RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 ZNF697Q5TEC3 545 aa6.47□□□□□ -1.37
USH2A-204ENST00000481786 S1PR4O95977 384 aa6.45□□□□□ -1.38
USH2A-204ENST00000481786 OSBPP22059 807 aa6.45□□□□□ -1.38
USH2A-204ENST00000481786 PLA2G2CQ5R387 149 aa6.45□□□□□ -1.38
USH2A-204ENST00000481786 PADI6Q6TGC4 694 aa6.44□□□□□ -1.38
USH2A-204ENST00000481786 CERKQ8TCT0 537 aa6.44□□□□□ -1.38
USH2A-204ENST00000481786 PCDHB3Q9Y5E6 796 aa6.44□□□□□ -1.38
USH2A-204ENST00000481786 SLF2Q8IX21 1173 aa6.43□□□□□ -1.38
USH2A-204ENST00000481786 TTC13Q8NBP0 860 aa6.43□□□□□ -1.38
USH2A-204ENST00000481786 NPDC1Q9NQX5 325 aaPredicted RBP6.43□□□□□ -1.38
USH2A-204ENST00000481786 LCE2CQ5TA81 110 aa6.42□□□□□ -1.38
USH2A-204ENST00000481786 ANKLE1Q8NAG6 615 aa6.42□□□□□ -1.38
USH2A-204ENST00000481786 SPDYE16A6NNV3 312 aaPredicted RBP6.41□□□□□ -1.38
USH2A-204ENST00000481786 WFS1O76024 890 aa6.41□□□□□ -1.38
USH2A-204ENST00000481786 EYA1Q99502 592 aa6.41□□□□□ -1.38
USH2A-204ENST00000481786 GMPR2Q9P2T1 348 aaKnown RBP6.41□□□□□ -1.38
USH2A-204ENST00000481786 FOXC1Q12948 553 aa6.4□□□□□ -1.38
USH2A-204ENST00000481786 NFX1Q12986 1120 aaKnown RBP6.4□□□□□ -1.38
USH2A-204ENST00000481786 PKD2L1Q9P0L9 805 aa6.4□□□□□ -1.38
USH2A-204ENST00000481786 DCAF8L2P0C7V8 631 aa6.39□□□□□ -1.39
USH2A-204ENST00000481786 RBM27Q9P2N5 1060 aaKnown RBP6.39□□□□□ -1.39
USH2A-204ENST00000481786 NECTIN2Q92692 538 aa6.37□□□□□ -1.39
USH2A-204ENST00000481786 C11orf95C9JLR9 678 aaPredicted RBP6.36□□□□□ -1.39
USH2A-204ENST00000481786 STK17AQ9UEE5 414 aa6.36□□□□□ -1.39
USH2A-204ENST00000481786 LOC100996750A0A140TA64 210 aa6.34□□□□□ -1.39
USH2A-204ENST00000481786 WIPF1O43516 503 aa6.34□□□□□ -1.39
USH2A-204ENST00000481786 AMER1Q5JTC6 1135 aaPredicted RBP6.34□□□□□ -1.39
USH2A-204ENST00000481786 KRTAP4-6Q9BYQ5 205 aa6.34□□□□□ -1.39
USH2A-204ENST00000481786 RTN4Q9NQC3 1192 aaKnown RBP6.34□□□□□ -1.39
USH2A-204ENST00000481786 ACTN4O43707 911 aaKnown RBP6.33□□□□□ -1.4
USH2A-204ENST00000481786 ADH1BP00325 375 aa6.33□□□□□ -1.4
USH2A-204ENST00000481786 FAM161AQ3B820 660 aa6.33□□□□□ -1.4
USH2A-204ENST00000481786 CRIPAKQ8N1N5 446 aa6.33□□□□□ -1.4
USH2A-204ENST00000481786 PRR14Q9BWN1 585 aa6.33□□□□□ -1.4
USH2A-204ENST00000481786 SLC6A16Q9GZN6 736 aa6.33□□□□□ -1.4
USH2A-204ENST00000481786 AVPP01185 164 aa6.32□□□□□ -1.4
USH2A-204ENST00000481786 CFHP08603 1231 aa6.32□□□□□ -1.4
USH2A-204ENST00000481786 SLC10A3P09131 477 aa6.32□□□□□ -1.4
USH2A-204ENST00000481786 E2F4Q16254 413 aa6.32□□□□□ -1.4
USH2A-204ENST00000481786 TOR4AQ9NXH8 423 aa6.32□□□□□ -1.4
USH2A-204ENST00000481786 AXIN1O15169 862 aa6.31□□□□□ -1.4
USH2A-204ENST00000481786 SNRPBP14678 240 aaKnown RBP6.31□□□□□ -1.4
USH2A-204ENST00000481786 SLC4A3P48751 1232 aa6.3□□□□□ -1.4
USH2A-204ENST00000481786 PUS10Q3MIT2 529 aaKnown RBP6.3□□□□□ -1.4
USH2A-204ENST00000481786 ARIH1Q9Y4X5 557 aaPredicted RBP6.3□□□□□ -1.4
USH2A-204ENST00000481786 INSM1Q01101 510 aaPredicted RBP6.29□□□□□ -1.4
USH2A-204ENST00000481786 SCUBE3Q8IX30 993 aa6.29□□□□□ -1.4
USH2A-204ENST00000481786 TMEM134Q9H6X4 195 aa6.29□□□□□ -1.4
USH2A-204ENST00000481786 RCCD1A6NED2 376 aa6.28□□□□□ -1.4
USH2A-204ENST00000481786 DNAJB2P25686 324 aa6.28□□□□□ -1.4
USH2A-204ENST00000481786 KMT5BQ4FZB7 885 aa6.28□□□□□ -1.4
USH2A-204ENST00000481786 TERTO14746 1132 aaKnown RBP6.27□□□□□ -1.41
USH2A-204ENST00000481786 CYP4X1Q8N118 509 aa6.27□□□□□ -1.41
USH2A-204ENST00000481786 ADGRG1Q9Y653 693 aa6.27□□□□□ -1.41
USH2A-204ENST00000481786 NR1I2O75469 434 aa6.26□□□□□ -1.41
USH2A-204ENST00000481786 SPSB2Q99619 263 aa6.26□□□□□ -1.41
USH2A-204ENST00000481786 MLLT3P42568 568 aaPredicted RBP6.25□□□□□ -1.41
USH2A-204ENST00000481786 SMCPP49901 116 aaPredicted RBP6.25□□□□□ -1.41
USH2A-204ENST00000481786 LMOD2Q6P5Q4 547 aa6.25□□□□□ -1.41
USH2A-204ENST00000481786 FCF1Q9Y324 198 aaKnown RBP6.25□□□□□ -1.41
USH2A-204ENST00000481786 LORP23490 312 aaPredicted RBP6.24□□□□□ -1.41
USH2A-204ENST00000481786 CTC1Q2NKJ3 1217 aa6.24□□□□□ -1.41
USH2A-204ENST00000481786 ATP13A2Q9NQ11 1180 aa6.24□□□□□ -1.41
USH2A-204ENST00000481786 SMPD1P17405 629 aa6.23□□□□□ -1.41
USH2A-204ENST00000481786 RPIAP49247 311 aa6.23□□□□□ -1.41
USH2A-204ENST00000481786 PTGDRQ13258 359 aa6.23□□□□□ -1.41
USH2A-204ENST00000481786 RBM46Q8TBY0 533 aaKnown RBP6.23□□□□□ -1.41
USH2A-204ENST00000481786 PRDM9Q9NQV7 894 aa6.23□□□□□ -1.41
USH2A-204ENST00000481786 TTC24A2A3L6 582 aaPredicted RBP6.22□□□□□ -1.41
USH2A-204ENST00000481786 FAM160A2Q8N612 972 aaPredicted RBP6.22□□□□□ -1.41
USH2A-204ENST00000481786 J3QL48 77 aa6.21□□□□□ -1.42
USH2A-204ENST00000481786 CD2BP2O95400 341 aaKnown RBP6.21□□□□□ -1.42
USH2A-204ENST00000481786 THAP11Q96EK4 314 aa6.2□□□□□ -1.42
USH2A-204ENST00000481786 TRIM47Q96LD4 638 aa6.2□□□□□ -1.42
USH2A-204ENST00000481786 HPS1Q92902 700 aa6.19□□□□□ -1.42
USH2A-204ENST00000481786 WDR70Q9NW82 654 aa6.19□□□□□ -1.42
USH2A-204ENST00000481786 GMPRP36959 345 aa6.18□□□□□ -1.42
USH2A-204ENST00000481786 VEGFBP49765 207 aa6.17□□□□□ -1.42
USH2A-204ENST00000481786 MORN1Q5T089 497 aa6.17□□□□□ -1.42
USH2A-204ENST00000481786 SUZ12Q15022 739 aaKnown RBP6.16□□□□□ -1.42
USH2A-204ENST00000481786 BBXQ8WY36 941 aaPredicted RBP6.16□□□□□ -1.42
USH2A-204ENST00000481786 MRGPRX2Q96LB1 330 aa6.16□□□□□ -1.42
USH2A-204ENST00000481786 SLC27A5Q9Y2P5 690 aa6.16□□□□□ -1.42
USH2A-204ENST00000481786 WNT7AO00755 349 aa6.15□□□□□ -1.42
USH2A-204ENST00000481786 FUT2Q10981 343 aa6.15□□□□□ -1.42
USH2A-204ENST00000481786 SNIP1Q8TAD8 396 aaKnown RBP6.15□□□□□ -1.42
USH2A-204ENST00000481786 PXYLP1Q8TE99 480 aa6.15□□□□□ -1.42
USH2A-204ENST00000481786 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.14□□□□□ -1.43
USH2A-204ENST00000481786 NUTM2FA1L443 756 aa6.14□□□□□ -1.43
USH2A-204ENST00000481786 ZSCAN1Q8NBB4 408 aa6.14□□□□□ -1.43
USH2A-204ENST00000481786 SENP2Q9HC62 589 aa6.14□□□□□ -1.43
USH2A-204ENST00000481786 RNF19BQ6ZMZ0 732 aa6.13□□□□□ -1.43
USH2A-204ENST00000481786 SPRYD3Q8NCJ5 442 aa6.13□□□□□ -1.43
USH2A-204ENST00000481786 NLRP7Q8WX94 980 aa6.13□□□□□ -1.43
USH2A-204ENST00000481786 ERBB4Q15303 1308 aa6.13□□□□□ -1.43
USH2A-204ENST00000481786 ZBTB24O43167 697 aaPredicted RBP6.12□□□□□ -1.43
USH2A-204ENST00000481786 TRIM32Q13049 653 aa6.12□□□□□ -1.43
USH2A-204ENST00000481786 BRICD5Q6PL45 260 aa6.12□□□□□ -1.43
USH2A-204ENST00000481786 NXF1Q9UBU9 619 aaKnown RBP6.12□□□□□ -1.43
USH2A-204ENST00000481786 FMNL1O95466 1100 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms