RNA–Protein interactions for RNA: ENST00000482000.1

PRKCB-206, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-206ENST00000482000 TMUB1Q9BVT8 246 aa9.28□□□□□ -0.92
PRKCB-206ENST00000482000 GPBP1L1Q9HC44 474 aaPredicted RBP9.28□□□□□ -0.92
PRKCB-206ENST00000482000 WDR62O43379 1518 aa9.27□□□□□ -0.93
PRKCB-206ENST00000482000 NBPF26B4DH59 902 aa9.27□□□□□ -0.93
PRKCB-206ENST00000482000 TK2O00142 265 aa9.27□□□□□ -0.93
PRKCB-206ENST00000482000 PARP9Q8IXQ6 854 aa9.27□□□□□ -0.93
PRKCB-206ENST00000482000 KDM4CQ9H3R0 1056 aa9.27□□□□□ -0.93
PRKCB-206ENST00000482000 PNMA3Q9UL41 463 aa9.27□□□□□ -0.93
PRKCB-206ENST00000482000 MRC2Q9UBG0 1479 aa9.27□□□□□ -0.93
PRKCB-206ENST00000482000 REPIN1Q9BWE0 567 aaKnown RBP9.26□□□□□ -0.93
PRKCB-206ENST00000482000 PRDM2Q13029 1718 aa9.25□□□□□ -0.93
PRKCB-206ENST00000482000 RCCD1A6NED2 376 aa9.25□□□□□ -0.93
PRKCB-206ENST00000482000 BHMG1C9JSJ3 638 aaPredicted RBP9.25□□□□□ -0.93
PRKCB-206ENST00000482000 LSM11P83369 360 aaKnown RBP eCLIP9.25□□□□□ -0.93
PRKCB-206ENST00000482000 CFTRP13569 1480 aa9.24□□□□□ -0.93
PRKCB-206ENST00000482000 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.24□□□□□ -0.93
PRKCB-206ENST00000482000 SMAPO00193 183 aa9.24□□□□□ -0.93
PRKCB-206ENST00000482000 CLCN1P35523 988 aa9.24□□□□□ -0.93
PRKCB-206ENST00000482000 MDM2Q00987 491 aaPredicted RBP9.24□□□□□ -0.93
PRKCB-206ENST00000482000 TTLL12Q14166 644 aaPredicted RBP9.24□□□□□ -0.93
PRKCB-206ENST00000482000 GPCPD1Q9NPB8 672 aa9.24□□□□□ -0.93
PRKCB-206ENST00000482000 FANCD2Q9BXW9 1451 aa9.23□□□□□ -0.93
PRKCB-206ENST00000482000 CEP164Q9UPV0 1460 aa9.23□□□□□ -0.93
PRKCB-206ENST00000482000 NLRP7Q8WX94 980 aa9.23□□□□□ -0.93
PRKCB-206ENST00000482000 ADGRD1Q6QNK2 874 aa9.22□□□□□ -0.93
PRKCB-206ENST00000482000 GIGYF2Q6Y7W6 1299 aaKnown RBP9.22□□□□□ -0.93
PRKCB-206ENST00000482000 HRO43593 1189 aa9.21□□□□□ -0.94
PRKCB-206ENST00000482000 DNAJB2P25686 324 aa9.21□□□□□ -0.94
PRKCB-206ENST00000482000 POTEGQ6S5H5 508 aa9.21□□□□□ -0.94
PRKCB-206ENST00000482000 KRTAP3-3Q9BYR6 98 aa9.21□□□□□ -0.94
PRKCB-206ENST00000482000 KRTAP3-2Q9BYR7 98 aa9.21□□□□□ -0.94
PRKCB-206ENST00000482000 POTEMA6NI47 508 aa9.2□□□□□ -0.94
PRKCB-206ENST00000482000 TMEM134Q9H6X4 195 aa9.2□□□□□ -0.94
PRKCB-206ENST00000482000 DAXXQ9UER7 740 aaPredicted RBP9.2□□□□□ -0.94
PRKCB-206ENST00000482000 SEPT9Q9UHD8 586 aaPredicted RBP9.2□□□□□ -0.94
PRKCB-206ENST00000482000 MS4A1P11836 297 aa9.19□□□□□ -0.94
PRKCB-206ENST00000482000 TMEM132AQ24JP5 1023 aa9.19□□□□□ -0.94
PRKCB-206ENST00000482000 ANKRD13DQ6ZTN6 518 aa9.19□□□□□ -0.94
PRKCB-206ENST00000482000 LAPTM4BQ86VI4 370 aa9.19□□□□□ -0.94
PRKCB-206ENST00000482000 FAM217BQ9NTX9 383 aaPredicted RBP9.19□□□□□ -0.94
PRKCB-206ENST00000482000 SSTR3P32745 418 aaPredicted RBP9.18□□□□□ -0.94
PRKCB-206ENST00000482000 FAM98CQ17RN3 349 aaKnown RBP9.18□□□□□ -0.94
PRKCB-206ENST00000482000 FAM117AQ9C073 453 aa9.18□□□□□ -0.94
PRKCB-206ENST00000482000 NBPF3Q9H094 633 aa9.18□□□□□ -0.94
PRKCB-206ENST00000482000 URB2Q14146 1524 aaKnown RBP9.17□□□□□ -0.94
PRKCB-206ENST00000482000 CDAN1Q8IWY9 1227 aa9.17□□□□□ -0.94
PRKCB-206ENST00000482000 CCDC88BA6NC98 1476 aa9.16□□□□□ -0.94
PRKCB-206ENST00000482000 IL27Q8NEV9 243 aa9.16□□□□□ -0.94
PRKCB-206ENST00000482000 MRPL50Q8N5N7 158 aaKnown RBP9.15□□□□□ -0.94
PRKCB-206ENST00000482000 PLEKHG3A1L390 1219 aa9.14□□□□□ -0.95
PRKCB-206ENST00000482000 SWT1Q5T5J6 900 aaKnown RBP9.14□□□□□ -0.95
PRKCB-206ENST00000482000 DDRGK1Q96HY6 314 aa9.14□□□□□ -0.95
PRKCB-206ENST00000482000 ZFRQ96KR1 1074 aaKnown RBP9.14□□□□□ -0.95
PRKCB-206ENST00000482000 HDGFP51858 240 aaKnown RBP9.12□□□□□ -0.95
PRKCB-206ENST00000482000 SAMD7Q7Z3H4 446 aa9.12□□□□□ -0.95
PRKCB-206ENST00000482000 SULF1Q8IWU6 871 aa9.12□□□□□ -0.95
PRKCB-206ENST00000482000 CD46P15529 392 aa9.11□□□□□ -0.95
PRKCB-206ENST00000482000 BEGAINQ9BUH8 593 aa9.11□□□□□ -0.95
PRKCB-206ENST00000482000 DDX11L8A8MPP1 907 aa9.1□□□□□ -0.95
PRKCB-206ENST00000482000 STAC3Q96MF2 364 aa9.1□□□□□ -0.95
PRKCB-206ENST00000482000 SLC10A3P09131 477 aa9.08□□□□□ -0.96
PRKCB-206ENST00000482000 TOPBP1Q92547 1522 aa9.07□□□□□ -0.96
PRKCB-206ENST00000482000 RSPH4AQ5TD94 716 aa9.07□□□□□ -0.96
PRKCB-206ENST00000482000 SLF2Q8IX21 1173 aa9.07□□□□□ -0.96
PRKCB-206ENST00000482000 GOLGA8CPA6NN73 597 aa9.06□□□□□ -0.96
PRKCB-206ENST00000482000 GOPCQ9HD26 462 aa9.06□□□□□ -0.96
PRKCB-206ENST00000482000 DNMBPQ6XZF7 1577 aa9.05□□□□□ -0.96
PRKCB-206ENST00000482000 SLC4A3P48751 1232 aa9.05□□□□□ -0.96
PRKCB-206ENST00000482000 RDH13Q8NBN7 331 aa9.05□□□□□ -0.96
PRKCB-206ENST00000482000 LRCH3Q96II8 777 aa9.05□□□□□ -0.96
PRKCB-206ENST00000482000 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.05□□□□□ -0.96
PRKCB-206ENST00000482000 ZNF608Q9ULD9 1512 aaPredicted RBP9.05□□□□□ -0.96
PRKCB-206ENST00000482000 IFT140Q96RY7 1462 aa9.04□□□□□ -0.96
PRKCB-206ENST00000482000 SOWAHBA6NEL2 793 aa9.04□□□□□ -0.96
PRKCB-206ENST00000482000 GCGRP47871 477 aa9.04□□□□□ -0.96
PRKCB-206ENST00000482000 ANKK1Q8NFD2 765 aa9.04□□□□□ -0.96
PRKCB-206ENST00000482000 WNT2BQ93097 391 aa9.04□□□□□ -0.96
PRKCB-206ENST00000482000 PCDH10Q9P2E7 1040 aa9.04□□□□□ -0.96
PRKCB-206ENST00000482000 SPIRE2Q8WWL2 714 aa9.03□□□□□ -0.96
PRKCB-206ENST00000482000 TBC1D2Q9BYX2 928 aa9.03□□□□□ -0.96
PRKCB-206ENST00000482000 RSPH6AQ9H0K4 717 aa9.03□□□□□ -0.96
PRKCB-206ENST00000482000 EIF4G3O43432 1585 aaKnown RBP9.03□□□□□ -0.96
PRKCB-206ENST00000482000 ABCC8Q09428 1581 aa9.03□□□□□ -0.96
PRKCB-206ENST00000482000 TARBP1Q13395 1621 aaKnown RBP9.02□□□□□ -0.96
PRKCB-206ENST00000482000 DIXDC1Q155Q3 683 aa9.02□□□□□ -0.97
PRKCB-206ENST00000482000 SH3D19Q5HYK7 790 aa9.02□□□□□ -0.97
PRKCB-206ENST00000482000 BCAMP50895 628 aa9.01□□□□□ -0.97
PRKCB-206ENST00000482000 SKIV2LQ15477 1246 aaKnown RBP9.01□□□□□ -0.97
PRKCB-206ENST00000482000 MYSM1Q5VVJ2 828 aa9.01□□□□□ -0.97
PRKCB-206ENST00000482000 RNF40O75150 1001 aa9□□□□□ -0.97
PRKCB-206ENST00000482000 KDM4AO75164 1064 aa9□□□□□ -0.97
PRKCB-206ENST00000482000 NUTM1Q86Y26 1132 aa9□□□□□ -0.97
PRKCB-206ENST00000482000 NECTIN2Q92692 538 aa9□□□□□ -0.97
PRKCB-206ENST00000482000 PPP4CP60510 307 aa8.99□□□□□ -0.97
PRKCB-206ENST00000482000 TSR3Q9UJK0 312 aaKnown RBP8.99□□□□□ -0.97
PRKCB-206ENST00000482000 POLA1P09884 1462 aaPredicted RBP8.98□□□□□ -0.97
PRKCB-206ENST00000482000 CHD1O14646 1710 aa8.98□□□□□ -0.97
PRKCB-206ENST00000482000 CFHP08603 1231 aa8.98□□□□□ -0.97
PRKCB-206ENST00000482000 THSD4Q6ZMP0 1018 aa8.98□□□□□ -0.97
PRKCB-206ENST00000482000 HPS5Q9UPZ3 1129 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms