RNA–Protein interactions for RNA: ENST00000482582.5

TRAIP-208, Transcript of TRAF interacting protein, humanhuman

TSL 5

Gene TRAIP, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-208ENST00000482582 MED1Q15648 1581 aaPredicted RBP17.3■□□□□ 0.36
TRAIP-208ENST00000482582 NPHP4O75161 1426 aaPredicted RBP17.3■□□□□ 0.36
TRAIP-208ENST00000482582 TOM1O60784 492 aa17.29■□□□□ 0.36
TRAIP-208ENST00000482582 UBR1Q8IWV7 1749 aa17.29■□□□□ 0.36
TRAIP-208ENST00000482582 KIF1BO60333 1816 aa17.27■□□□□ 0.36
TRAIP-208ENST00000482582 TMEM131LA2VDJ0 1609 aa17.27■□□□□ 0.36
TRAIP-208ENST00000482582 CPS1P31327 1500 aa17.26■□□□□ 0.35
TRAIP-208ENST00000482582 MED14O60244 1454 aa17.26■□□□□ 0.35
TRAIP-208ENST00000482582 CCDC144AA2RUR9 1427 aa17.26■□□□□ 0.35
TRAIP-208ENST00000482582 CHGAP10645 457 aaKnown RBP17.25■□□□□ 0.35
TRAIP-208ENST00000482582 LTKP29376 864 aa17.25■□□□□ 0.35
TRAIP-208ENST00000482582 ADGRB3O60242 1522 aa17.25■□□□□ 0.35
TRAIP-208ENST00000482582 KDM5AP29375 1690 aaKnown RBP17.24■□□□□ 0.35
TRAIP-208ENST00000482582 SIN3AQ96ST3 1273 aa17.24■□□□□ 0.35
TRAIP-208ENST00000482582 LRRC7Q96NW7 1537 aa17.24■□□□□ 0.35
TRAIP-208ENST00000482582 STAG3Q9UJ98 1225 aa17.23■□□□□ 0.35
TRAIP-208ENST00000482582 IQGAP1P46940 1657 aa17.21■□□□□ 0.35
TRAIP-208ENST00000482582 SPATA31E1Q6ZUB1 1445 aa17.21■□□□□ 0.34
TRAIP-208ENST00000482582 RGS17Q9UGC6 210 aaPredicted RBP17.2■□□□□ 0.34
TRAIP-208ENST00000482582 RGL3Q3MIN7 710 aa17.18■□□□□ 0.34
TRAIP-208ENST00000482582 CCER1Q8TC90 406 aaPredicted RBP17.18■□□□□ 0.34
TRAIP-208ENST00000482582 RBM33Q96EV2 1170 aaKnown RBP17.18■□□□□ 0.34
TRAIP-208ENST00000482582 ARHGAP23Q9P227 1491 aa17.18■□□□□ 0.34
TRAIP-208ENST00000482582 TMEM2Q9UHN6 1383 aa17.17■□□□□ 0.34
TRAIP-208ENST00000482582 SLIT1O75093 1534 aa17.17■□□□□ 0.34
TRAIP-208ENST00000482582 NEUROD1Q13562 356 aa17.17■□□□□ 0.34
TRAIP-208ENST00000482582 ZFYVE9O95405 1425 aa17.16■□□□□ 0.34
TRAIP-208ENST00000482582 ZNF326Q5BKZ1 582 aaKnown RBP17.16■□□□□ 0.34
TRAIP-208ENST00000482582 TXNDC2Q86VQ3 553 aa17.16■□□□□ 0.34
TRAIP-208ENST00000482582 RIMS2Q9UQ26 1411 aa17.15■□□□□ 0.34
TRAIP-208ENST00000482582 NUTM2DQ5VT03 806 aaPredicted RBP17.15■□□□□ 0.34
TRAIP-208ENST00000482582 XIRP1Q702N8 1843 aaKnown RBP17.14■□□□□ 0.34
TRAIP-208ENST00000482582 NEXMIFQ5QGS0 1516 aa17.14■□□□□ 0.33
TRAIP-208ENST00000482582 PPLO60437 1756 aa17.14■□□□□ 0.33
TRAIP-208ENST00000482582 IFT172Q9UG01 1749 aa17.13■□□□□ 0.33
TRAIP-208ENST00000482582 PHF23Q9BUL5 403 aaPredicted RBP17.13■□□□□ 0.33
TRAIP-208ENST00000482582 SCAF11Q99590 1463 aaKnown RBP17.12■□□□□ 0.33
TRAIP-208ENST00000482582 CLSPNQ9HAW4 1339 aa17.11■□□□□ 0.33
TRAIP-208ENST00000482582 RPGRIP1LQ68CZ1 1315 aa17.1■□□□□ 0.33
TRAIP-208ENST00000482582 SLC26A8Q96RN1 970 aa17.09■□□□□ 0.33
TRAIP-208ENST00000482582 EID1Q9Y6B2 187 aa17.09■□□□□ 0.33
TRAIP-208ENST00000482582 L3MBTL2Q969R5 705 aa17.08■□□□□ 0.32
TRAIP-208ENST00000482582 ADGRF5Q8IZF2 1346 aa17.07■□□□□ 0.32
TRAIP-208ENST00000482582 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.07■□□□□ 0.32
TRAIP-208ENST00000482582 DCAF11Q8TEB1 546 aa17.07■□□□□ 0.32
TRAIP-208ENST00000482582 PPP1R15AO75807 674 aaPredicted RBP17.06■□□□□ 0.32
TRAIP-208ENST00000482582 HDGFP51858 240 aaKnown RBP17.06■□□□□ 0.32
TRAIP-208ENST00000482582 KDM2AQ9Y2K7 1162 aa17.06■□□□□ 0.32
TRAIP-208ENST00000482582 POTEAQ6S8J7 498 aa17.05■□□□□ 0.32
TRAIP-208ENST00000482582 PLEKHG1Q9ULL1 1385 aa17.04■□□□□ 0.32
TRAIP-208ENST00000482582 NRXN3Q9Y4C0 1643 aa17.04■□□□□ 0.32
TRAIP-208ENST00000482582 VGFO15240 615 aaPredicted RBP17.04■□□□□ 0.32
TRAIP-208ENST00000482582 TMEM94Q12767 1356 aa17.03■□□□□ 0.32
TRAIP-208ENST00000482582 MYOM2P54296 1465 aa17.02■□□□□ 0.32
TRAIP-208ENST00000482582 NRXN1Q9ULB1 1477 aa17.02■□□□□ 0.32
TRAIP-208ENST00000482582 TONSLQ96HA7 1378 aa17.02■□□□□ 0.31
TRAIP-208ENST00000482582 ADAMTS13Q76LX8 1427 aa17.01■□□□□ 0.31
TRAIP-208ENST00000482582 KCNA6P17658 529 aa17■□□□□ 0.31
TRAIP-208ENST00000482582 PROSER2Q86WR7 435 aaPredicted RBP17■□□□□ 0.31
TRAIP-208ENST00000482582 BCANQ96GW7 911 aa17■□□□□ 0.31
TRAIP-208ENST00000482582 SETBP1Q9Y6X0 1596 aa17■□□□□ 0.31
TRAIP-208ENST00000482582 PIK3C2GO75747 1445 aa16.99■□□□□ 0.31
TRAIP-208ENST00000482582 SETD1AO15047 1707 aaKnown RBP16.99■□□□□ 0.31
TRAIP-208ENST00000482582 FAM135BQ49AJ0 1406 aa16.98■□□□□ 0.31
TRAIP-208ENST00000482582 STAC3Q96MF2 364 aa16.97■□□□□ 0.31
TRAIP-208ENST00000482582 PRAG1Q86YV5 1406 aa16.96■□□□□ 0.31
TRAIP-208ENST00000482582 NBPF8Q3BBV2 869 aa16.96■□□□□ 0.31
TRAIP-208ENST00000482582 CFAP70Q5T0N1 1121 aa16.96■□□□□ 0.31
TRAIP-208ENST00000482582 TBX22Q9Y458 520 aa16.96■□□□□ 0.31
TRAIP-208ENST00000482582 ROBO1Q9Y6N7 1651 aa16.94■□□□□ 0.3
TRAIP-208ENST00000482582 METP08581 1390 aa16.94■□□□□ 0.3
TRAIP-208ENST00000482582 C14orf93Q9H972 538 aaKnown RBP16.94■□□□□ 0.3
TRAIP-208ENST00000482582 TIMELESSQ9UNS1 1208 aa16.94■□□□□ 0.3
TRAIP-208ENST00000482582 DIP2AQ14689 1571 aa16.94■□□□□ 0.3
TRAIP-208ENST00000482582 CHD2O14647 1828 aaKnown RBP16.93■□□□□ 0.3
TRAIP-208ENST00000482582 ASXL1Q8IXJ9 1541 aa16.92■□□□□ 0.3
TRAIP-208ENST00000482582 TMEM132EQ6IEE7 984 aa16.92■□□□□ 0.3
TRAIP-208ENST00000482582 PTPRUQ92729 1446 aa16.91■□□□□ 0.3
TRAIP-208ENST00000482582 LAMC1P11047 1609 aa16.9■□□□□ 0.3
TRAIP-208ENST00000482582 TRPM1Q7Z4N2 1603 aa16.9■□□□□ 0.3
TRAIP-208ENST00000482582 NBPF1Q3BBV0 1214 aa16.9■□□□□ 0.3
TRAIP-208ENST00000482582 SLAIN2Q9P270 581 aa16.9■□□□□ 0.3
TRAIP-208ENST00000482582 KIAA1210Q9ULL0 1709 aa16.9■□□□□ 0.3
TRAIP-208ENST00000482582 ADGRB1O14514 1584 aa16.89■□□□□ 0.29
TRAIP-208ENST00000482582 PIK3R4Q99570 1358 aa16.87■□□□□ 0.29
TRAIP-208ENST00000482582 NWD1Q149M9 1564 aa16.86■□□□□ 0.29
TRAIP-208ENST00000482582 AMOTL2Q9Y2J4 779 aa16.86■□□□□ 0.29
TRAIP-208ENST00000482582 XRN1Q8IZH2 1706 aaKnown RBP16.86■□□□□ 0.29
TRAIP-208ENST00000482582 STK26Q9P289 416 aa16.85■□□□□ 0.29
TRAIP-208ENST00000482582 YTHDC2Q9H6S0 1430 aaKnown RBP16.84■□□□□ 0.29
TRAIP-208ENST00000482582 LRP6O75581 1613 aa16.83■□□□□ 0.28
TRAIP-208ENST00000482582 LRPPRCP42704 1394 aaKnown RBP16.83■□□□□ 0.28
TRAIP-208ENST00000482582 PHLPP1O60346 1717 aa16.82■□□□□ 0.28
TRAIP-208ENST00000482582 RALGAPBQ86X10 1494 aa16.82■□□□□ 0.28
TRAIP-208ENST00000482582 MSH6P52701 1360 aa16.82■□□□□ 0.28
TRAIP-208ENST00000482582 NKTRP30414 1462 aaKnown RBP16.81■□□□□ 0.28
TRAIP-208ENST00000482582 ROCK2O75116 1388 aaKnown RBP16.8■□□□□ 0.28
TRAIP-208ENST00000482582 GPRASP1Q5JY77 1395 aa16.8■□□□□ 0.28
TRAIP-208ENST00000482582 ABCC11Q96J66 1382 aa16.8■□□□□ 0.28
TRAIP-208ENST00000482582 ROBO2Q9HCK4 1378 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms