RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 ST20-MTHFSA0A0A6YYL1 179 aa16.26■□□□□ 0.19
GGPS1-205ENST00000482013 CCER2I3L3R5 266 aa16.26■□□□□ 0.19
GGPS1-205ENST00000482013 ERVK-7P63135 1459 aa16.25■□□□□ 0.19
GGPS1-205ENST00000482013 SLC24A1O60721 1099 aa16.24■□□□□ 0.19
GGPS1-205ENST00000482013 SCAF11Q99590 1463 aaKnown RBP16.23■□□□□ 0.19
GGPS1-205ENST00000482013 SPATA31D1Q6ZQQ2 1576 aa16.23■□□□□ 0.19
GGPS1-205ENST00000482013 SETBP1Q9Y6X0 1596 aa16.23■□□□□ 0.19
GGPS1-205ENST00000482013 ZFYVE9O95405 1425 aa16.23■□□□□ 0.19
GGPS1-205ENST00000482013 CENPBP07199 599 aaPredicted RBP16.23■□□□□ 0.19
GGPS1-205ENST00000482013 VGFO15240 615 aaPredicted RBP16.22■□□□□ 0.19
GGPS1-205ENST00000482013 IDI1Q13907 227 aa16.22■□□□□ 0.19
GGPS1-205ENST00000482013 TMEM131LA2VDJ0 1609 aa16.21■□□□□ 0.19
GGPS1-205ENST00000482013 CHGAP10645 457 aaKnown RBP16.21■□□□□ 0.19
GGPS1-205ENST00000482013 TRHP20396 242 aaPredicted RBP16.21■□□□□ 0.19
GGPS1-205ENST00000482013 ADGRF5Q8IZF2 1346 aa16.2■□□□□ 0.18
GGPS1-205ENST00000482013 ESF1Q9H501 851 aaKnown RBP16.2■□□□□ 0.18
GGPS1-205ENST00000482013 EIF3AQ14152 1382 aaKnown RBP16.2■□□□□ 0.18
GGPS1-205ENST00000482013 PIK3C2GO75747 1445 aa16.19■□□□□ 0.18
GGPS1-205ENST00000482013 NEXMIFQ5QGS0 1516 aa16.19■□□□□ 0.18
GGPS1-205ENST00000482013 TESK2Q96S53 571 aa16.18■□□□□ 0.18
GGPS1-205ENST00000482013 C14orf93Q9H972 538 aaKnown RBP16.18■□□□□ 0.18
GGPS1-205ENST00000482013 MYO5BQ9ULV0 1848 aa16.17■□□□□ 0.18
GGPS1-205ENST00000482013 TMF1P82094 1093 aa16.17■□□□□ 0.18
GGPS1-205ENST00000482013 ZMYM3Q14202 1370 aa16.16■□□□□ 0.18
GGPS1-205ENST00000482013 CDCA8Q53HL2 280 aa16.15■□□□□ 0.18
GGPS1-205ENST00000482013 CFAP70Q5T0N1 1121 aa16.15■□□□□ 0.18
GGPS1-205ENST00000482013 FBXO31Q5XUX0 539 aaPredicted RBP16.15■□□□□ 0.18
GGPS1-205ENST00000482013 MYO3AQ8NEV4 1616 aa16.15■□□□□ 0.18
GGPS1-205ENST00000482013 KDM5AP29375 1690 aaKnown RBP16.14■□□□□ 0.18
GGPS1-205ENST00000482013 MLECQ14165 292 aa16.14■□□□□ 0.17
GGPS1-205ENST00000482013 SBNO2Q9Y2G9 1366 aa16.12■□□□□ 0.17
GGPS1-205ENST00000482013 PRKRIP1Q9H875 184 aaPredicted RBP16.11■□□□□ 0.17
GGPS1-205ENST00000482013 ADGRB1O14514 1584 aa16.11■□□□□ 0.17
GGPS1-205ENST00000482013 KTN1Q86UP2 1357 aaKnown RBP16.11■□□□□ 0.17
GGPS1-205ENST00000482013 A2ML1A8K2U0 1454 aa16.1■□□□□ 0.17
GGPS1-205ENST00000482013 STAG3Q9UJ98 1225 aa16.09■□□□□ 0.17
GGPS1-205ENST00000482013 DISP3Q9P2K9 1392 aa16.09■□□□□ 0.17
GGPS1-205ENST00000482013 POLR3GLQ9BT43 218 aa16.08■□□□□ 0.16
GGPS1-205ENST00000482013 TNRQ92752 1358 aa16.08■□□□□ 0.16
GGPS1-205ENST00000482013 HDGFP51858 240 aaKnown RBP16.07■□□□□ 0.16
GGPS1-205ENST00000482013 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.07■□□□□ 0.16
GGPS1-205ENST00000482013 YTHDC1Q96MU7 727 aaKnown RBP16.07■□□□□ 0.16
GGPS1-205ENST00000482013 PHF23Q9BUL5 403 aaPredicted RBP16.06■□□□□ 0.16
GGPS1-205ENST00000482013 FER1L4A9Z1Z3 1794 aa16.05■□□□□ 0.16
GGPS1-205ENST00000482013 NLRP1Q9C000 1473 aa16.05■□□□□ 0.16
GGPS1-205ENST00000482013 CENPJQ9HC77 1338 aaPredicted RBP16.04■□□□□ 0.16
GGPS1-205ENST00000482013 PUS7Q96PZ0 661 aaKnown RBP16.04■□□□□ 0.16
GGPS1-205ENST00000482013 RIMS2Q9UQ26 1411 aa16.03■□□□□ 0.16
GGPS1-205ENST00000482013 C3P01024 1663 aa16.02■□□□□ 0.16
GGPS1-205ENST00000482013 ALKQ9UM73 1620 aa16.02■□□□□ 0.16
GGPS1-205ENST00000482013 RALBP1Q15311 655 aa16.02■□□□□ 0.16
GGPS1-205ENST00000482013 UBR1Q8IWV7 1749 aa16.02■□□□□ 0.15
GGPS1-205ENST00000482013 ARHGEF28Q8N1W1 1705 aaKnown RBP16.02■□□□□ 0.15
GGPS1-205ENST00000482013 QRICH2Q9H0J4 1663 aa16.02■□□□□ 0.15
GGPS1-205ENST00000482013 PER1O15534 1290 aaPredicted RBP16.01■□□□□ 0.15
GGPS1-205ENST00000482013 TRAK1Q9UPV9 953 aa15.99■□□□□ 0.15
GGPS1-205ENST00000482013 NUTM2DQ5VT03 806 aaPredicted RBP15.98■□□□□ 0.15
GGPS1-205ENST00000482013 TMEM132EQ6IEE7 984 aa15.98■□□□□ 0.15
GGPS1-205ENST00000482013 ASXL1Q8IXJ9 1541 aa15.98■□□□□ 0.15
GGPS1-205ENST00000482013 PANK3Q9H999 370 aa15.97■□□□□ 0.15
GGPS1-205ENST00000482013 MYOM1P52179 1685 aa15.97■□□□□ 0.15
GGPS1-205ENST00000482013 DLC1Q96QB1 1528 aa15.97■□□□□ 0.15
GGPS1-205ENST00000482013 SETD1AO15047 1707 aaKnown RBP15.97■□□□□ 0.15
GGPS1-205ENST00000482013 YTHDC2Q9H6S0 1430 aaKnown RBP15.96■□□□□ 0.15
GGPS1-205ENST00000482013 TMEM2Q9UHN6 1383 aa15.96■□□□□ 0.15
GGPS1-205ENST00000482013 NPC1L1Q9UHC9 1359 aa15.95■□□□□ 0.14
GGPS1-205ENST00000482013 MYBBP1AQ9BQG0 1328 aaKnown RBP15.94■□□□□ 0.14
GGPS1-205ENST00000482013 MRS2Q9HD23 443 aa15.94■□□□□ 0.14
GGPS1-205ENST00000482013 PARD3Q8TEW0 1356 aa15.94■□□□□ 0.14
GGPS1-205ENST00000482013 EVC2Q86UK5 1308 aa15.94■□□□□ 0.14
GGPS1-205ENST00000482013 BRD4O60885 1362 aaPredicted RBP15.93■□□□□ 0.14
GGPS1-205ENST00000482013 LRPPRCP42704 1394 aaKnown RBP15.93■□□□□ 0.14
GGPS1-205ENST00000482013 NRXN3Q9Y4C0 1643 aa15.93■□□□□ 0.14
GGPS1-205ENST00000482013 ADAMTSL3P82987 1691 aa15.92■□□□□ 0.14
GGPS1-205ENST00000482013 PTPRMP28827 1452 aa15.92■□□□□ 0.14
GGPS1-205ENST00000482013 SIRT1Q96EB6 747 aa15.92■□□□□ 0.14
GGPS1-205ENST00000482013 SLIT1O75093 1534 aa15.92■□□□□ 0.14
GGPS1-205ENST00000482013 ARHGAP23Q9P227 1491 aa15.91■□□□□ 0.14
GGPS1-205ENST00000482013 ABCC11Q96J66 1382 aa15.91■□□□□ 0.14
GGPS1-205ENST00000482013 KNSTRNQ9Y448 316 aa15.91■□□□□ 0.14
GGPS1-205ENST00000482013 CEBPAP49715 358 aaPredicted RBP15.9■□□□□ 0.14
GGPS1-205ENST00000482013 KNDC1Q76NI1 1749 aa15.9■□□□□ 0.14
GGPS1-205ENST00000482013 PLEKHG1Q9ULL1 1385 aa15.89■□□□□ 0.13
GGPS1-205ENST00000482013 NINLQ9Y2I6 1382 aa15.89■□□□□ 0.13
GGPS1-205ENST00000482013 THEMISQ8N1K5 641 aaPredicted RBP15.89■□□□□ 0.13
GGPS1-205ENST00000482013 RIMS1Q86UR5 1692 aaKnown RBP15.89■□□□□ 0.13
GGPS1-205ENST00000482013 CCDC184Q52MB2 194 aa15.88■□□□□ 0.13
GGPS1-205ENST00000482013 NLRP13Q86W25 1043 aa15.88■□□□□ 0.13
GGPS1-205ENST00000482013 EID1Q9Y6B2 187 aa15.88■□□□□ 0.13
GGPS1-205ENST00000482013 TULP4Q9NRJ4 1543 aa15.88■□□□□ 0.13
GGPS1-205ENST00000482013 SETD1BQ9UPS6 1966 aaKnown RBP15.87■□□□□ 0.13
GGPS1-205ENST00000482013 TMC1Q8TDI8 760 aa15.87■□□□□ 0.13
GGPS1-205ENST00000482013 POGKQ9P215 609 aa15.87■□□□□ 0.13
GGPS1-205ENST00000482013 TECPR2O15040 1411 aa15.86■□□□□ 0.13
GGPS1-205ENST00000482013 FAM135BQ49AJ0 1406 aa15.86■□□□□ 0.13
GGPS1-205ENST00000482013 AMER1Q5JTC6 1135 aaPredicted RBP15.86■□□□□ 0.13
GGPS1-205ENST00000482013 STK26Q9P289 416 aa15.86■□□□□ 0.13
GGPS1-205ENST00000482013 ATAD2Q6PL18 1390 aa15.85■□□□□ 0.13
GGPS1-205ENST00000482013 MED14O60244 1454 aa15.84■□□□□ 0.13
GGPS1-205ENST00000482013 USP32Q8NFA0 1604 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 230.4 ms