0.75
DDR1-244ENST00000482873 KDM5AP29375 1690 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms